Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0343000 |
| Transcript ID | LotjaGi6g1v0343000.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutamyl-tRNA (Gln) amidotransferase subunit A; TAIR: AT4G34880.2 Amidase family protein; Swiss-Prot: sp|Q9URY4|YI01_SCHPO Putative amidase C869.01; TrEMBL-Plants: tr|A0A072U452|A0A072U452_MEDTR Amidase C869.01-like protein, putative; Found in the gene: LotjaGi6g1v0343000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:65591686..65599718) extracted from Lotus japonicus Gifu genome v1.2.
GTGATTTTGTGTGTTAGAGTGGTAACTGTAGAATAACCAGTAGTAAATAAAGCAAATAACGCATCGTTCCGCAGAGCTAC ACCGGGAGCGTGAATCCATTGGTTAGCTCAAAAAGGTTCATTTTTACAGTCTTACAGGAGCAAATCTCATTTGGTTGATC TTCACTCTTTGATTTGGTTTTTGCTTTCTAGTATTTTGATTTTATTACTTGCATACCCCATGATGATTCTTGGTTGGTGT AGGACTCTGTAGGGGCATCAATGAAGAGAAGACATAATGCCAGAAGCAGAATGAGAGATGTACTTTCCCTCTAAAAAGGT ATGCAGTCAAAGTTTAGGCTAGAACTGCTTTCAAGTTGCATTTGTAGACAAGTGAAATTGATTTATATTGCCTGTTACTG GGGCAGCATTCCAATTTTTGTTATAGTCCTAGTCTGTTAAATAAATGTTGTTCCTAGAATAGTGATTATGATATCCAACA GTTTCACAATTCCAGGATTACATTAAGCATTGTCCATTCCTGCCTTTTGGAAATGCTTTTCAAAGGCTGCATACTCATCA GCTGCAGGCAAAGCGTTTTAGATGTAGCCTATATATAATTGTGTATAACATTTTAAATTTGGTTTATTTTCTGACAACAT TTGATGTAGCCTAAATTTGATCCATGTAACAGACCTCACTCAGTAGGATAAGGGTTTTGTTATTGTTGTATAACAACACT ATGGCCTATCTTCCTTGGGGATTTGTTACACTCACAAAATTGATGGAGCCCTCTCCATTCACCTTAGTCTGCCTTTGAAT GAAATCAACGAATGCGGGGTACCCTGGGGTTGGAAGATTAACAGTCTCATTGCTTAGCATTGAAACTACAGTAGTCATTG TTGGCCTGTCTCTTGCAAGTTCTTGTACACACAAAAGGCCAATATGGATGCATCTAATAATATCTGCATGAGAGCTAGAA TTTGATATTTCTGGATCAATTAGAGATGCATTGTTGTCATCATTCCACAGCTTCCATGCCTACAAACATCAACAACATGA TCTAGTAAAACTTCAAAGTCAAAATCATATCAGGAAGAGTAAATATAGCTTTTGGAAATGATGTAACTAACTGTAGAGGC TTACAAATCCTAAAAGGCTCAAAGATTCAGCATCCTTAGAAAAACTGCTATTTTTTCTCCTGCTGACAATCTCAAGCAGT AAAACACCAAAGCTGAAGACATCAGACTTCTCTGAAAATAGCCCTTGCGTGGCGTATTCTGGGGACATATAACCACTGTA TAATAATTGAGGTTAGTTTTCATAGCTCAGTTTAATAATACAATCTTAGACAAAAAGGACAAAGGATCCTCACTATGTTC CAACAACCCTTTCAGTGCTGGCCTGATCTACACCGCAACCAAAAATCCTTGCCATACCAAAGTCTGATATTTTTGGATTC AGCTCTTCATCCAACAATACATTACTTAACTTCAGGTCTCTATGGATAATTCTTAGCCTAGAGTCTCTATGAAGGTAAAG TAGACCCCGAGCAATTCCTTCAATTATATTAAAACGTTTTTCCCAACTTATTCCCTTTTTATGAGGACCTGGTATAGATA ACAGCAAAAGGGTGAGCATAAAGCATCTCAGCAGAATCAATCTCGATTTGTCAACACCCAAAAATTACCAACACTCACCA TACACCATATATATCACATCTATCACTTATCTCATTTATCATGGAAACCAAAAATAAATTAAATCTAACAAGTAAGAAAT TTGTACATTTAAAAGCGTCATTCTCACCTTGATTTTAGTATAGGATCATATCATAATCATATAAGAAAAAGGAGATGATG AGAACTAACCAAACATATATGCATCCAAACTTATGTTTGGCATGTACTCATAGATCAAAATCTTTTCGTCTCCTTCCACA CAACATCCAAAAAGTCTGACAAGGTTACGATGTTGAAGCTTTGATATTACCACAACCTCATTCATAAATTCTTCTAGCCC TTGTCTAGATGTTGTTGAAAGTCTTTTAACTGCTACTTCCTGTCCATCTTCCAATATACCCTGAAAAAAAGTTTCAAGTG GGAGCAATGAAACTCTTGATTTGTGGGATTATGAAATTCACTGTGATTTTAATACCTTGTAAACTGGTCCAAAACCACCT TGCCCAAGCTTATTATCTGAGTGAAAGTTGTTTGTTGCAGTAGAAAGATCTTCAAACACAAATTGGGAAAGGTCCGGGAA TCTAAACTCTTTACTCAAGGCATTTACATGGCTTTTGCTCTGAATTGTCAGATTTCTTTTCTCTGTATTGAAATATCAAC AATCTGCAAATTATTCTTCATAGAAAAAATATATGTATAATTGTAATACAACACTACTTATGATACTTTTTGTAAATTAC ATATACTATATATGCATGTCTTTTAACTAGGTGACTAACTTGAGGCCTCACATCAGAAGAAATAGATGGTTGCTTAATAA TACACAAGCTTCAAGTAAACAAAATACCACACAGGAGCACCTTTGTGCTGGACTTGAACTGAATTGTAAAAAATAAATAA TAGGAAATGCAACAAGGAACCAAAAGTGGATGAAACCCAGTTATGGTTTTAGATTTTCAACAAACAAAATGAAAATACCA AATTAATAGGAAGGAAACCACAAAGTGGATGTCAAAGTATATAAAAAGTACAAAAGAACATGGAGAAATGAATGTTTTCA CCAGCAGTACAATGACATATTACCTGCTTTTCTAGTCCTTTTCCTCAAGACATATCCACATGCCACAATTAGAATTGTTC CTATTATCGCTGTAACTGCGATAATAGCTGTTACATTCTTCTTATTTTCATCTGTTACCAAAAGTTCAAGACAAAGTCAT CCTACAGTCTGCGTGTAAAATACTCAAAATTGAGTAATCATTCATTGAAAAGAAACAAATAACTTACCAAGTTCTGAATA GGGAACCCTGATGTAAAGATCAGTTCCTTCAGTTGAGAACCTTTGTATGTCAATTAAGTCTGAAATCCATATCATACAAC CGATGCCAGCATCAAACGCATATGCTAAACAAGAGCAGTTTTGCAAGCACTGAGTTCTGCAAACATCATAAAAAGTAGAA GACCGCTGGACAAAGTCTGGAACTTTGGTGTTCCGGAGCTTCACAAACCCATCATCCTTGTTTCCAGCTTCACTCCCATT TGTTACTCTCTCACACTTCAAAGGTTCCTTCCTAACACATCCACCGGTCCAGTTTTGTCTATCCCATTCCTCTGGATCTC TTGGCTCATATCCTGTCAAACAGCTGCAGATAGGTGAACTTCTAGGATTGCAGCTTCCAAACACTCCACATGTGCCATAA ACATCACACTCGGATTTTGGAACTGACCATTCGATAAACCAATTTCTCTTTGCAAAATCCCAGTCAAATTTGTATGTGGT TCCTTGATAATCCAACACATATGTTGTCAACTTAGACTGGTTTGAATAGGTATAAGTGACATAATAACTGCCATCCCCAT CATCTGGCAGACCCAACTTAAATCCATCAAGGTAATTATTTTCCATGTCAGGTATTCCAAGAAAGGTTTGACCGTTCCAC GGACCACTTCGCCAATATGGTTTATTTCCTCTCCAGGTGAAAACTTCAGGGATTTCTAGGCGTTCAGGACCCATAGAGAA GTTTCCAATGGATGGATCCTGAGGACTTTTCCATGAGGTGACTTTCATTCTAGTTTTATCTGAATAAAGCTTCATTTTCT CCAACAATGTATCACAAGGGTGCTCAAAACTCTGCCACACCCTCCTTCCTGTAGTTCTTTCTTGCAGTACAAGGTTGCCA GTGTTTAGTAGCCTAGCCATTGTAGTCAATGCATTATTGGACACATTTGTTGACCAGAGAACTTCTTGCTGTCCATTCAC CAGAACAAGATTTCCACCCTCGAATATTTTGACTGTCCCAGAAGAATCATTCAGTGGTTGGTTTCTATTAGCTACCCACA CCACAGGGGGTTTAGACATGCACCATATTCCCAGGTAGTAAAAGGTTGAGTTTTCAGGGGTGAAGAATCCAAAGTGAAAG AAACCGTTACTGGAGCTTAAAGTTTCAGGGTCCTTGAGGACATAGGATGATGTGATGGTGTCTAGGGAAGTGCCGACATG AATGCACAAACAGAAAAGTACTAGATAAATGGGTATCTCTATGAACTTAAACTGACTGAACCACATGATGAGATGAATTT GATTTTGTTGTTTGGTTTGGAGATTTTGGCAGATTTTACCCTTCACTAGTATGATCTTTATCTTAGTTTTGACACATGCC ACCCTTCATTATTTTCCAAAATGGTTTGACAGCACTCTCAGCCCTGCCTCCCAATTATCTTTTTGAGTTCTGAATATCAT TTTGCTGATAACAAAGGAATGTCTATTTTTGCACAAACCTTATTCTTGTTTGGGAAGCAAGTTAAGCTGTTTCTAAGTAG ATGTACCAATTATTCTAAAAGTTTAAGCTTTTGGGTAAAAGACTTCCACTTGGGCTTGAAGCGTAGATAATGCATAGGTC TACTTATGACTTGTTGAAATTTAACTTTTTATTAGAATAATGGTGGCAACAAGAATAACTCTAAACCACTTAGTCATAGA GACTCTAATACAAGTCATGAACCAATTATCCCAAAACCAAATAATAGGTAAAAGACTCAGGAATTATTATATTTCTAAGA AGAACTTGTCAATTTGTGATGAGGTAGGATAGCTGATAAGTTTAAATAACATGTATTCAAAGTCCACAGTTCCTTTATTT TTTTTATGATGTATTTGGTTGCATCATAATACAAGTTTTTTCATGCAAAGACCAATTCTTATGAAAATTTATGTTTAAAT ATAATTCAAGAATGCGAATAAATGAATTGGCACACTGGTCAGACCTTTCACATTGCAAAATTGTACCAAAATTGTTAAAG TTAAGAACAAATTCAATCTTTAGGTACTTTGCCTAAACAATAATTTACCCTTCTATGTATAAAATTAGTATGGAAACAGT GTTATATATAAGTACTTTTTAAAGTTATTTCATTAAGTTAATAAAATTTAATGGCCAGATTATAATGATTCCACATGAAA TGAGTTGCCATTTATCCATATGCTATCATTGCACAATAAGTACGGCTTGCAATAGAAAGAAAAAGAAAGTGGACTAGAGA TCAAGCAGAAAGTCAAGTTTGAAAAAATAAGCTCTCATGGCTTCATCACGAGGTTTCTCTTTGCTGCAGTTCCTTTTTCT TATCCCTCTATGCATATTCTATTTGCTACCAACCACTTGTGGCACAGGATTCACAATCAAGGAGGCCAGTGTGCATGATC TCCAACTTGCTTTCCGCAGAAACCAGTTAACCTCTAGGCAACTTGTTGAGTTCTACCTTAAACAAATACAAACCCAGAAC TCAGTACTCAAAGGGGTCTTGGAGGTGAACCCTGATGCACTAGCACAAGCAGACATAGCTGACCAAGAGAGAAGAAGGGC TAAGTCACCTGAGTCTCTTTCAGGTCTACATGGAATACCTATTCTGCTTAAGGATAGCATTGCTACTAAGGATAAGCTCA ACACCACTGCAGGCTCTTTTGCACTGCTTGGCTCTGTGGTGCCTAGAGATGCAGGTGTAGTTGCCAGGTTAAGGAAAGCT GGGGCTATCATATTAGGAAAGGCCAGCCTCAGCGAGTGGGCACATTTCAGGTCCGGGGGAGCACCTAGTAGTTGGAGCGC CAGAGGTGGAGAAGGGAAGGTAACTAATTTACTTTCTAAGTTAATTTTGGTGAAATTGATTATAGTAAAAGTGAGTTGAA AGCAAACTGACTTATCTTTGGATACATTTTTTTTTTGGAAAATGGATTATTGGATACATATATGAAATAGTGATTTTCAT TGGATAATGTTATGGAATTCAATTTTAAAAGTCTCACGTTAACTAGAGATATGATCAAATAAGTGTTTATAAATGGTAGA GCAACCCTCACCTGTAAGCTAGTTTTTGGGGTAAATTTTGGCATAACCTAAATTCTAATAGTGTTCAACGCGAAAGTTAC TTTTCTAACTTCTATCAATATTGATTCTAGGGTTTCCCAACAGCAATGGGAAACCAAACACAGTCTAAGTTAATATTCAA TCTGAGCTTGGTCTTGCTTTTCAAGTTGGGTATATCTCAGTAGGAAATTTAACTCATAGCATTGCTCTCATCCAGGAGGT TGGTTATTCCATATTTGATAGATGTATATATCAATCGTTGTGAAGTCATGGGAAGTAATAGTTGTATGATCTTTGGAAAT CCTTCTATAATGGATTTCTCGGAGAAGCTTTTGTGATTAGCTTCTTGTCACAATTGATTTTGAGGAAATAGAAGCTGATC CATACATGTTAGAAAATAGAGAGTTGACATGTGCTTTATGTTCTGCAGAATCCTTACACAATGGGAAATCCCTGCGGGTC CAGCAGTGGATCAGCAATATCAGTAGCAGCAAATTTGGTGACAGTGTCACTTGGTACTGAGACTGATGGCTCCATTTTAT GCCCTTCAGATGCTAACTCAGTAGTGGGGATCAAACCAACAGTTGGTCTCACTAGTAGAGCAGGGGTAGTTCCAGTCAGT CCAAGACAAGACTCTATTGGGTAAGTTTATTGCAATGGCTCCATTTTCTTGATATAAACGCCGTTAGCAAGCACAATCTC CTCAGTGCATGTTTAGAAATTCTCCTACAACTGATTCAAAACTCAAAATCAATTTTTCGGAGAAGCTTCTATGAGTAGCT TGTGGGTGCCAGCATTGATTATGAGAACCATGCAAAAGCCATTTCACCTCAACAAGTGTCTAACTTTGTGTTGGCTGGGA CAGACCAATTTGCAGGACCGTAGCAGATGCTGCTCTTGTTCTTGAAACCATTGCAGGCATCGACACTAATGATAAGGCAA CAATTCAAGCATCAAAGTATATCCCAAAAGGTGGCTATGCTCAATTTCTTAAGACAGATGGACTAAGGGGTAAAAGATTG GGAATAGTGAGATTGTTCTATGATTTTGGAAATGATACTTTTCTACATGAAACTTATAAGTCACACTTCAAAAAATTAAG GTAACAAAAGTAACTATTTTTCATTTTTTTGCCAACTATTACTGCTGGTGAAGCTTTAGTAAGTCTTGTGCATTTGCTAC AACTCAGGCGAAATGGTGCAGTTTTGGTTGACAATTTGAAGATAGATAAAATTGATGAAATTCTCAGTCAGTCAAGTGAA TTTATTGCTTTGTATTTTGAATTCAAGTTATCCTTGAACGCATACCTGAAAGACCTGGTAGCTTCCCCAGTGAGAAGTTT AGCCAATGTGATAGCCTTCAACAAGAAGCACCCAAAATTGGTGAGTATGTGAGAACGGCACTATTGTTTATTTGTTTATG GGTAACATAGCTTTTAGTAACTTAACATTGGTATGGAAATTGCAGGAGAAATTTGATGAGTACGGTCAAGATCTCTTGGA GCGAGCTGAAAAGACCAATGGAATGGGTAAAGAAGAAGAACAGGCATTATTAAACATGACAAGATTGTCACAAAATGGAT TTGAGAAACTAATGAAAAAAAATAAACTTGATGCAGTGGTAATACCTTCTTACCTCTTCAGTAGCATACTTGCTATTGGA GGTTATCCTGGAGTAATTGTTCCAGCAGGATACAAAGAGGGTGTGCCATTTGGAATTTCCTTTGGAGGTTTGAAAGGTTC AGAGCCAAAGCTGATTGAAATTGCTTATTCCTTTGAGCAAGCAACTAAGATCAGGAAGCCTCCTCCACTTAGAAAGTTGA AAATTTGAAGTTATGTTTGACAGATAAAATAAATAAAGAAGTTTGACAGAATAAGGAAGTAGTTGTTGTATAAAATAAAG TGGTATGAATCTCTTCACTAACACTCAATATAAAAAAGGTCTGAAAAAATTGTGGCAATGAGGTTCAAACTTCAAAGTAA TCATCAATTTGACTTTTGATATGTTCATTTAAA
CDS sequence (LotjaGi6g1v0343000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCATCACGAGGTTTCTCTTTGCTGCAGTTCCTTTTTCTTATCCCTCTATGCATATTCTATTTGCTACCAACCAC TTGTGGCACAGGATTCACAATCAAGGAGGCCAGTGTGCATGATCTCCAACTTGCTTTCCGCAGAAACCAGTTAACCTCTA GGCAACTTGTTGAGTTCTACCTTAAACAAATACAAACCCAGAACTCAGTACTCAAAGGGGTCTTGGAGGTGAACCCTGAT GCACTAGCACAAGCAGACATAGCTGACCAAGAGAGAAGAAGGGCTAAGTCACCTGAGTCTCTTTCAGGTCTACATGGAAT ACCTATTCTGCTTAAGGATAGCATTGCTACTAAGGATAAGCTCAACACCACTGCAGGCTCTTTTGCACTGCTTGGCTCTG TGGTGCCTAGAGATGCAGGTGTAGTTGCCAGGTTAAGGAAAGCTGGGGCTATCATATTAGGAAAGGCCAGCCTCAGCGAG TGGGCACATTTCAGGTCCGGGGGAGCACCTAGTAGTTGGAGCGCCAGAGGTGGAGAAGGGAAGAATCCTTACACAATGGG AAATCCCTGCGGGTCCAGCAGTGGATCAGCAATATCAGTAGCAGCAAATTTGGTGACAGTGTCACTTGGTACTGAGACTG ATGGCTCCATTTTATGCCCTTCAGATGCTAACTCAGTAGTGGGGATCAAACCAACAGTTGGTCTCACTAGTAGAGCAGGG GTAGTTCCAGTCAGTCCAAGACAAGACTCTATTGGACCAATTTGCAGGACCGTAGCAGATGCTGCTCTTGTTCTTGAAAC CATTGCAGGCATCGACACTAATGATAAGGCAACAATTCAAGCATCAAAGTATATCCCAAAAGGTGGCTATGCTCAATTTC TTAAGACAGATGGACTAAGGGGTAAAAGATTGGGAATAGTGAGATTGTTCTATGATTTTGGAAATGATACTTTTCTACAT GAAACTTATAAGTCACACTTCAAAAAATTAAGGCGAAATGGTGCAGTTTTGGTTGACAATTTGAAGATAGATAAAATTGA TGAAATTCTCAGTCAGTCAAGTGAATTTATTGCTTTGTATTTTGAATTCAAGTTATCCTTGAACGCATACCTGAAAGACC TGGTAGCTTCCCCAGTGAGAAGTTTAGCCAATGTGATAGCCTTCAACAAGAAGCACCCAAAATTGGAGAAATTTGATGAG TACGGTCAAGATCTCTTGGAGCGAGCTGAAAAGACCAATGGAATGGGTAAAGAAGAAGAACAGGCATTATTAAACATGAC AAGATTGTCACAAAATGGATTTGAGAAACTAATGAAAAAAAATAAACTTGATGCAGTGGTAATACCTTCTTACCTCTTCA GTAGCATACTTGCTATTGGAGGTTATCCTGGAGTAATTGTTCCAGCAGGATACAAAGAGGGTGTGCCATTTGGAATTTCC TTTGGAGGTTTGAAAGGTTCAGAGCCAAAGCTGATTGAAATTGCTTATTCCTTTGAGCAAGCAACTAAGATCAGGAAGCC TCCTCCACTTAGAAAGTTGAAAATTTGA
Protein sequence (LotjaGi6g1v0343000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASSRGFSLLQFLFLIPLCIFYLLPTTCGTGFTIKEASVHDLQLAFRRNQLTSRQLVEFYLKQIQTQNSVLKGVLEVNPD ALAQADIADQERRRAKSPESLSGLHGIPILLKDSIATKDKLNTTAGSFALLGSVVPRDAGVVARLRKAGAIILGKASLSE WAHFRSGGAPSSWSARGGEGKNPYTMGNPCGSSSGSAISVAANLVTVSLGTETDGSILCPSDANSVVGIKPTVGLTSRAG VVPVSPRQDSIGPICRTVADAALVLETIAGIDTNDKATIQASKYIPKGGYAQFLKTDGLRGKRLGIVRLFYDFGNDTFLH ETYKSHFKKLRRNGAVLVDNLKIDKIDEILSQSSEFIALYFEFKLSLNAYLKDLVASPVRSLANVIAFNKKHPKLEKFDE YGQDLLERAEKTNGMGKEEEQALLNMTRLSQNGFEKLMKKNKLDAVVIPSYLFSSILAIGGYPGVIVPAGYKEGVPFGIS FGGLKGSEPKLIEIAYSFEQATKIRKPPPLRKLKI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | - | – | |
| Phobius | 1 | 29 | 29 | - | – | |
| SignalP_EUK | 1 | 29 | 29 | - | – | |
| PANTHER | 8 | 513 | 506 | 1.4E-280 | – | |
| PANTHER | 8 | 513 | 506 | 1.4E-280 | – | |
| Phobius | 9 | 24 | 16 | - | – | |
| TMHMM | 12 | 34 | 23 | - | – | |
| Phobius | 25 | 29 | 5 | - | – | |
| Gene3D | 26 | 510 | 485 | 7.7E-169 | ||
| Phobius | 30 | 515 | 486 | - | – | |
| SUPERFAMILY | 34 | 510 | 477 | 2.62E-96 | ||
| Pfam | 56 | 450 | 395 | 1.3E-70 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0343000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…