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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0016979 |
| Transcript ID | Lj0g3v0016979.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine max] gi|356567464|ref|XP_003551939.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 205 | 205 | 0 | – | |
| PANTHER | 1 | 205 | 205 | 0 | – | |
| PRINTS | 147 | 160 | 14 | 9.20E-16 | ||
| SUPERFAMILY | 148 | 448 | 301 | 1.11E-69 | ||
| Gene3D | 153 | 521 | 369 | 1.20E-86 | ||
| Pfam | 163 | 212 | 50 | 1.60E-11 | ||
| ProSiteProfiles | 164 | 215 | 52 | 14.705 | ||
| PRINTS | 166 | 182 | 17 | 9.20E-16 | ||
| Pfam | 215 | 266 | 52 | 2.10E-04 | ||
| PRINTS | 216 | 232 | 17 | 9.20E-16 | ||
| ProSiteProfiles | 216 | 269 | 54 | 11.268 | ||
| PANTHER | 226 | 522 | 297 | 0 | – | |
| PANTHER | 226 | 522 | 297 | 0 | – | |
| PRINTS | 256 | 272 | 17 | 9.20E-16 | ||
| ProSiteProfiles | 270 | 322 | 53 | 10.404 | ||
| PRINTS | 272 | 286 | 15 | 9.20E-16 | ||
| ProSiteProfiles | 326 | 379 | 54 | 10.986 | ||
| Pfam | 328 | 376 | 49 | 9.20E-05 | ||
| ProSitePatterns | 366 | 376 | 11 | – | ||
| PRINTS | 369 | 387 | 19 | 9.20E-16 | ||
| Pfam | 379 | 428 | 50 | 3.10E-13 | ||
| ProSiteProfiles | 380 | 431 | 52 | 13.539 | ||
| PRINTS | 427 | 448 | 22 | 9.20E-16 | ||
| Pfam | 431 | 481 | 51 | 1.60E-06 | ||
| ProSiteProfiles | 432 | 498 | 67 | 9.881 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0016979.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0016979.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.