Domain Predictions — View

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PF02628

Source: Pfam

Description

Cytochrome oxidase assembly protein

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0006784 View details of GO:0006784 AmiGO InterPro QuickGO	Biological process	Heme a biosynthetic process	The chemical reactions and pathways resulting in the formation of heme a, a derivative of heme found in cytochrome aa3.	Subterm of GO:0006783 GO:0046160
GO:0016021 View details of GO:0016021 AmiGO InterPro QuickGO	Cellular component	Integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.	Subterm of GO:0031224
GO:0016627 View details of GO:0016627 AmiGO InterPro QuickGO	Molecular function	Oxidoreductase activity, acting on the CH-CH group of donors	Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.	Subterm of GO:0016491
GO:0055114 View details of GO:0055114 AmiGO InterPro QuickGO	Biological process	Oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.	Subterm of GO:0008152

Associated Lotus transcripts 9

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0229999.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cytochrome c oxidase assembly protein COX15-like [Glycine max] gi\|356501669\|ref\|XP_003519646.1\|	Domains CYTOPLASMIC_DOMAIN IPR003780 NON_CYTOPLASMIC_DOMAIN PF02628 PTHR23289 PTHR23289:SF2 TMhelix TRANSMEMBRANE	8
Lj0g3v0230009.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains CYTOPLASMIC_DOMAIN IPR003780 NON_CYTOPLASMIC_DOMAIN PF02628 PTHR23289 PTHR23289:SF2 TMhelix TRANSMEMBRANE	8
Lj2g3v3335060.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cytochrome c oxidase assembly protein COX15-like [Cicer arietinum] gi\|502099712\|ref\|XP_004491543.1\|	Domains CYTOPLASMIC_DOMAIN IPR003780 NON_CYTOPLASMIC_DOMAIN PF02628 PTHR23289 PTHR23289:SF2 TMhelix TRANSMEMBRANE	8
Lj5g3v0404930.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytochrome c oxidase assembly protein COX15-like protein [Medicago truncatula] gi\|357495241\|ref\|XP_003617909.1\|	Domains CYTOPLASMIC_DOMAIN IPR003780 IPR023754 MF_01665 NON_CYTOPLASMIC_DOMAIN PF02628 PTHR23289 PTHR23289:SF2 TMhelix TRANSMEMBRANE	10
LotjaGi1g1v0011600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Heme A synthase; TAIR: AT5G56090.1 cytochrome c oxidase 15; Swiss-Prot: sp\|Q9FKT8\|COX15_ARATH Cytochrome c oxidase assembly protein COX15; TrEMBL-Plants: tr\|A0A151U2K9\|A0A151U2K9_CAJCA Cytochrome c oxidase assembly protein COX15 isogeny; Found in the gene: LotjaGi1g1v0011600	Domains CYTOPLASMIC_DOMAIN IPR003780 IPR023754 MF_01665 NON_CYTOPLASMIC_DOMAIN PF02628 PTHR23289 PTHR23289:SF2 TMhelix TRANSMEMBRANE	10
LotjaGi1g1v0011600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Heme A synthase; TAIR: AT5G56090.1 cytochrome c oxidase 15; Swiss-Prot: sp\|Q9FKT8\|COX15_ARATH Cytochrome c oxidase assembly protein COX15; TrEMBL-Plants: tr\|A0A151U2K9\|A0A151U2K9_CAJCA Cytochrome c oxidase assembly protein COX15 isogeny; Found in the gene: LotjaGi1g1v0011600	Domains CYTOPLASMIC_DOMAIN IPR003780 IPR023754 MF_01665 NON_CYTOPLASMIC_DOMAIN PF02628 PTHR23289 PTHR23289:SF2 TMhelix TRANSMEMBRANE	10
LotjaGi5g1v0043500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Heme A synthase; TAIR: AT5G56090.1 cytochrome c oxidase 15; Swiss-Prot: sp\|Q9FKT8\|COX15_ARATH Cytochrome c oxidase assembly protein COX15; TrEMBL-Plants: tr\|A0A151U2K9\|A0A151U2K9_CAJCA Cytochrome c oxidase assembly protein COX15 isogeny; Found in the gene: LotjaGi5g1v0043500	Domains CYTOPLASMIC_DOMAIN IPR003780 IPR023754 MF_01665 NON_CYTOPLASMIC_DOMAIN PF02628 PTHR23289 PTHR23289:SF2 TMhelix TRANSMEMBRANE	10
LotjaGi5g1v0043500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Heme A synthase; TAIR: AT5G56090.1 cytochrome c oxidase 15; Swiss-Prot: sp\|Q9FKT8\|COX15_ARATH Cytochrome c oxidase assembly protein COX15; TrEMBL-Plants: tr\|A0A151U2K9\|A0A151U2K9_CAJCA Cytochrome c oxidase assembly protein COX15 isogeny; Found in the gene: LotjaGi5g1v0043500	Domains CYTOPLASMIC_DOMAIN IPR003780 IPR023754 MF_01665 NON_CYTOPLASMIC_DOMAIN PF02628 PTHR23289 PTHR23289:SF2 TMhelix TRANSMEMBRANE	10
LotjaGi5g1v0043500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Heme A synthase; TAIR: AT5G56090.1 cytochrome c oxidase 15; Swiss-Prot: sp\|Q9FKT8\|COX15_ARATH Cytochrome c oxidase assembly protein COX15; TrEMBL-Plants: tr\|A0A151U2K9\|A0A151U2K9_CAJCA Cytochrome c oxidase assembly protein COX15 isogeny; Found in the gene: LotjaGi5g1v0043500	Domains CYTOPLASMIC_DOMAIN IPR003780 IPR023754 MF_01665 NON_CYTOPLASMIC_DOMAIN PF02628 PTHR23289 PTHR23289:SF2 TMhelix TRANSMEMBRANE	10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	11.11