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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0363300 |
| Transcript ID | LotjaGi6g1v0363300.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | magnesium transporter, putative (DUF803); TAIR: AT1G71900.1 magnesium transporter, putative (DUF803); Swiss-Prot: sp|Q94AH3|NIPA4_ARATH Probable magnesium transporter NIPA4; TrEMBL-Plants: tr|I3T7G8|I3T7G8_LOTJA Probable magnesium transporter; Found in the gene: LotjaGi6g1v0363300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:67487408..67494017) extracted from Lotus japonicus Gifu genome v1.2.
TTGCGATTTGGGCCATGTGTGTGTAATTTGGAAAGAACAAAGTAGGGATTAGCAGAGAATCAAGAATGGAGTGTAGCACT CATCAACCTTCCTTCATTGTGTTAGTGGTGTCTTAGTGGTGTGGTGTGGTGTGGTGTGGTGTTACTCACAATTCACAAAC ACTGTAAAATTAATTTCCCTTTTCCCTTTCTTCCTGTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTGTGTGCTTTCACTT TCTCTCGGTGGGTGTGGGTATGATTATGCATCTTATGCTACAATCGCAATTGCCCGATCTAGAGGAAGACAGCCTTTTGT GACCGACACGACACCACAGCTGTATCCAATCCAGGCCACGAAGGAAGGAAACTTAGATTTCTGAATTATTTACTAACCTA ACCTAACCTAACCTAACCTAGGGTTTGGTGCGGGTGCCATGGCGACTTCGTCGAACCCTAGCAGCTGGCGCGAGGGCATG TCCTCCGATAACATTAAGGGTCTAGTCCTCGCTCTCTCATCAAGCTTCTTCATCGGCGCCAGCTTCATTGTCAAAAAGAA GGGTTTGAAAAAAGCAGGCGCCAGTGGAATCCGAGCAGGTACCATGGATCCGCCCAATTCATTTCATTTTACTGCTTAGC TACTAGTCTCTGATCTCTCAATTTCCTCTACTTCTCACTCACTCTTTTACTTGGATCGTGCCAAAGATCTGCCTCTTTTC TACTTTCAACTCACTCAAATCGACTAAACTCATTCATGTACAATTGCTGCATTTCAACACTTTATGTTCTCATCCATTTT TAAGCAACATTTTAGTCATGTCAATCAATCTTACCGTTATCTTAATTGTCGCATAGAAAATGGAGTTAAATGTCTCGGAT TTTGTTGTTAATGTTTAAATTATGCTCAAAGTTCTGTCTACAGACTACAAGTTGAATGTTTTCAGGTTGTTGTCACTCAT CAGTATGGCCATCTTTTAATTTTCTCCTACAAATTTATTATGTCGTGTTAAAATGATTTAGATGCTTCTCAACCCTATGC AATTGCAGTCGCAGTAATGGTAGTAACGGTAATGGTCGCATTGGGGTCATTCGTATTGCGGAAAATTGTGAACAAACACG GCCGAAATCATGGTTGCATTGCGGTTTCCGAAACCGCCAAAATGTTGACGTCACGGCTAAAATTACGGTCGCGGACCTTG ATTTAAAACCATATTTTCATCTTAAGATTAGTAATGAGTGGTCAAGATTATTTTACCATTATCGAAATTCTAAGGAAGTG GAGTTTGATGTGACCTGATATTTAATGTTTAAATTATTGTGGAAAATCTGTCTACAGACTACAAGTTGAATGTTATAATG TTGTAGCTGACATTTCAAATAATTATCTTTGACAGGAAGTGGAGGTTATTCGTACTTGTATGAGCCGCTTTGGTGGGTGG GCATGATAACTAGTGAGTCATACATAAATCGCTTTCTTATGATGTGATAACAATTGTTCGTGCAAAATCTTGTTGATTGA ATGGCATTGGTGAACTGTATCAATGATTTTTGCTTTCCCAAGTGTATCCCCACAACATCTGATATTTTTTTTCAATCTTT TAGTCAATGTTATATTTTAAGTGCTGAATTTAATCTAGTTAGTAACTAAACTTGTATGAATTGAGTTCTATGCCAAACCT TATCAAATCCAAAGAGGAGTATTCTTCTGTATGTTTTTCTCTTCATCTCTTAATGATTTGTGACTTTAGCAAAAATTACA ATTTTAGGTAAGTTATCTAACTTTTTACAACTTTATTATCCAGATTTATGTTAAAAATTCTGCTAAAGCTTGTACCTTTT CCATCTAATCTTCTAACTTTAGTTCTTAGATTTTCTTGCTTCACACATGTTCCAAGGGAATATTTCTGCTGGGACACAAA AGTCATCCGAGGATATGACAAAATATCTGCATTCAATTTATTGATATGAGTTGTTTATAGCTAATGATATAAATAAGTGG TTTAAAGTTTCTATTCTAATACATTTGCTATTTCAACAGTGATTGTCGGAGAGATTGCCAATTTTGCAGCATATGCATTT GCTCCAGCTTTATTGGTCACCCCTCTTGGTGCTCTTAGCATTATTATAAGGCATGAAAAATATTTAGTTTTATATTGATG CTTGAATGTGGGTAAATGCTGATTTGTGATGTTTTTTGTTTTTTGTTTTTGCAGTGCTGCCCTTGCTCATATTATTTTAC GGGAAAGGCTACATATCTTTGGAGTTCTTGGTTGTGCTTTGTGTGTTGTGGGGTCTACGACAATTGTTCTACATGCCCCT CAAGAACGGGAAATTGAATCTGTGACAGAAGTTTGGGATCTTGCTATGGAGCCTGGTAGCCATGTTCCAACCTGAAATAT TACTCTCTTTACTCAAAATATCATGTCAGACTACTAACTAAGAGGCTTAATCTTTCTTCTGCAGCATTTCTCTTCTATGC AGCTTTGGTTATCACAGCTGCTTTTGTTCTCATCTTCCACTTCATTCCTCTGTATGGCCAGACACACATAATGGTTTATA TTGGTGTTTGTTCTCTTGTTGGTTCTCTATCGGTATGTCTAGATGTTGATGAATTTCTAGTAGTCTTTGTTCTCCCTTAG TTATCTGGTTTCCCCTGTTTTTCTGTACTTATATTGTAAGGTTTTCCTTCGACAGGTTATGAGTGTTAAGGCTCTTGGAA TTGCCATAAAGTTAACTCTGTCAGGGATGAATCAGCTTATTTACCCTCAAACTTGGGTATTCACTCTAGTTGTAACTGTT TGTGTTCTTACCCAAATGAATTATTTGAATAAGGTATGATAGCTTTTTCTTAATCTCTTTTACTTCTTTTGGGAACACTA AACAAGTCCACCACGCACTTCTTTGGTTTAATTAACTTTACATTGTACCATTCAGTAAATCTGTGGAAGTATCATGTATT GTATGGTTATGCTATTATTTTTTGTAAATTCATTTTTGTTTTTGAATACTTTACATGTGTACTTTTTTCCTTATTGTGTT GATATTTGATATCAAATTGTTCAAATGGTGGTTGTTTAGTATTTACCTTGTCATCTTACTTTTGCAGATATGTTTCTGGA ACCATACGCCTTTTTCCTTTGAAAACCCTTTAAGCATATCAACATCACATATGACCTTGTGATCTTTAGCGAACTACTGT TATTAATTTTGATTTTTACCCTTGATTTTAAAAATAAGATCATTTTCACCATTTATTGAATAAATAGTATCAAATATTTA AAGAAGGGAAAATGTAAAATATTTTTTTAAATGATAAAAGGAAGGTTTGATAGAAGAATTGACAGATGAGGAAGAGGGTT TCTCAGCAAGGAGCTAGAGTTGTTTGAAACCCTTTAACTAAGTTTCATCTATGTGGTATGCCCACTGTTGGAATTCCATA GAAATTCAAAACCATCCTTCATTTTGAAGTGGAGCCACATGCCTGCAGGTTGAATAGTTTTGGCCGAACACATAGACATA GTTTTACCCAACTTTGTTTCATAGAAAGAACAATAAAAATGAAAAGAAATTGGGAATTCATGAAGTTTTTTTATGAAAAC CGAAAGATAAAAAAGGAGAAATAATGAATACATTATTCATTCACTACTCATTATTGTGCAGTTAATTTGCAGCCTTGCTG TGGCAGTTTTGCTTTAAGGATAATACTTTTCCTTAAAAACTCCACGTTTTTCACCATTATTTGTGAAACAGAACAACCAT ATTTTAGTCCATTTTTCTTCAATCAGTGAAATAGTGCACTGAAATTGATATCTTAATAACTGGCTTGCAGGTGGGTAATG AATAGGAAGGAGATCTGATGAAGCAAGTGTAATGAATGTTTTAATAATTTAAATGCATACAAAGGCAGGTTTAGGTATCT CGATGGATGGTGTATGAGAGCAAATTCATTTTCTCTATAGCTTTAAACTTGAATTTGTAGGATTAGGAGGAGAATTTAAT ATACAGTTGCCTAGTTCTGTGTGTCAAATTGGGCCCGATCCTGCTACTTATTAGTATTATGCAATAACTTTTACATATTG TCACCTTTTTTTAATGTGATGGCTAGTTTTTCTACCCGTGATACTAATTTTATTGTTCTTCATTCAGGCACTGGATACTT TTAATACGGCAGTGGTATCTCCAATATATTATGTCATGTTCACAACATTAACCATTGTGGCTAGTGTTATCATGTTTAAG GTAAGTCTTGTTTCCTTAACGATATTATTGTACTTCACTTCATTGCTATACTATTAAGGGGGTCTTTGGTATACAAGTTT GTTTTTCATTTCTGGGAATCATGTTTCTCGGGGATCATGATTCCTAGCAATGTTACAAATGCCTAAAATATTCCAGGAAT GTTAGACAATCTCTCCCATTATCATTGAAAAGTTGTATCTACCTCTTCTCTTGGAAATGTTTTGCTGGGATATTAGTTTC CTGGGATTTTTTTTAAGAATCATACTGAACATGGCAATTTAAGATGCTCAAGTAAGATTCCAGGGAAACTCCACCCCCTA TCAAATCCCCCCTTACAAATTTGTAAATTGTGCTACAGAAAATATTCAGGATTGACGGCATATTTTATAATCTGTTTTTT TAGGCCTATTGGCTAACAATTTTATTTGAAGTGTGTATCATGATTGTTTATACACTACATATTATTGTGTAGTGTATAAA GAATCATGATATACATTGAACTGCACTGCTATGCAACAACTAGGAGTGGCCAAGGGTCGCTACGCACTGCTACGGCGCTA TAGCGCGCTATTGGCAACCCTGATGTTGTCGGAAGATCCTTAATGATGCTTATATACCAGTTGTTGCCTAGAACTTTGTG AACAGAGTTTTATTTGCTAGTCAAGATTCTCTAAGTGAGTCCAACATAAAACATCTCTAATTAACTGCTTGTGAATGGAG AGAGAAATATTGTTGAGAATAAATGACTATCTTTCGAGTTCCGAGACATTTACATCTAGAAGGTGTGGGAGTTGTATGGA AACTCAATGGGGTGTGAAATGTCTTTTGCTCTTTCCCTCGAATAAGCATACTGACATGAAAATCCTACAGACACATACAA CTGAACAAGAATTTGTTTTCTTTGATTTACATGATTTGGATGTCTTGTATTTCGTGTGCAGGGGTTCTACTTGTTATTTA CACTCTCAATGTATGTCTACTACTTTCCATTTTATAGGTTGTCATGTGATTGAGAATTGAATTTGATGTATCAGGACTGG GATAGGCAAAGTCCAACACAAGTTATAACAGAAATATGTGGGTTCGTGACAATACTTTCAGGAACTTTTCTTCTTCACAG GACTAAGGATATGACTGATGGTCATGGTATGCACTAGTGCTCCAATTGTAGTAATTTCTCATGACTTTAGATTACCACCT CTCATGCTCACATGCACTTCCTGGGGTAAGATCTTCAAGCCTTCAAGCATGATTTATTAATATTATCTTCATGTGCAGGT TTGCAATCATCTTCATCAATTAGACTTCCTAAGCATTCCGAAGAGGATGGCTTTGATGGTGGTGAAGGCATTCCTCTTAG ACGGCAAGAAACTTCGAGATCGCCATGATGTATTCTTTGTGTTATATCTTGCATATCTAAATGAGCTTGAGGCGCTGGGG AGGGTTTTAGCCAACTGCCAATGTCATCGTGTATTCTACTGATTATTTTCCCTCCCCATCATATTTTTTTCCTGATACAG TTGGAGTGGAAGATGGGAGTTTCCTACCAGTCTTCTTTTGGCGTGCTGATGATTATGCTTTCTGATCTTGCCTTGTATAC CCCTCTTCACTCCATACCCAAGACAAAGGCCAATGTAATTTTGTGCACACTGATCATAGATAGTGTACTTCAGTTTAAAT GAAAGTATTCACCATCAAATTTTGAATTGGACAGTGCGGCAATGTTATTATCAGTGTCTGCCAATGGAACTCGAACTGAC CGCCATATTCCATTCCTATTTGCACTTGTCAGAGCAAAATATGGAAGTCAGGATATGTAGATTTTAAAGTCAAAAGAATT GTTTAATACATGCATGGCATGTGGGGCCTGTTCTAAATTTTACCATATATATTCTTTGAACTTAACGAGTCACACACCCC TGGAGCGGCTTACTGATGATGCTGGTGCTGCTTCTTCTCCTCATCCCCTTCCTCACTCCCTCTCTTTCGGGATATATATA GAATAACTAAACTCACTTGCACTTGCTTGTTTTTCTGTCCCTTGTGTAGTAGTACTCAACATTCATCCCAGCCTTTGGTA AAATCATATTAGGTAAGTGCTTCATTTTAAAGGATTCGTCTTGTTATTGACCAAAAAAAAAGGATTCGTCTTGTTCTGAG GGCATTTATAGATTGTCTGATTCAAAAAAGGAAGGGGAGAAGGAAAATTAAAATTCTCCTATTTCCGATAAGTTGAAAGG GAGGGAAGACTCCGGAAGAGTGACTATGTTTAAAGATTCGACTGATGTGAAAATGCTCAAAGAATTGAGGCTTGCAAGAT ATGAAAGTGAAGAAGTTTGAAGTAACATCTTTTTTACTTGACCAACAAAA
CDS sequence (LotjaGi6g1v0363300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGACTTCGTCGAACCCTAGCAGCTGGCGCGAGGGCATGTCCTCCGATAACATTAAGGGTCTAGTCCTCGCTCTCTC ATCAAGCTTCTTCATCGGCGCCAGCTTCATTGTCAAAAAGAAGGGTTTGAAAAAAGCAGGCGCCAGTGGAATCCGAGCAG GAAGTGGAGGTTATTCGTACTTGTATGAGCCGCTTTGGTGGGTGGGCATGATAACTATGATTGTCGGAGAGATTGCCAAT TTTGCAGCATATGCATTTGCTCCAGCTTTATTGGTCACCCCTCTTGGTGCTCTTAGCATTATTATAAGTGCTGCCCTTGC TCATATTATTTTACGGGAAAGGCTACATATCTTTGGAGTTCTTGGTTGTGCTTTGTGTGTTGTGGGGTCTACGACAATTG TTCTACATGCCCCTCAAGAACGGGAAATTGAATCTGTGACAGAAGTTTGGGATCTTGCTATGGAGCCTGCATTTCTCTTC TATGCAGCTTTGGTTATCACAGCTGCTTTTGTTCTCATCTTCCACTTCATTCCTCTGTATGGCCAGACACACATAATGGT TTATATTGGTGTTTGTTCTCTTGTTGGTTCTCTATCGGTTATGAGTGTTAAGGCTCTTGGAATTGCCATAAAGTTAACTC TGTCAGGGATGAATCAGCTTATTTACCCTCAAACTTGGGTATTCACTCTAGTTGTAACTGTTTGTGTTCTTACCCAAATG AATTATTTGAATAAGGCACTGGATACTTTTAATACGGCAGTGGTATCTCCAATATATTATGTCATGTTCACAACATTAAC CATTGTGGCTAGTGTTATCATGTTTAAGGACTGGGATAGGCAAAGTCCAACACAAGTTATAACAGAAATATGTGGGTTCG TGACAATACTTTCAGGAACTTTTCTTCTTCACAGGACTAAGGATATGACTGATGGTCATGGTTTGCAATCATCTTCATCA ATTAGACTTCCTAAGCATTCCGAAGAGGATGGCTTTGATGGTGGTGAAGGCATTCCTCTTAGACGGCAAGAAACTTCGAG ATCGCCATGA
Protein sequence (LotjaGi6g1v0363300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATSSNPSSWREGMSSDNIKGLVLALSSSFFIGASFIVKKKGLKKAGASGIRAGSGGYSYLYEPLWWVGMITMIVGEIAN FAAYAFAPALLVTPLGALSIIISAALAHIILRERLHIFGVLGCALCVVGSTTIVLHAPQEREIESVTEVWDLAMEPAFLF YAALVITAAFVLIFHFIPLYGQTHIMVYIGVCSLVGSLSVMSVKALGIAIKLTLSGMNQLIYPQTWVFTLVVTVCVLTQM NYLNKALDTFNTAVVSPIYYVMFTTLTIVASVIMFKDWDRQSPTQVITEICGFVTILSGTFLLHRTKDMTDGHGLQSSSS IRLPKHSEEDGFDGGEGIPLRRQETSRSP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 4 | 327 | 324 | 4.3E-202 | ||
| PANTHER | 4 | 327 | 324 | 4.3E-202 | – | |
| Pfam | 17 | 309 | 293 | 9.8E-136 | ||
| Phobius | 21 | 38 | 18 | - | – | |
| TMHMM | 21 | 38 | 18 | - | – | |
| Phobius | 39 | 64 | 26 | - | – | |
| SUPERFAMILY | 64 | 137 | 74 | 1.83E-8 | – | |
| Phobius | 65 | 83 | 19 | - | – | |
| TMHMM | 65 | 87 | 23 | - | – | |
| Phobius | 84 | 89 | 6 | - | – | |
| TMHMM | 89 | 111 | 23 | - | – | |
| Phobius | 90 | 111 | 22 | - | – | |
| Phobius | 112 | 116 | 5 | - | – | |
| TMHMM | 115 | 137 | 23 | - | – | |
| Phobius | 117 | 137 | 21 | - | – | |
| Phobius | 138 | 157 | 20 | - | – | |
| Phobius | 158 | 179 | 22 | - | – | |
| TMHMM | 158 | 180 | 23 | - | – | |
| Phobius | 180 | 184 | 5 | - | – | |
| Phobius | 185 | 208 | 24 | - | – | |
| TMHMM | 185 | 207 | 23 | - | – | |
| Phobius | 209 | 219 | 11 | - | – | |
| Phobius | 220 | 242 | 23 | - | – | |
| TMHMM | 220 | 242 | 23 | - | – | |
| Phobius | 243 | 253 | 11 | - | – | |
| TMHMM | 252 | 274 | 23 | - | – | |
| Phobius | 254 | 275 | 22 | - | – | |
| Phobius | 276 | 349 | 74 | - | – | |
| TMHMM | 286 | 303 | 18 | - | – | |
| MobiDBLite | 313 | 349 | 37 | - | – | |
| MobiDBLite | 323 | 337 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion transmembrane transporter activity | Enables the transfer of magnesium (Mg) ions from one side of a membrane to the other. | ||
| Biological process | Magnesium ion transport | The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi6g1v0363300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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