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Lj2g3v3185320.1

Overview

Field Value
Gene ID Lj2g3v3185320
Transcript ID Lj2g3v3185320.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial-like [Glycine max] gi|356501546|ref|XP_003519585.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23151
64 466 403 8.60E-214 –
PANTHER
PTHR23151:SF8
64 466 403 8.60E-214 –
Gene3D
G3DSA:2.40.50.100
92 188 97 3.10E-28 –
ProSiteProfiles
PS50968
94 169 76 28.415
IPR000089
SUPERFAMILY
SSF51230
94 186 93 5.63E-24
IPR011053
CDD
cd06849
95 168 74 2.24E-27 –
Pfam
PF00364
96 168 73 8.00E-18
IPR000089
ProSitePatterns
PS00189
119 148 30 –
IPR003016
MobiDBLite
mobidb-lite
170 246 77 – –
TIGRFAM
TIGR01347
218 465 248 2.20E-127
IPR006255
Gene3D
G3DSA:3.30.559.10
226 464 239 3.90E-92
IPR023213
Pfam
PF00198
236 464 229 7.70E-79
IPR001078
SUPERFAMILY
SSF52777
236 465 230 4.89E-88 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004149
Molecular function Dihydrolipoyllysine-residue succinyltransferase activity Catalysis of the reaction: succinyl-CoA + dihydrolipoamide = CoA + S-succinyldihydrolipoamide.
Subterm of
GO:0006099
Biological process Tricarboxylic acid cycle A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
Subterm of
Part of
GO:0016746
Molecular function Transferase activity, transferring acyl groups Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
Subterm of
GO:0045252
Cellular component Oxoglutarate dehydrogenase complex A complex of multiple copies of three enzymatic components: oxoglutarate dehydrogenase (lipoamide) ; EC:1.2.4.2 (E1), dihydrolipoamide S-succinyltransferase ; EC:2.3.1.61 (E2) and dihydrolipoamide dehydrogenase ; EC:1.8.1.4 (E3); catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and carbon dioxide (CO2).
Subterm of

Genome browser

LORE1 insertions 11

Expression data

Expression pattern

Expression pattern of Lj2g3v3185320.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v3185320.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.