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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0091000 |
| Transcript ID | LotjaGi1g1v0091000.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT1G07570.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q06548|PBL9_ARATH Probable serine/threonine-protein kinase PBL9; TrEMBL-Plants: tr|I3SV89|I3SV89_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0091000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:13230136..13232500) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAGAGCTTCACCTTTGGTGAGCTTAAAACCTCGACAAGGAACTTTCGTCCCGATAGTATGGTCGGCGAAGGTGGGTT TGGTTGTGTATATAAGGGCTGGATAGATGAGCAGTCACTTGCCCCAGCTAGACCGGGAACTGGAATGGTCATTGCTGTAA AGAGGCTTAACCAAGAAGGTTTGCAGGGACACAGTGAATGGCTGGTGAGTGTCTTTTGGCAGAGCTTATTTACACTCTGG AACTTTGCTCAAAGCCTGAGAATTTAAGATACAGTTCCACTTTAAAGTTTAGGAAAATGTTAAGTTAGTGCATGTTTGGA AACTCTTCTACAATTAATTTTGAAGGTAGAATCAACTCCGGGATGAAGCTTCTGAGAGTATGTTTTAGATTTCAGGATTG ATTCTGATCAAAGAGAAGGTGATCCAAACATGCTATTAGTTTAATGGGATGATTTTGGGAACTTATCCTTTTCTATTAGA TGGAACAAATAGTTAATACTTTAGATGATTTGTTATTTTGATGTAACTAATTAGCCTTATGCTATAGACAGAAATCAACT ACCTGGGGCAGCTGCATCATCCTAATCTTGTGAGACTGGTTGGTTACTGCGTAGAGGATGACCAACGGCTTTTGGTATAT GAATTTTTAACCAAGGGGAGTTTGGACAATCATTTATTTAGGAGTAAGTTATTGATTTTCCTTCAAATTTTTCTATGGAG TAAGATTAATTCAGTACCTTGAACACCTCTAATTGTCATTTACCTATTCTATTTATAACAGGGGGTTCTTACTTTCAACC TCTTTCTTGGAGCATCCGCATGAAGGTTGCTCTTGATGCTGCTAAGGGTCTTGCATATCTTCACAGTGATGAAGCAAAAG TGATATATCGAGACTTCAAAACTTCAAATATATTGCTTGATTCGGTTAGCATATCTATCTCATGGATCTTACAATTTACT AGTCATACATACTGGCCTTTCTAACATCTATTTGTTGATGACAGAATTATCGCGCAAAACTTTCTGATTTTGGCTTGGCA AAGGATGGACCAGTGGGTGATAAGAGCCATGTGTCTACAAGGGTAATGGGCACATATGGCTATGCTGCTCCTGAATATAT GGCCACAGGTACCAAATTTTGCAGGATGCTTAAGCTTATGATCTCTTTAATTTGTCATAACATACCATATTTCTTTTGCA TATGACATAATCCTATCTTCTAAATTATTTTGCATTGACTATATAAATATAATACATTACCTTTTACCGGGAAAATGAAA CCCTTAACCCTTATGAGTTCTTTTTCAAACCAGAGTGTAGTTTCTTAGCTTCTTTTCTCCCTATATTAGCAAGCCATAGT TATGCACCACTTGACATTTGATCCTACTATAGTATCTTGCATTTTACTGGGTTAGCATTTGGAACAAGAGGTGCTGCCAT GTGACTAGGAGGCACTGGTTCAAACTGTTAAATTAACCTCTTGCAAACTCTATGTTTGGCTGCCTGTAGTAGGCCCAAAA TCGGTTAGGCTTTTCCCTAGACCCATCACAGCAAGAGTTTTGTTACAGTGAGCTGCCATTTTAGCATTTGGACCCAACAG ATTCTATGCCTCCATATTCTTGGATTTTCAATAACATCCACCACCAGTTGACTCATTTTTATAATAAGACATCATCATTC AATGTAAACTGAACTGTTTTTAGTTTTCACTTGCTCAACAATGCATCTCAAATCCAGAAATGAACTATTAGCATCTTCGA ATTAGCTTCTATTTTCTCAGACTCAATTCTAACACACAGAAGCTTCTGTCCATAATAGAATTCGACTTTAGACTCAATTA TAAAATGACTTCTAATCATCCACCAACATGTTCACTTAGCTGGGTGAAGTTAATTCCTAGTTTTCCCTCCTGACCTGTGT TTTTTCCCCATTGTTTTTTTGTGAAGGTCACTTGACCAAAAAGAGTGATGTATACAGCTTTGGAGTTGTTCTCCTTGAAA TCATGTCCGGCAAACGAGCCCTTGACCAGAACAGACCATCCGGGGAGCACAATTTGATTGAGTGGGCAAAACCTTACCTC AGCAACAAGCGCAGGATCTTCCAAGTTATGGATGCTCGAATTGAAGGCCAATACACATTACGCGAAGCAATGAAGGTAGC TAACCTTGCAATTCAATGCTTGTCTGTGGAACCAAGATTCAGACCGAAAATGGATGAGGTGGTGAGTGTGTTGGAGGAAC TTCAGGGTTCTCATGATGACACAGCTGGAGGAGTGGGAACTTCTAGAGATCAGCGTGCTAAAAGGAATGTTCATAGTGGT CCTAAGCAGCATAGAAGTAAACAAAGTGGAATAACTGTCCAGTGA
CDS sequence (LotjaGi1g1v0091000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAGCTTCACCTTTGGTGAGCTTAAAACCTCGACAAGGAACTTTCGTCCCGATAGTATGGTCGGCGAAGGTGGGTT TGGTTGTGTATATAAGGGCTGGATAGATGAGCAGTCACTTGCCCCAGCTAGACCGGGAACTGGAATGGTCATTGCTGTAA AGAGGCTTAACCAAGAAGGTTTGCAGGGACACAGTGAATGGCTGACAGAAATCAACTACCTGGGGCAGCTGCATCATCCT AATCTTGTGAGACTGGTTGGTTACTGCGTAGAGGATGACCAACGGCTTTTGGTATATGAATTTTTAACCAAGGGGAGTTT GGACAATCATTTATTTAGGAGGGGTTCTTACTTTCAACCTCTTTCTTGGAGCATCCGCATGAAGGTTGCTCTTGATGCTG CTAAGGGTCTTGCATATCTTCACAGTGATGAAGCAAAAGTGATATATCGAGACTTCAAAACTTCAAATATATTGCTTGAT TCGAATTATCGCGCAAAACTTTCTGATTTTGGCTTGGCAAAGGATGGACCAGTGGGTGATAAGAGCCATGTGTCTACAAG GGTAATGGGCACATATGGCTATGCTGCTCCTGAATATATGGCCACAGGTCACTTGACCAAAAAGAGTGATGTATACAGCT TTGGAGTTGTTCTCCTTGAAATCATGTCCGGCAAACGAGCCCTTGACCAGAACAGACCATCCGGGGAGCACAATTTGATT GAGTGGGCAAAACCTTACCTCAGCAACAAGCGCAGGATCTTCCAAGTTATGGATGCTCGAATTGAAGGCCAATACACATT ACGCGAAGCAATGAAGGTAGCTAACCTTGCAATTCAATGCTTGTCTGTGGAACCAAGATTCAGACCGAAAATGGATGAGG TGGTGAGTGTGTTGGAGGAACTTCAGGGTTCTCATGATGACACAGCTGGAGGAGTGGGAACTTCTAGAGATCAGCGTGCT AAAAGGAATGTTCATAGTGGTCCTAAGCAGCATAGAAGTAAACAAAGTGGAATAACTGTCCAGTGA
Protein sequence (LotjaGi1g1v0091000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKSFTFGELKTSTRNFRPDSMVGEGGFGCVYKGWIDEQSLAPARPGTGMVIAVKRLNQEGLQGHSEWLTEINYLGQLHHP NLVRLVGYCVEDDQRLLVYEFLTKGSLDNHLFRRGSYFQPLSWSIRMKVALDAAKGLAYLHSDEAKVIYRDFKTSNILLD SNYRAKLSDFGLAKDGPVGDKSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYSFGVVLLEIMSGKRALDQNRPSGEHNLI EWAKPYLSNKRRIFQVMDARIEGQYTLREAMKVANLAIQCLSVEPRFRPKMDEVVSVLEELQGSHDDTAGGVGTSRDQRA KRNVHSGPKQHRSKQSGITVQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 101 | 101 | 4.0E-33 | – | |
| PANTHER | 1 | 340 | 340 | 1.1E-220 | – | |
| PANTHER | 1 | 340 | 340 | 1.1E-220 | – | |
| SUPERFAMILY | 3 | 298 | 296 | 6.97E-79 | ||
| ProSiteProfiles | 16 | 301 | 286 | 39.156 | ||
| Pfam | 20 | 298 | 279 | 7.7E-47 | ||
| CDD | 22 | 301 | 280 | 1.47487E-92 | – | |
| ProSitePatterns | 22 | 54 | 33 | - | ||
| Gene3D | 102 | 319 | 218 | 2.7E-60 | – | |
| ProSitePatterns | 147 | 159 | 13 | - | ||
| MobiDBLite | 305 | 341 | 37 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0091000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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