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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0054500 |
Transcript ID | LotjaGi1g1v0054500.4 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase family protein; TAIR: AT5G10270.1 cyclin-dependent kinase C;1; Swiss-Prot: sp|Q9LFT8|CDKC1_ARATH Cyclin-dependent kinase C-1; TrEMBL-Plants: tr|I1JIS7|I1JIS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0054500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:7666142..7669552) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGAAGGAGATCGAAACCGGTGAAATCGTTGCTCTGAAGAGGATACGGATGGACAATGAGAGAGAAGGGGTATGTTA ATTCTTTGAGTCTTGAATGTTTAATTTTTTTACTTAGATTATGGGTGCATAACATATTTTCATTGTACATGTTATTCAGT TGGCCTAAATCAGAATTTGCAGTCAAAGTCTGTTAGTTCTGTATTGTGAATTTCTCCTAGGAACTGTATTGTAAATTTTT TCATTGCAGTTTCCTATAACTGCTATACGAGAAATCAAAATTTTAAAGAAACTGCACCATGAGAATGTGATCGAGCTGAA AGAAATTGTGACTTCGCCAGGTATACTTTAAAGATATAGATGTGCTTTGTTTTCAAAATGGTTTAGGATTTATAAATAAC ATTGTGTTTCTTCTTTCAGGCCCTGAGAGAGATGGACAAGGAAGGCCAGGCAAGTCATCCGTTCTCACATTATTAGCTAA TTACTGAATAATAGTACTCATCTATTTTCATATTATTAGCCAATTACTGAATAATAGTACATAACATGCTTTATAGCTCT AGCTGTGTGAATATATCCATCAACTCCCATTGGATTCTCTTTGTTCCATACTAACCTTTTTCACTTGTTTCTCATTGTTG TTTTTGGGATTGCAGATGGTAACAAATATAAAGGTGGTATTTACATGGTCTTTGAATACATGGACCATGATTTAACAGGT CTTGCTGACCGACCTGAAATGAGATTTACAGTTCCTCAAATTAAGGTACGAGTGTTTATACTAATAATTGATTTTTCATA TATTAATATTTGTTTATTTTGATGTTGTCTGAGTTGCGTTTCCTTTCTTAAGTGTTATATGAGACAGCTTTTGACGGGGC TTCACTACTGTCATGTAAATCAAGTACTTCATCGTGATATCAAAGGTCTGTGTATTAACAGGGTTATGGTTTTAGATCAG AATGTTGGAAATATTACTACTTTTTGATGTATTTTATTCTGCTGCAGGATCAAATCTTCTTATAGACAATGAAGGAAATT TGAAGCTTGCAGATTTTGGACTGGCACGATCATTTTCTAGTGAGCAAAATGCAAATCTTACAAATCGTGTCATTACGTTA TGGTACAGGTAATTGGTGTCAAATTTTTCTTGAGGAGATTGAATAGGGCAGAGGGAGGGGCTATTTGATTGGCAAGTGCA TGTATTGAGTTTGTTTTATTTATGTAGACCGCCTGAGTTGCTTCTGGGGACAACGAAGTATGGACCAGCTGTAGATATGT GGTCTGTTGGGTGCATTTTTGCTGAGCTTCTTCATGGGAAGCCCATTTTTCCTGGGAAAGATGAGGTTAGTGATATTTTA TATATGATAGTTAAGAGAAATGGGTGCCGAAGTGGTGAGTGATTGATGTGGTGTAGTATTTAGGGTAGATTTGATTTTAT CCTGTATATTGCCAGTAGGAAAAAAAAGATTCTTTATATTACATTCTGATTCTCCGGATTCAGTCTCTAAATACATCCTG CCATATTCCTTTCTCTGCATATTATAAGCATATCTCAGTGCAACTCAATTGTTATGATCATTGATGTCTATGTATTTCGA ATCTATGGATTCTACTGAAACATAGTACGCTAATAACAATGTTTGGCTAGACTGTTGCATCTAATTTGCTCAATACTTTT CAGAAATCTCATTATTACATCTTTGTCATATCTTGCTTGTATTATATATGGCCTATGCTTTATATCCTAATGGTAATATT TTTTGGTACAGCTTAAATGTAATACATCTTTTGTTTGTAATTATTGTAGCCAGAACAATTAAACAAAATATTTGAGCTGT GTGGAGCACCAGATGAGGTCAATTGGCCTGGGGTTTCTAAGACACCTTGGTATAATCAATTTAAGCCATCAAGGCCAATG AAAAGACGTTTGAGGGATGTTTTCAGGCAGTAAGTATCAAGGCTTGAGCATCATCACTAAGCATATATGTACTTTTATCC ACCTAGGAAATAAGGATACAGTCCATATTCTGTGCTTGTAAATTTATCTAAATAGCTTGTTTCCCTGTGACTTTATAGTT TTGATCGTCATGCTCTAGAATTGTTGGACAAGATGCTGACACTTGATCCGGCTCAGGTATCATTTCTTCACTTGTGGGTC TGATTTATTAATTGTTAAATGATTTTGAATTGCTATTTTAAGTGCTTCAATTCCCTGTTATTCCTGTTTTATTTTATATC ACTCGACCTGTTTTATATGACGAGGTTAGCCATAGCTACTATTGTTATTTTGTTATTATTATGTATCTCATATACTGACA GATCTCATACTATGCGTAAGATAAAAATGGTGTACATCTGGTTTCCTTTGTGAGAAACTTTCGTAATGTAATAAAAAAAA TTGAGACAAGAAAAAAAAAAGAATTGATGGCATAATGCTAGTTTAGACGACTTTGAGAAGTTTTTTTTTTTTTTGCTATG AATATGTCATTTGTAACATAGTTGGGTTTGTGTTATGATTTGCTTATTCACCTCTAGGCTATATGCTTTATGAAAATTAA TTTTGTTCATGATTTGTTTCTTAATATTTGTTTGTAAATTTGATTTTTGTAGAGAATTACGGCGAAAGATGCACTTGATG CTGAGTATTTCTGGACAGATCCATTACCATGCGATCCCAAGAGGTAAGACCTAGTTTCTATTTTCAAAATATTAATTTTC CTTGAAATTGTTAGATCGTGATAGGAATAAATACTTGTTCCATTCACTCCTTCGGCTCCTTCCCTTTTAACTTTATTTTG TTTTATGCAACTAATCATTTACTGGTCAACATTCTTCAACTTGCTACTTCTCTTTTGTGTGGCTTAGTTTACCCAAGTAT GAGTCATCACATGAATTTCAAACAAAGAAAAAGCGCCAGCAACAAAGGCAAAATGAAGAAATTGCAAAGCGTCAGAAAAT GCAACAACCACAGCCGCACACTCGTCTTCCCCCAATTCAGCAGCCTGGGCAACATGCCCAAATGCGGTCAGGATCTAAGC AGCCAATTCATGGCTCTCAACCTCAAGTTGTTGCAGGACCTTCTCATCATTATGGGAGGGCTCGAGGTCCACCTGGTGGG CCAGGAAGATATCCTCCCAGTGGAAACCCCAGCGGAGGATACAATCACCCAAATCGTGGAGGTCAAGGAGGAGGTGGTTA CGGCAGCGGGCCTTATCCTCCTCAAGGGCGAGGGGCACCTTATGGGTCCAGTGGTATGCCTGGTGGTGGTCCTCGTGGTG GAGGTGGCGGTTATGGGGCTGGAGCTCCAAACTATCCTCAACAAGGCGGTCCATATGGGGGCTCAGCAGCTGGTCGTGGC TCAAACATGATGGGTGGAAATCGCAATCAACAGTATGGTTGGCAGCAATAA
CDS sequence (LotjaGi1g1v0054500.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAAGGAGATCGAAACCGGTGAAATCGTTGCTCTGAAGAGGATACGGATGGACAATGAGAGAGAAGGGTTTCCTAT AACTGCTATACGAGAAATCAAAATTTTAAAGAAACTGCACCATGAGAATGTGATCGAGCTGAAAGAAATTGTGACTTCGC CAGGCCCTGAGAGAGATGGACAAGGAAGGCCAGATGGTAACAAATATAAAGGTGGTATTTACATGGTCTTTGAATACATG GACCATGATTTAACAGGTCTTGCTGACCGACCTGAAATGAGATTTACAGTTCCTCAAATTAAGTGTTATATGAGACAGCT TTTGACGGGGCTTCACTACTGTCATGTAAATCAAGTACTTCATCGTGATATCAAAGGATCAAATCTTCTTATAGACAATG AAGGAAATTTGAAGCTTGCAGATTTTGGACTGGCACGATCATTTTCTAGTGAGCAAAATGCAAATCTTACAAATCGTGTC ATTACGTTATGGTACAGACCGCCTGAGTTGCTTCTGGGGACAACGAAGTATGGACCAGCTGTAGATATGTGGTCTGTTGG GTGCATTTTTGCTGAGCTTCTTCATGGGAAGCCCATTTTTCCTGGGAAAGATGAGCCAGAACAATTAAACAAAATATTTG AGCTGTGTGGAGCACCAGATGAGGTCAATTGGCCTGGGGTTTCTAAGACACCTTGGTATAATCAATTTAAGCCATCAAGG CCAATGAAAAGACGTTTGAGGGATGTTTTCAGGCATTTTGATCGTCATGCTCTAGAATTGTTGGACAAGATGCTGACACT TGATCCGGCTCAGAGAATTACGGCGAAAGATGCACTTGATGCTGAGTATTTCTGGACAGATCCATTACCATGCGATCCCA AGAGTTTACCCAAGTATGAGTCATCACATGAATTTCAAACAAAGAAAAAGCGCCAGCAACAAAGGCAAAATGAAGAAATT GCAAAGCGTCAGAAAATGCAACAACCACAGCCGCACACTCGTCTTCCCCCAATTCAGCAGCCTGGGCAACATGCCCAAAT GCGGTCAGGATCTAAGCAGCCAATTCATGGCTCTCAACCTCAAGTTGTTGCAGGACCTTCTCATCATTATGGGAGGGCTC GAGGTCCACCTGGTGGGCCAGGAAGATATCCTCCCAGTGGAAACCCCAGCGGAGGATACAATCACCCAAATCGTGGAGGT CAAGGAGGAGGTGGTTACGGCAGCGGGCCTTATCCTCCTCAAGGGCGAGGGGCACCTTATGGGTCCAGTGGTATGCCTGG TGGTGGTCCTCGTGGTGGAGGTGGCGGTTATGGGGCTGGAGCTCCAAACTATCCTCAACAAGGCGGTCCATATGGGGGCT CAGCAGCTGGTCGTGGCTCAAACATGATGGGTGGAAATCGCAATCAACAGTATGGTTGGCAGCAATAA
Protein sequence (LotjaGi1g1v0054500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKEIETGEIVALKRIRMDNEREGFPITAIREIKILKKLHHENVIELKEIVTSPGPERDGQGRPDGNKYKGGIYMVFEYM DHDLTGLADRPEMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSSEQNANLTNRV ITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKTPWYNQFKPSR PMKRRLRDVFRHFDRHALELLDKMLTLDPAQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEEI AKRQKMQQPQPHTRLPPIQQPGQHAQMRSGSKQPIHGSQPQVVAGPSHHYGRARGPPGGPGRYPPSGNPSGGYNHPNRGG QGGGGYGSGPYPPQGRGAPYGSSGMPGGGPRGGGGGYGAGAPNYPQQGGPYGGSAAGRGSNMMGGNRNQQYGWQQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 468 | 468 | 7.0E-260 | – | |
ProSiteProfiles | 1 | 284 | 284 | 40.753 | ||
Gene3D | 1 | 81 | 81 | 2.0E-25 | – | |
PANTHER | 1 | 468 | 468 | 7.0E-260 | – | |
CDD | 1 | 284 | 284 | 0.0 | – | |
SMART | 1 | 284 | 284 | 1.3E-76 | ||
SUPERFAMILY | 2 | 292 | 291 | 1.03E-88 | ||
Pfam | 2 | 284 | 283 | 3.5E-66 | ||
Gene3D | 82 | 324 | 243 | 4.0E-78 | – | |
ProSitePatterns | 119 | 131 | 13 | - | ||
MobiDBLite | 295 | 475 | 181 | - | – | |
MobiDBLite | 297 | 322 | 26 | - | – | |
MobiDBLite | 323 | 360 | 38 | - | – | |
MobiDBLite | 461 | 475 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0054500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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