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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0684250 |
| Transcript ID | Lj4g3v0684250.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic-like [Glycine max] gi|356521657|ref|XP_003529470.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| PIRSF | 1 | 485 | 485 | 4.40E-231 | ||
| Phobius | 4 | 15 | 12 | – | – | |
| ProSiteProfiles | 5 | 484 | 480 | 91.188 | ||
| PANTHER | 12 | 481 | 470 | 4.70E-210 | – | |
| PANTHER | 12 | 481 | 470 | 4.70E-210 | – | |
| Phobius | 16 | 24 | 9 | – | – | |
| Phobius | 25 | 486 | 462 | – | – | |
| Gene3D | 48 | 300 | 253 | 3.30E-65 | – | |
| SUPERFAMILY | 48 | 304 | 257 | 1.92E-73 | – | |
| ProSiteProfiles | 61 | 285 | 225 | 12.09 | ||
| SMART | 66 | 291 | 226 | 7.40E-09 | ||
| Pfam | 78 | 284 | 207 | 8.40E-08 | ||
| Gene3D | 305 | 464 | 160 | 3.70E-45 | ||
| SUPERFAMILY | 309 | 479 | 171 | 1.15E-52 | ||
| Pfam | 318 | 439 | 122 | 7.20E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Chloroplast | A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. | ||
| Molecular function | [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | Catalysis of the reaction: S-adenosyl-L-methionine + [ribulose-1,5-bisphosphate carboxylase]-lysine = S-adenosyl-L-homocysteine + [ribulose-1,5-bisphosphate carboxylase]-N6-methyl-L-lysine. |
Expression pattern of Lj4g3v0684250.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0684250.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.