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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR017871
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 328 results. Now displaying 1 of 7 with 50 rows per page. This search has taken 6.455s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0033249.1
n.a. PREDICTED: ABC transporter A family member 2-like [Cicer arietinum] gi|502126773|ref|XP_004499431.1| chr0 10524457 10530928 -
2 domain predictions
2 GO terms
Lj0g3v0041889.1
n.a. PREDICTED: ABC transporter C family member 12-like [Glycine max] gi|356517706|ref|XP_003527527.1| chr0 13755005 13768595 +
2 domain predictions
2 GO terms
Lj0g3v0041899.1
n.a. PREDICTED: ABC transporter C family member 2-like [Glycine max] gi|356508251|ref|XP_003522872.1| chr0 13770401 13778552 +
2 domain predictions
2 GO terms
Lj0g3v0065079.1
n.a. ABC transporter G family member [Medicago truncatula] gi|357443805|ref|XP_003592180.1| chr0 22615411 22618188 +
2 domain predictions
2 GO terms
Lj0g3v0066079.1
n.a. PREDICTED: ABC transporter B family member 4-like [Glycine max] gi|356499544|ref|XP_003518599.1| chr0 23131074 23138102 +
2 domain predictions
2 GO terms
Lj0g3v0066219.1
n.a. PREDICTED: ABC transporter F family member 4-like isoform X1 [Cicer arietinum] gi|502102241|ref|XP_004492011.1| chr0 23235805 23238545 -
2 domain predictions
2 GO terms
Lj0g3v0068559.1
n.a. n.a. chr0 24564625 24570218 +
2 domain predictions
2 GO terms
Lj0g3v0068559.3
n.a. n.a. chr0 24565605 24570218 +
2 domain predictions
2 GO terms
Lj0g3v0070149.1
n.a. PREDICTED: ABC transporter C family member 10-like [Glycine max] gi|356561462|ref|XP_003549000.1| chr0 25500628 25508114 -
2 domain predictions
2 GO terms
Lj0g3v0077889.1
n.a. ABC transporter D family member [Medicago truncatula] gi|357463371|ref|XP_003601967.1| chr0 29945243 29949461 -
2 domain predictions
2 GO terms
Lj0g3v0077889.2
n.a. PREDICTED: ABC transporter D family member 1-like isoform 1 [Glycine max] gi|356540293|ref|XP_003538624.1| chr0 29945243 29949461 -
2 domain predictions
2 GO terms
Lj0g3v0088939.1
n.a. PREDICTED: ABC transporter C family member 10-like [Glycine max] gi|356561462|ref|XP_003549000.1| chr0 36412676 36417842 -
2 domain predictions
2 GO terms
Lj0g3v0211629.1
n.a. PREDICTED: ABC transporter C family member 12-like [Glycine max] gi|356517706|ref|XP_003527527.1| chr0 106650389 106656979 +
2 domain predictions
2 GO terms
Lj0g3v0222689.1
n.a. PREDICTED: ABC transporter C family member 10-like [Cicer arietinum] gi|502119079|ref|XP_004496497.1| chr0 114613500 114618750 -
2 domain predictions
2 GO terms
Lj0g3v0241969.1
n.a. PREDICTED: ABC transporter G family member 21-like [Cicer arietinum] gi|502118333|ref|XP_004496215.1| chr0 125539178 125544861 -
2 domain predictions
2 GO terms
Lj0g3v0246249.1
n.a. PREDICTED: ABC transporter C family member 13-like [Glycine max] gi|356547472|ref|XP_003542136.1| chr0 127549679 127557918 +
2 domain predictions
2 GO terms
Lj0g3v0246249.2
n.a. PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 13-like [Cicer arietinum] gi|502080578|ref|XP_004486609.1| chr0 127549679 127553617 +
2 domain predictions
2 GO terms
Lj0g3v0249749.1
n.a. PREDICTED: ABC transporter C family member 12-like [Glycine max] gi|356517706|ref|XP_003527527.1| chr0 129458783 129461158 -
2 domain predictions
2 GO terms
Lj0g3v0258479.1
n.a. PREDICTED: ABC transporter G family member 7-like [Glycine max] gi|356536210|ref|XP_003536632.1| chr0 134192185 134195112 +
2 domain predictions
2 GO terms
Lj0g3v0272489.1
n.a. PREDICTED: ABC transporter G family member 21-like [Glycine max] gi|356502704|ref|XP_003520157.1| chr0 141196409 141204096 +
2 domain predictions
2 GO terms
Lj0g3v0285989.1
n.a. ABC transporter B family member [Medicago truncatula] gi|357463203|ref|XP_003601883.1| chr0 148513399 148520767 +
2 domain predictions
2 GO terms
Lj0g3v0304749.1
n.a. PREDICTED: ABC transporter B family member 2-like [Glycine max] gi|356497653|ref|XP_003517674.1| chr0 158742776 158749005 +
2 domain predictions
2 GO terms
Lj0g3v0304759.1
n.a. PREDICTED: ABC transporter B family member 2-like [Glycine max] gi|356497653|ref|XP_003517674.1| chr0 158746892 158750007 +
2 domain predictions
2 GO terms
Lj0g3v0306379.1
n.a. PREDICTED: ABC transporter C family member 5-like [Glycine max] gi|356545904|ref|XP_003541373.1| chr0 159858016 159866960 +
2 domain predictions
2 GO terms
Lj0g3v0306379.2
n.a. PREDICTED: ABC transporter C family member 5-like [Glycine max] gi|356545904|ref|XP_003541373.1| chr0 159858016 159866960 +
2 domain predictions
2 GO terms
Lj0g3v0312759.1
n.a. PREDICTED: ABC transporter F family member 3-like [Glycine max] gi|356575104|ref|XP_003555682.1| chr0 163318246 163328302 +
2 domain predictions
2 GO terms
Lj0g3v0317109.1
n.a. PREDICTED: ABC transporter C family member 10-like [Glycine max] gi|356561462|ref|XP_003549000.1| chr0 165627202 165636355 +
2 domain predictions
2 GO terms
Lj0g3v0317109.2
n.a. PREDICTED: ABC transporter C family member 10-like [Glycine max] gi|356561462|ref|XP_003549000.1| chr0 165627202 165636355 +
2 domain predictions
2 GO terms
Lj0g3v0317109.3
n.a. PREDICTED: ABC transporter C family member 10-like [Glycine max] gi|356535814|ref|XP_003536438.1| chr0 165632111 165636355 +
2 domain predictions
2 GO terms
Lj0g3v0329159.1
n.a. PREDICTED: LOW QUALITY PROTEIN: ABC transporter D family member 1-like [Cicer arietinum] gi|502135726|ref|XP_004502432.1| chr0 172072181 172084266 -
2 domain predictions
2 GO terms
Lj0g3v0329529.1
n.a. PREDICTED: ABC transporter G family member 11-like [Glycine max] gi|356559983|ref|XP_003548275.1| chr0 172274155 172280656 -
2 domain predictions
2 GO terms
Lj0g3v0354849.1
n.a. PREDICTED: ABC transporter G family member 22-like [Cicer arietinum] gi|502122191|ref|XP_004497624.1| chr0 186894887 186903284 -
2 domain predictions
2 GO terms
Lj1g3v0809800.1
n.a. PREDICTED: ABC transporter B family member 25-like [Glycine max] gi|356513473|ref|XP_003525438.1| chr1 10628448 10634642 -
2 domain predictions
2 GO terms
Lj1g3v1219030.1
n.a. PREDICTED: ABC transporter F family member 5-like [Glycine max] gi|356509032|ref|XP_003523256.1| chr1 14834239 14839358 +
2 domain predictions
2 GO terms
Lj1g3v1219030.2
n.a. ABC transporter F family member [Medicago truncatula] gi|357464427|ref|XP_003602495.1| chr1 14836645 14839358 +
2 domain predictions
2 GO terms
Lj1g3v1316940.1
n.a. ABC transporter I family member [Medicago truncatula] gi|357464675|ref|XP_003602619.1| chr1 15818506 15822250 +
2 domain predictions
2 GO terms
Lj1g3v2809350.1
n.a. PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like [Glycine max] gi|356531918|ref|XP_003534523.1| chr1 31973174 31980444 -
2 domain predictions
2 GO terms
Lj1g3v2809350.2
n.a. PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like [Glycine max] gi|356531918|ref|XP_003534523.1| chr1 31973174 31980444 -
2 domain predictions
2 GO terms
Lj1g3v4104820.1
n.a. PREDICTED: ABC transporter C family member 10-like [Cicer arietinum] gi|502119079|ref|XP_004496497.1| chr1 48697493 48700940 +
2 domain predictions
2 GO terms
Lj1g3v4241080.1
n.a. PREDICTED: ABC transporter A family member 1-like [Glycine max] gi|356504779|ref|XP_003521172.1| chr1 50064763 50098381 -
2 domain predictions
2 GO terms
Lj1g3v4241080.2
n.a. PREDICTED: ABC transporter A family member 1-like [Glycine max] gi|356504779|ref|XP_003521172.1| chr1 50072993 50098381 -
2 domain predictions
2 GO terms
Lj1g3v4528420.1
n.a. PREDICTED: ABC transporter C family member 5-like [Glycine max] gi|356505072|ref|XP_003521316.1| chr1 53314020 53321677 -
2 domain predictions
2 GO terms
Lj1g3v4578700.1
n.a. ABC transporter G family member [Medicago truncatula] gi|357510475|ref|XP_003625526.1| chr1 54255122 54258184 +
2 domain predictions
2 GO terms
Lj1g3v4591210.1
n.a. PREDICTED: ABC transporter B family member 1-like [Glycine max] gi|356503728|ref|XP_003520656.1| chr1 55004859 55005902 -
2 domain predictions
2 GO terms
Lj1g3v4591220.1
n.a. PREDICTED: ABC transporter B family member 1-like, partial [Cicer arietinum] gi|502111456|ref|XP_004494063.1| chr1 55006170 55013726 -
2 domain predictions
2 GO terms
Lj1g3v4753220.1
n.a. PREDICTED: ABC transporter G family member 22-like isoform X1 [Cicer arietinum] gi|502112268|ref|XP_004494278.1| chr1 56969097 56976888 -
2 domain predictions
2 GO terms
Lj1g3v4830300.1
n.a. ATP-binding cassette protein [Lotus japonicus] gi|396080274|dbj|BAM33973.1| chr1 58339006 58347196 -
2 domain predictions
2 GO terms
Lj1g3v4830300.2
n.a. ATP-binding cassette protein [Lotus japonicus] gi|396080274|dbj|BAM33973.1| chr1 58348664 58354562 -
2 domain predictions
2 GO terms
Lj1g3v4896960.1
n.a. PREDICTED: ABC transporter C family member 4-like [Glycine max] gi|356536723|ref|XP_003536885.1| chr1 59350458 59357787 -
2 domain predictions
2 GO terms
Lj2g3v0451470.1
n.a. PREDICTED: ABC transporter B family member 28-like [Cicer arietinum] gi|502165769|ref|XP_004513684.1| chr2 6530159 6536664 +
2 domain predictions
2 GO terms