Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0362000 |
| Transcript ID | LotjaGi6g1v0362000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT1G60940.1 SNF1-related protein kinase 2.10; Swiss-Prot: sp|Q9C958|SRK2B_ARATH Serine/threonine-protein kinase SRK2B; TrEMBL-Plants: tr|I3SRU6|I3SRU6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0362000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:67401126..67404215) extracted from Lotus japonicus Gifu genome v1.2.
AAAAGCAATTGGAGTGCGTGCAGTGCAAATCACGTTTTATCTCTCTCTTCACTTCTTCCCCAGACAACCCCACCCCTCTG CTCTGCGATTCATTCAATTCAACACTTGTTTTTATTTTAATCCCAAATAAATATAATAATCATAATCCCGAATAATTAGT AGTAAATAATCACAGAAATTTGGTTGGAATATCATAAATTGATTCACCACCACCTTTACCCCTTTATTTATTCTCTCTCA ATTTGGGGTTCTCTTCTCTCTCTCAGTAGAACGGTGCATGTGAATTCAGGCAGCGATGGACAAGTACGAGCTGTTGAAGG ATATAGGATCTGGAAACTTCGGTGTCGCCAGGCTCATGCGCCACAAAGAAACCAAAGAGCTTGTCGCCATGAAATACATT GAACGCGGTCTCAAGGTTCAACTTCATCTCTTTTCTTTTTGATAGAATACAATACAATAATATTCTTGTATTAATTCTTA TGTAATTATGCGATTCATGGTTTGGTTTTTCAGATTGATGAGAATGTTGCTAGGGAAATCATCAACCATAGAAGTCTCCG TCATCCCAATATTATTCGCTTCAAGGAGGTCTGTCAATCTGTCATTATTGATTATTCTATCCTCTTCAGCTTCAGCTTCA GCTTCTTTATTACTCACTTACTTTCACTTTTGCAGCTGGTTTTGACTCCAACCCATCTCGCTATAGTTATGGAGTATGCT GCAGGTGGAGAGCTCTTTGAACGAATTTGTACTGCTGGAAGATTCAGTGAAGATGAGGTATGCTATTCAAATTCAAATTC AAATTACTTTCTTTCACCTTCAAATTCTATCATGCTTTTCTCATTCTTCTTATTTCCAGGCTCGCTATTTCTTCCAGCAG CTCATCTCAGGAGTTTGCTACTGTCATGCAATGGTAAATCTCGGAATGGATTTTCGTACTTTGTTTTTGCCTCTTCTTTA GGGTTGATTTTCTATGTAATTAATTTTCCTTCTTTTGTAGCAAATCTGCCATCGAGACTTGAAGCTGGAGAACACCTTGT TGGATGGCAGCCCTGCCCCTCGGCTCAAAATTTGTGATTTTGGTTATTCCAAGGTTTAATTATGGAGTCATATCACTACC AAATACATCATATCTCACAAGTTTTGCTTCTGACACCCTTTTTTTTTATTTATTTTTCTAGTCATCTCTGCTTCACTCTA GGCCTAAATCTACTGTGGGAACTCCAGCATACATTGCACCAGAGGTTCTTTCACGTAGAGAATATGATGGAAAGGTAATT TAGTTTCTATCTTGCAATATCAGTGAGATGTATTGGAATGGTTCAACACACCCAAGGACAATATCTCATGCAATTATAGA TCATGACTTATGTTTCCACATATAACTGACGGAAATCAATAATAATATGGACAACATACCATGTATGAATTGAGTAGTTT GGAATGTAAATTATGGATATGTAAATTACGGAAATCATGACTTATGCGTAATGGTTAATTGTGATTTCAAATGCTCTTAA AAATTTTAGCCACATCAAGGAAAGGGTATGCTTACTTTCATGATCTCTGTTTGTTCTGACAATTTGCCAGAGAGCAAAAT TTGAAGATTTTCAGCCTTGAAATGGTTAACCTTTGCTTGATGAATTTTCAATGTTTTATATGTTGATTGATGATGTTTTC ATTTTCTTTGTATTCTATTCTGCTTTGTGCCTGTTCAGTTGGCAGATGTATGGTCCTGCGGAGTGACTCTTTATGTAATG CTGGTGGGTGCATACCCATTTGAGGACCCAGAGGATCCCAGAAATTTCAGGAAAACCATAAATGTACATATGTTTTTCCC CTTCATCTTAGTTGATGATAGATTTATGAAACGCCTACTCTTTCTGACTCTCCATATTCTTATACAGAGAATTATGGCTG TTCAATACAAGATTCCAGACTATGTTCACATAACTCAAGACTGTAGACATCTGTTGTCTCGCATTTTTGTTGCAAATCCT GCTAAGGTATGCAAATGCTATGCTGCTGAACAGCACTTCAGTGTGTTATTTATCTGATTTTTCTTTTAAAGGAACTTTGT CAAATTTTTCAGTCTAGGTGCATGATATCACTTGAAGTTAGCTTATTGTTGCTCAACAATTTCATTGTCTCGCATTTTGT GTTTTTGTGATTTGCTGCAGAGAATCACCATCAAGGAAATTAAGTCTCATCCATGGTTTTTAAAGAACTTGCCTAGAGAG TTGACAGAAGTGGCTCAAGCTGTCTACTACAGAAAAGAAAACCCAACTTTTTCCCTTCAAAGTATAGAAGACATTATGAA TATTGTTGAGGAGGCCAAGACCCCAGCTAAAGTACCCAGGTCAATCGGAGGGTATGGTTGGGGAGAAGAAGATGATGATG AAACAAAAGAAGAAGCAGAGGCTGAGGTGGAAGAAGATGAGTATGAAAAAAGCGTCAAGGAAGCACAGGCTAGCGGAGAA ATTAATGTCAGTTAAAAAGAGGAAATGTTTATTATTAGATAGAGAAGTAGATTCTTGGTTTCCTTTGCTCTTGGTTAAGC TCAACTAAGTTGAGACTTGAGAGTGTTTTGCTTGTATTTATAAAATCCAGTTTTCTGCATAGGACATAATTATATATGCA TGTACATTTTTAGTATTGTAGAGGGTTGTTAATTGTGACCATATTACAAGTATTATCCTGTCTTTCTGGTGCTACATCAT ACTCATCTTTCTAGCTAGGCACATGTGCTATTGTTTTATCTTTTGGAGTCAAAATGCTCTGGATGGAGTTTCCTTGTATC CGATTTCTTTCCCTTTCAAGTGTTTTCTGTTGTCAAGTTTGGTTTTATGTCTATTTCATCGTGATGCTTGTCTGGCTCAA TGTCTGCCAGCTTAAAGACTGAGGCAAAAATTTCCCAACTATGCAACAAGTGTGGTTGAAGGTTAAACAAGTGCAGCTTT TAGGTCTTTTTATTTTGTTACAAAGGGAAAAGACAACAAGAAACGAAACTACAGAAGCACATCCGGCACAAGAGAGACAC AATATTGGGAGGTTGATACTTTCAAACCTACCTCCTACAGTCAACCCACG
CDS sequence (LotjaGi6g1v0362000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACAAGTACGAGCTGTTGAAGGATATAGGATCTGGAAACTTCGGTGTCGCCAGGCTCATGCGCCACAAAGAAACCAA AGAGCTTGTCGCCATGAAATACATTGAACGCGGTCTCAAGATTGATGAGAATGTTGCTAGGGAAATCATCAACCATAGAA GTCTCCGTCATCCCAATATTATTCGCTTCAAGGAGCTGGTTTTGACTCCAACCCATCTCGCTATAGTTATGGAGTATGCT GCAGGTGGAGAGCTCTTTGAACGAATTTGTACTGCTGGAAGATTCAGTGAAGATGAGGCTCGCTATTTCTTCCAGCAGCT CATCTCAGGAGTTTGCTACTGTCATGCAATGCAAATCTGCCATCGAGACTTGAAGCTGGAGAACACCTTGTTGGATGGCA GCCCTGCCCCTCGGCTCAAAATTTGTGATTTTGGTTATTCCAAGTCATCTCTGCTTCACTCTAGGCCTAAATCTACTGTG GGAACTCCAGCATACATTGCACCAGAGGTTCTTTCACGTAGAGAATATGATGGAAAGTTGGCAGATGTATGGTCCTGCGG AGTGACTCTTTATGTAATGCTGGTGGGTGCATACCCATTTGAGGACCCAGAGGATCCCAGAAATTTCAGGAAAACCATAA ATAGAATTATGGCTGTTCAATACAAGATTCCAGACTATGTTCACATAACTCAAGACTGTAGACATCTGTTGTCTCGCATT TTTGTTGCAAATCCTGCTAAGAGAATCACCATCAAGGAAATTAAGTCTCATCCATGGTTTTTAAAGAACTTGCCTAGAGA GTTGACAGAAGTGGCTCAAGCTGTCTACTACAGAAAAGAAAACCCAACTTTTTCCCTTCAAAGTATAGAAGACATTATGA ATATTGTTGAGGAGGCCAAGACCCCAGCTAAAGTACCCAGGTCAATCGGAGGGTATGGTTGGGGAGAAGAAGATGATGAT GAAACAAAAGAAGAAGCAGAGGCTGAGGTGGAAGAAGATGAGTATGAAAAAAGCGTCAAGGAAGCACAGGCTAGCGGAGA AATTAATGTCAGTTAA
Protein sequence (LotjaGi6g1v0362000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDKYELLKDIGSGNFGVARLMRHKETKELVAMKYIERGLKIDENVAREIINHRSLRHPNIIRFKELVLTPTHLAIVMEYA AGGELFERICTAGRFSEDEARYFFQQLISGVCYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV GTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTINRIMAVQYKIPDYVHITQDCRHLLSRI FVANPAKRITIKEIKSHPWFLKNLPRELTEVAQAVYYRKENPTFSLQSIEDIMNIVEEAKTPAKVPRSIGGYGWGEEDDD ETKEEAEAEVEEDEYEKSVKEAQASGEINVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 346 | 346 | 2.3E-207 | – | |
| PANTHER | 1 | 346 | 346 | 2.3E-207 | – | |
| Gene3D | 1 | 79 | 79 | 5.3E-32 | – | |
| SUPERFAMILY | 2 | 293 | 292 | 2.29E-82 | ||
| CDD | 3 | 259 | 257 | 0.0 | – | |
| Pfam | 4 | 260 | 257 | 6.6E-70 | ||
| SMART | 4 | 260 | 257 | 2.5E-99 | ||
| ProSiteProfiles | 4 | 260 | 257 | 47.382 | ||
| ProSitePatterns | 10 | 33 | 24 | - | ||
| Gene3D | 80 | 267 | 188 | 3.9E-61 | – | |
| ProSitePatterns | 119 | 131 | 13 | - | ||
| MobiDBLite | 307 | 351 | 45 | - | – | |
| MobiDBLite | 315 | 332 | 18 | - | – | |
| Coils | 323 | 345 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0362000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…