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IPR011130

Source: InterPro

Description

IPR011130 is a SecA, preprotein cross-linking domain.

<p>The SecA ATPase is involved in the insertion and retraction of preproteins through the plasma membrane. This domain has been found to cross-link to preproteins, thought to indicate a role in preprotein binding. The pre-protein cross-linking domain is comprised of two sub domains that are inserted within the ATPase domain [[cite:PUB00014329]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016020
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Subterm of
GO:0017038
Biological process Protein import The targeting and directed movement of proteins into a cell or organelle. Not all import involves an initial targeting event.
Subterm of

Associated Lotus transcripts 4

Transcript Name Description Predicted domains Domain count
Lj0g3v0312149.1
– PREDICTED: protein translocase subunit SecA, chloroplastic-like isoform X3 [Cicer arietinum] gi|502117549|ref|XP_004495859.1|
Domains
19
Lj5g3v0321370.1
– PREDICTED: protein translocase subunit SECA2, chloroplastic-like [Cicer arietinum] gi|502136002|ref|XP_004502527.1|
Domains
24
Lj5g3v0321370.2
– PREDICTED: protein translocase subunit SECA2, chloroplastic-like [Cicer arietinum] gi|502136002|ref|XP_004502527.1|
Domains
24
LotjaGi1g1v0265900.1
– Protein translocase subunit SecA; TAIR: AT1G21650.2 Preprotein translocase SecA family protein; Swiss-Prot: sp|D8WUA4|SECA2_ARATH Protein translocase subunit SECA2, chloroplastic; TrEMBL-Plants: tr|K7KUK2|K7KUK2_SOYBN Protein translocase subunit SecA; Found in the gene: LotjaGi1g1v0265900
Domains
28

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd18803 CDD 1 25.00