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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0321370 |
| Transcript ID | Lj5g3v0321370.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein translocase subunit SECA2, chloroplastic-like [Cicer arietinum] gi|502136002|ref|XP_004502527.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 22 | 22 | – | – | |
| PANTHER | 40 | 579 | 540 | 0 | – | |
| PANTHER | 40 | 579 | 540 | 0 | – | |
| Hamap | 68 | 880 | 813 | 15.747 | ||
| ProSiteProfiles | 76 | 780 | 705 | 132.653 | ||
| SUPERFAMILY | 83 | 304 | 222 | 1.73E-71 | ||
| SMART | 83 | 459 | 377 | 3.20E-230 | ||
| Gene3D | 87 | 304 | 218 | 7.30E-108 | ||
| Pfam | 91 | 458 | 368 | 1.70E-117 | ||
| TIGRFAM | 101 | 854 | 754 | 9.30E-265 | ||
| PRINTS | 136 | 160 | 25 | 2.80E-61 | ||
| PRINTS | 174 | 188 | 15 | 2.80E-61 | ||
| PRINTS | 190 | 200 | 11 | 2.80E-61 | ||
| PRINTS | 243 | 263 | 21 | 2.80E-61 | ||
| SUPERFAMILY | 303 | 424 | 122 | 3.66E-37 | ||
| SMART | 304 | 415 | 112 | 1.30E-42 | ||
| Gene3D | 306 | 424 | 119 | 7.90E-42 | ||
| Pfam | 311 | 415 | 105 | 2.20E-27 | ||
| PRINTS | 396 | 418 | 23 | 2.80E-61 | ||
| SUPERFAMILY | 425 | 472 | 48 | 1.73E-71 | ||
| Gene3D | 426 | 472 | 47 | 7.30E-108 | ||
| PRINTS | 433 | 450 | 18 | 2.80E-61 | ||
| PRINTS | 470 | 483 | 14 | 2.80E-61 | ||
| SUPERFAMILY | 474 | 582 | 109 | 5.33E-41 | ||
| Gene3D | 474 | 593 | 120 | 2.90E-76 | ||
| Gene3D | 679 | 780 | 102 | 2.90E-76 | ||
| SUPERFAMILY | 689 | 761 | 73 | 5.33E-41 | ||
| PANTHER | 709 | 859 | 151 | 0 | – | |
| PANTHER | 709 | 859 | 151 | 0 | – | |
| Pfam | 778 | 856 | 79 | 1.40E-18 | ||
| SUPERFAMILY | 784 | 870 | 87 | 1.96E-15 | ||
| Gene3D | 809 | 858 | 50 | 6.40E-09 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein targeting | The process of targeting specific proteins to particular regions of the cell, typically membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif. | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Protein import | The targeting and directed movement of proteins into a cell or organelle. Not all import involves an initial targeting event. |
Expression pattern of Lj5g3v0321370.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0321370.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.