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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0166160 |
| Transcript ID | Lj4g3v0166160.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: peptide transporter PTR2-like [Glycine max] gi|356525018|ref|XP_003531124.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 87 | 87 | – | – | |
| PANTHER | 3 | 572 | 570 | 0 | – | |
| PANTHER | 3 | 572 | 570 | 0 | ||
| SUPERFAMILY | 41 | 258 | 218 | 8.89E-20 | ||
| CDD | 63 | 252 | 190 | 6.70E-04 | ||
| Phobius | 88 | 106 | 19 | – | – | |
| TMHMM | 88 | 110 | 23 | – | – | |
| ProSitePatterns | 102 | 126 | 25 | – | ||
| Phobius | 107 | 112 | 6 | – | – | |
| Pfam | 113 | 543 | 431 | 1.90E-123 | ||
| Phobius | 113 | 139 | 27 | – | – | |
| TMHMM | 115 | 137 | 23 | – | – | |
| Phobius | 140 | 158 | 19 | – | – | |
| TMHMM | 157 | 179 | 23 | – | – | |
| Phobius | 159 | 182 | 24 | – | – | |
| Phobius | 183 | 202 | 20 | – | – | |
| TMHMM | 200 | 222 | 23 | – | – | |
| Phobius | 203 | 222 | 20 | – | – | |
| Phobius | 223 | 227 | 5 | – | – | |
| TMHMM | 226 | 248 | 23 | – | – | |
| Phobius | 228 | 248 | 21 | – | – | |
| Phobius | 249 | 349 | 101 | – | – | |
| SUPERFAMILY | 322 | 575 | 254 | 8.89E-20 | ||
| TMHMM | 346 | 365 | 20 | – | – | |
| Phobius | 350 | 372 | 23 | – | – | |
| Phobius | 373 | 391 | 19 | – | – | |
| TMHMM | 385 | 407 | 23 | – | – | |
| Phobius | 392 | 412 | 21 | – | – | |
| Phobius | 413 | 432 | 20 | – | – | |
| Phobius | 433 | 456 | 24 | – | – | |
| TMHMM | 433 | 455 | 23 | – | – | |
| Phobius | 457 | 475 | 19 | – | – | |
| TMHMM | 470 | 492 | 23 | – | – | |
| Phobius | 476 | 498 | 23 | – | – | |
| Phobius | 499 | 509 | 11 | – | – | |
| Phobius | 510 | 535 | 26 | – | – | |
| TMHMM | 513 | 535 | 23 | – | – | |
| Phobius | 536 | 554 | 19 | – | – | |
| Phobius | 555 | 577 | 23 | – | – | |
| TMHMM | 555 | 577 | 23 | – | – | |
| Phobius | 578 | 596 | 19 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Oligopeptide transport | The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v0166160.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0166160.2, powered by CORGI.
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