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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0404930 |
| Transcript ID | Lj5g3v0404930.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Cytochrome c oxidase assembly protein COX15-like protein [Medicago truncatula] gi|357495241|ref|XP_003617909.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 455 | 455 | 1.40E-249 | – | |
| PANTHER | 1 | 455 | 455 | 1.40E-249 | – | |
| Phobius | 1 | 97 | 97 | – | – | |
| Hamap | 96 | 440 | 345 | 22.49 | ||
| TMHMM | 98 | 120 | 23 | – | – | |
| Phobius | 98 | 119 | 22 | – | – | |
| Pfam | 101 | 430 | 330 | 2.10E-115 | ||
| Phobius | 120 | 182 | 63 | – | – | |
| TMHMM | 183 | 200 | 18 | – | – | |
| Phobius | 183 | 201 | 19 | – | – | |
| Phobius | 202 | 212 | 11 | – | – | |
| TMHMM | 213 | 232 | 20 | – | – | |
| Phobius | 213 | 231 | 19 | – | – | |
| Phobius | 232 | 250 | 19 | – | – | |
| Phobius | 251 | 274 | 24 | – | – | |
| TMHMM | 252 | 274 | 23 | – | – | |
| Phobius | 275 | 294 | 20 | – | – | |
| Phobius | 295 | 315 | 21 | – | – | |
| TMHMM | 295 | 314 | 20 | – | – | |
| Phobius | 316 | 357 | 42 | – | – | |
| Phobius | 358 | 376 | 19 | – | – | |
| TMHMM | 358 | 375 | 18 | – | – | |
| Phobius | 377 | 387 | 11 | – | – | |
| TMHMM | 388 | 410 | 23 | – | – | |
| Phobius | 388 | 411 | 24 | – | – | |
| Phobius | 412 | 416 | 5 | – | – | |
| TMHMM | 415 | 437 | 23 | – | – | |
| Phobius | 417 | 437 | 21 | – | – | |
| Phobius | 438 | 455 | 18 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Heme a biosynthetic process | The chemical reactions and pathways resulting in the formation of heme a, a derivative of heme found in cytochrome aa3. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Oxidoreductase activity, acting on the CH-CH group of donors | Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj5g3v0404930.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0404930.1, powered by CORGI.
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