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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0246249 |
| Transcript ID | Lj0g3v0246249.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter C family member 13-like [Glycine max] gi|356547472|ref|XP_003542136.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 232 | 232 | – | – | |
| SUPERFAMILY | 12 | 159 | 148 | 1.49E-33 | ||
| Gene3D | 17 | 167 | 151 | 2.50E-34 | ||
| PANTHER | 20 | 305 | 286 | 3.10E-147 | – | |
| PANTHER | 20 | 305 | 286 | 3.10E-147 | – | |
| Pfam | 67 | 100 | 34 | 3.30E-05 | ||
| ProSitePatterns | 75 | 89 | 15 | – | ||
| TMHMM | 229 | 251 | 23 | – | – | |
| Phobius | 233 | 254 | 22 | – | – | |
| Gene3D | 239 | 308 | 70 | 3.90E-04 | – | |
| Phobius | 255 | 281 | 27 | – | – | |
| Phobius | 282 | 306 | 25 | – | – | |
| TMHMM | 282 | 304 | 23 | – | – | |
| Phobius | 307 | 341 | 35 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj0g3v0246249.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0246249.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.