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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0101500 |
| Transcript ID | LotjaGi1g1v0101500.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | p-loop containing nucleoside triphosphate hydrolases superfamily protein, putative; TAIR: AT1G65810.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|O94387|YGSA_SCHPO Uncharacterized ATP-dependent helicase C29A10.10c; TrEMBL-Plants: tr|G7KFN9|G7KFN9_MEDTR p-loop nucleoside triphosphate hydrolase superfamily protein; Found in the gene: LotjaGi1g1v0101500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:15460415..15466370) extracted from Lotus japonicus Gifu genome v1.2.
GTTTTTCTGCAAATAGTGGCGCTCTCAAGCCTAACTTCGTCAGTCGTCACCATGTTACACATACATACAACATGTGTTTT GGTAATCACAGAAGGGGTTTTCAGTTTTCACTGTTTTGTGGTTCATCTTGCTAGTTATTATCACTCTTATTTTTTCATCG TTGTCTAGAAATTAAGTTCTAAACATTTTCAAAATTCTTCAATAAAGTATGAGGATAGTGCTGTCAGAATTTCTTTAACC AATTCATGAAATCCAAATTTTTTTTTTTGGATGACTGATCTGCATTGACTTAGTAGAACCCACAAAAAAAGTTTGAAACT TTCACTATCTGAGAGGACATTTGGTTTCGCTTTTAATACTCCTAGTTCTAAGAGTTATTTCTCTTGTTATAGAAGTTACT ACTACTAGCTTCTTCCATAATCACTTCTCCCCAGAATGTGAAAACCTACAAATTTATTTACCATCATAATTATTGTGTAT TTTAAACACTTCAAATAGCAGTTTTGTGTATCCCTGACACGTGTTTTGAAGTGATTTGCATCCCTAATATGTGGTTTGAA GAAATGTTGTTAATCGCGCATCGTGGGAAATAGCGGAAAGGCAGAAATAGTTTATATCTTAGCGAAAAAATAGTGGATAG CGGTGAGCCCTTAGAGAGCTATGCTATAGCGCCAAGTGTCGTGATATCGGCTATTTGACAACATTGATTTGGAGTGATTC TGTGGAAAATACTTCAGAAAGCTTTCTGATGTTGGTACATCATGCACTGTTTTTAGTCAAACATTTATAATAAAAATGCA ATGCTTAATGTTGAAGCAAAGAATTTTGCTAGCTATAGTTGGTCTTCTACAGAGTCAACCTCCTCTTGTTCTAACTTGAT TTTTTACATACACTGCATATAACCATTACGCACACTTTTTACACTCTTGGTATATTTAGTTGTGACTTTCTATTTAGTTA AAGTTGCTTTATTAAAGATTCATAACTTGTGATATCTTCTTTTTCTCACTTTCATCATGGATAGGTAAATGTGATGTAGC TGTTGAGAAGCTGTGAATGATATTGCTGTCACTGATTGATTTAGAGTTGAGAGAAAAAGAAGTGATAAGGAGCAAGGATG CAGAATTATCATACCACAAGGGAAAATTTTGTGAACGACTTGATAGATATTGTATTCTCTTGGACTCTTGAGGATGCTCT CACTGAAAATCTCTTCAAATACCAGGTTATTTTCCATTTTTGAATACACTAGCATTGGAAAGCACAATAATCACCCCTTT TAAGAAAATTTGCATCCCTTTTCTCAAATTTTTAATTGAGAATTACTGTTAGAACTTATAAGCTTATTAGCTTTCTGTGT CTCTTCTGTTGCTTGTCCAATGATTGTCCTTATAAATGCGAAAATAGATTTGAAATTGCCTAATATTTATGTGTGTTTGG ATATCAGTTGAGTGCAACAAGAACGGAGTTTCATCTTAATCCATAAGAAGTGTTTCATTCACTTTTTACGTTAAAGTACA TGGTCAAGTTCGTTTACACTTGTCCTGACAAATATTCATTCATATCCTTAAGTACTAGTATTTTTCTAATTTTCTTATGC CTGCTCTTGATTTTTCTGTTGTGTAATATGTGAAACATAATTGTACCAAGCTCACATTTGTAGAACCATCTAAGTCCTTG TGAAGGGTAGCTTGAAACATTGTTGTTTTCTTGCAGATACCGAAGATACCAAAAACATTCATGTCAATAAAACATTACAT GAATTCATTCATCCCTGCATTGATTGAAGAAACTCATAGTGAACTGTATTCAGGCTTGATAAGCGTGTCTCAAGCTCCTT TTTGTGAAATCTCGACAATTGAACCATCCAGGGACTTCAATCCTCCCATGGGCTTGTTCTATAAGATTAAATTGAAGAGC ACCACTGAGGATGTCCAAGCTGTAAGAAAATATGTACCTGAGGTTGGAGATATCTTTGCATTCACAACTATTAGACCGAG AAGTGTAGATGACTTGAACATGCCCGAAAACTACTACCATATCGCTTATGTTGAAAGGAAAAAAGATGAATACACTGATG AGATCTCTATATTGTCATCCAATGACATGGAGTTGGATGCTAAAACTGACTTCAGTAGTAACAAAGCACAAAAGCTTTAT GCTGTCTTTCTTATGAACATGACAACAAATGTTCGGATTTGGAAAGCCTTGCACCATGAGTTGGAGGCTGCAAACATGAA CCTTGTTTGGGAAGTGGTGCAAGCTGATGCGAAAGTAAGAATCACCAAATCAATTTATTCATGATAAGCTCCTATTTAAT GAAGAAAAATACTATAAAGCTCCTTACACAATTTACAGACATTTAACTTTTGAGTACTATCAAAATTTTCTGCATGGGAA CTGGTTTTGAAAAGTTCATGGATTGTCTTCTTTAATTGACAAGATGCTATACTGCTATGTATGTTTATTTTCAATCCTTG TAAAACAAGACCTTCATTCTAGACTTAGGTCCTCTTTGGAAGAGTAAATTTGAGTTTATCTTATAGCATAAGTGCTTTGG CAAGTGTCTGGAAGAGCTTATGTAAATAGCTTTCTATGACATACCTATAAGCTGTTTTGAGCATAATTTCATAAGCTGCT CATATTAGCTTATAAATAAGCACTTATAACTACTTGTAACCTATTTTGAACTTATTTCAATAAGCTTCTCCAATTAGCTT ATAAATAAGCACTTTTTATTTTATTTTTCATGTTTGCATTTCCTTCTGCAGAGACAGCAGAGTGGAGAAAACTGTCCCAT TTGCTTATCTGGAGAAAATCTCAGTCCAGGCTATTCTCAAGTACAAAACATAATCAGAGCTCAGAATTTAAATGAATCTC AAAAGGAGGCTGTTTTAAGCTGTTTTACTATGAGAAAATGTCATCATAATAGTGACCCCATAAAACTCATATGGGGTCCT CCAGGGACAGGCAAAACAAAAACAGTTGCTTCCTTGTTGTTTTGCCTTCTGAAGTCAAGAATCAGAACACTGACATGTGC TCCAACTAATACTGCAGTGATAGCAGTAGCAACTCGCCTTCACAGCATAGTTAAGGATTTACATGAATATGATACATATG GTCTTGGTGATGTAGTGCTGTTCGGCAATGGTGAAAGATTGAACATAGATAATCATAAGAGTCTTCAGGAAGTGTTTCTG GATCGTAGAGTGAAAGAATTGTTGCCATGTTTTCTTCCATTGACTGGATGGAAACATTACTTGGAATCAATGATCAAGTT ACTAAAGGATCCCAAAGAGCAATATGCTAAATATAATAAGCGCGATGTGAATGATGGTGAGGAGGATCTGATGTCATTAG AAGAATTTGCTAAGAAAAGTTGTCCTAATCTAGAAGCTGTATATAATTCATACAAGAAGCGTGGTAAGAGTCTTGTTCCT ATCACATTGACGGAATTTGTGAAAAAGAGATATGACCATATAGTGGAGCAATACCAAATCTATGGAGATGAGAAAAAGTT AAATGCCGGTATGACTATGGAGGAATTTGTTAGGCAGAGATTCAGTTTCATAGGAGAGAAGCTCAAGATACTCATGCGAA CCTTGTACACACACTTACCGACATCTTTCATTCCATTAAAGGTGGTTAAGAAAATGTTTACAGCTCTGGACTTGCTAAAA TCTCTTGAAATTTCGTTGCGGCAAACCAAGTCCATTCAAGCTCTTCATGATTCTGAAGACGGACAAAAGCACTTTAAATG GTTAAGCTCCAACAAAGACATGCTACTGTGCGCCCTGATTTCACTTTCTATGCGGATTCAGCTTCCCAATATTATAAGCA AATATAGCATATCAGAATTTTGCTTGAGTAATGCATGCCTAGTCTTTAGTACAGCATCAAGTTCTTCTAAATTGTACACA AAAGGAATGACAGAAGTGAAATTCCTAGTTATTGATGAAGCAGCACAGCTAAAAGAATGTGAATCAAACATTCCATTACA GCTACCAGGCCTCCATAGTTGTGTCCTCATAGGTGATGAGAAACAGCTCCCAGCAATGGTCAGAAGCAAGGTATTTAAAA CTTGAAAGTTATCTTCTATATTTTTTGTGTCAGATTTTGATTCTGGTTATTAAAATTGTTGGCTAATATGCTAACAAAAG GATCAAACTTAGATTTCTGACAGGGCTGAGTTTGGAAGAAGCTTGTTCCAGAGGCTGGTAATGTTGGGATACAAGAAGCA TATGCTTAATGTTCAATATAGAATGCATCCATCCATTAGCATGTTCCCAAGTAAGGAGTTTTATAATGGGAAACTCCGTG ATTCTCCCAATGTCAGAGAATTAAGCTATAATAAGCGTTTCCTTGAAGGGAAAATGTATGCTTCATACTCTTTTATAAAC ATATCAAAGGGTAAAGAGCAATCTAATCATGACTTCAGTTTGAAGAATACGGTTGAGGCTGCTGCTATTGCGAAGATTAT TGGAAACCTCAAGAGGGGTAATTTCTCTTTCTCCTTCTCTTGTGTCAGTTAGTGCATGTTGGGAAACTAGTTCGAAAGGC ACAGTGAAGCCAAAATAATGGTGGATGGAAGCAACATCCCTTAGCTTTTGTTTCTGTCCAGTATGATTTTTTTTTCGCCG TGGTTTTCGAATGAGTTTCCTATGTGTTTGTTAATCATGTCCTGCATTGACAGTTCTTGAATGAAGATACGTTCAGGTAT ATACCATGTAAACTATGATCTTTTTCTTGCCAGAATGTGTGAGGACGAGAACAAAACTTAGCATAGGGATCATATCTCCG TACAAGGCTCAAGTTTCTGAAATCCAAGAGAAAGTTAAGCAGCATGTATCGGTTTATGATACCTACTTCTCTGTTAGTGT TCGTTCTGTTGATGGCTTTCAAGGTGGTGAAGAAGATTTAATTATAATTTCGACTGTGAGATCTAATCGGAGTGGAAATG TGGGCTTTCTTTCCAATAGACAAAGAGCAAATGTGGCTATAACAAGGGCTAGGTATGTCGTACATATTATTGTCATGATA TCATGTTGCTTTAGAGGTCTGTGAATATGAACCAGTTGATTGAATACTGATAATCTTTTGTGCAGACATTGCCTTTGGAT ATTAGGAAATGCAGCAACTTTAATCCACAGTGGCTCAGTGTGGAGAAAGTTAGTTCTTGATGCTAAGGAAAGAGGCTGTT ACCATAATGCTGATGAGGACAAGAAGTTGGCTAAGGCTATTGACTATGCCTTGTATGAGATGGAACTACTGGATGGATCT GCATCACCATTTCAGAAACTAAGCCTAAGGGACAAGCCAGAAACAACTGCTAATTTCTCTAGGTAAGTGAAGCCATGACA TGTTTTTTATATATTCATATTAATTTTATAAGCTAGGTCTTGAGTTCGTGTTTTGTGTATGAGCAAAAACCCGTTGGGAG AGAGCTAGCCCTACCAGAGTGTGGATGTTCTCAGCACGAACAGAATTGCCTCCCATAGATAATACATGTATTAGACAAAA AAAAAATTGTAAAAGTATTTTGAGGATGTAAGAAAATTTGCTAAGTATGTATATACAATTATATATATTTAAAAATTACT CTAAAAATTATTTTTAACCGTTGGGTTAGTGGCATTGCTAGTTTCAGAAACTGATATTTCTACAATTGTATTTACAGGAA ACTATGGAATTCAAGGCGATGATAATGAACAAGGATGGCTGATTACTGCGTAGACCCTGGCTGACGCTAATGCTCGAATT TTTTCACCACAACAACAACCAAATCATGTTCACATTGATAATTCTCGAGTTCTAACTCTTGTTTGTTTTTCGATTGTTTC TCGAGTTGAACTATTTGGACATTAAATTATACATATAGAGATGTTCTCTATTTGTTATCAAGTATCGTGCATCATTATTA AATACTTTGAATTCGGTAATGTAGCTTGGTTACTTG
CDS sequence (LotjaGi1g1v0101500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGAATTATCATACCACAAGGGAAAATTTTGTGAACGACTTGATAGATATTGTATTCTCTTGGACTCTTGAGGATGC TCTCACTGAAAATCTCTTCAAATACCAGATACCGAAGATACCAAAAACATTCATGTCAATAAAACATTACATGAATTCAT TCATCCCTGCATTGATTGAAGAAACTCATAGTGAACTGTATTCAGGCTTGATAAGCGTGTCTCAAGCTCCTTTTTGTGAA ATCTCGACAATTGAACCATCCAGGGACTTCAATCCTCCCATGGGCTTGTTCTATAAGATTAAATTGAAGAGCACCACTGA GGATGTCCAAGCTGTAAGAAAATATGTACCTGAGGTTGGAGATATCTTTGCATTCACAACTATTAGACCGAGAAGTGTAG ATGACTTGAACATGCCCGAAAACTACTACCATATCGCTTATGTTGAAAGGAAAAAAGATGAATACACTGATGAGATCTCT ATATTGTCATCCAATGACATGGAGTTGGATGCTAAAACTGACTTCAGTAGTAACAAAGCACAAAAGCTTTATGCTGTCTT TCTTATGAACATGACAACAAATGTTCGGATTTGGAAAGCCTTGCACCATGAGTTGGAGGCTGCAAACATGAACCTTGTTT GGGAAGTGGTGCAAGCTGATGCGAAAAGACAGCAGAGTGGAGAAAACTGTCCCATTTGCTTATCTGGAGAAAATCTCAGT CCAGGCTATTCTCAAGTACAAAACATAATCAGAGCTCAGAATTTAAATGAATCTCAAAAGGAGGCTGTTTTAAGCTGTTT TACTATGAGAAAATGTCATCATAATAGTGACCCCATAAAACTCATATGGGGTCCTCCAGGGACAGGCAAAACAAAAACAG TTGCTTCCTTGTTGTTTTGCCTTCTGAAGTCAAGAATCAGAACACTGACATGTGCTCCAACTAATACTGCAGTGATAGCA GTAGCAACTCGCCTTCACAGCATAGTTAAGGATTTACATGAATATGATACATATGGTCTTGGTGATGTAGTGCTGTTCGG CAATGGTGAAAGATTGAACATAGATAATCATAAGAGTCTTCAGGAAGTGTTTCTGGATCGTAGAGTGAAAGAATTGTTGC CATGTTTTCTTCCATTGACTGGATGGAAACATTACTTGGAATCAATGATCAAGTTACTAAAGGATCCCAAAGAGCAATAT GCTAAATATAATAAGCGCGATGTGAATGATGGTGAGGAGGATCTGATGTCATTAGAAGAATTTGCTAAGAAAAGTTGTCC TAATCTAGAAGCTGTATATAATTCATACAAGAAGCGTGGTAAGAGTCTTGTTCCTATCACATTGACGGAATTTGTGAAAA AGAGATATGACCATATAGTGGAGCAATACCAAATCTATGGAGATGAGAAAAAGTTAAATGCCGGTATGACTATGGAGGAA TTTGTTAGGCAGAGATTCAGTTTCATAGGAGAGAAGCTCAAGATACTCATGCGAACCTTGTACACACACTTACCGACATC TTTCATTCCATTAAAGGTGGTTAAGAAAATGTTTACAGCTCTGGACTTGCTAAAATCTCTTGAAATTTCGTTGCGGCAAA CCAAGTCCATTCAAGCTCTTCATGATTCTGAAGACGGACAAAAGCACTTTAAATGGTTAAGCTCCAACAAAGACATGCTA CTGTGCGCCCTGATTTCACTTTCTATGCGGATTCAGCTTCCCAATATTATAAGCAAATATAGCATATCAGAATTTTGCTT GAGTAATGCATGCCTAGTCTTTAGTACAGCATCAAGTTCTTCTAAATTGTACACAAAAGGAATGACAGAAGTGAAATTCC TAGTTATTGATGAAGCAGCACAGCTAAAAGAATGTGAATCAAACATTCCATTACAGCTACCAGGCCTCCATAGTTGTGTC CTCATAGGTGATGAGAAACAGCTCCCAGCAATGGTCAGAAGCAAGATTTCTGACAGGGCTGAGTTTGGAAGAAGCTTGTT CCAGAGGCTGGTAATGTTGGGATACAAGAAGCATATGCTTAATGTTCAATATAGAATGCATCCATCCATTAGCATGTTCC CAAGTAAGGAGTTTTATAATGGGAAACTCCGTGATTCTCCCAATGTCAGAGAATTAAGCTATAATAAGCGTTTCCTTGAA GGGAAAATGTATGCTTCATACTCTTTTATAAACATATCAAAGGGTAAAGAGCAATCTAATCATGACTTCAGTTTGAAGAA TACGGTTGAGGCTGCTGCTATTGCGAAGATTATTGGAAACCTCAAGAGGGAATGTGTGAGGACGAGAACAAAACTTAGCA TAGGGATCATATCTCCGTACAAGGCTCAAGTTTCTGAAATCCAAGAGAAAGTTAAGCAGCATGTATCGGTTTATGATACC TACTTCTCTGTTAGTGTTCGTTCTGTTGATGGCTTTCAAGGTGGTGAAGAAGATTTAATTATAATTTCGACTGTGAGATC TAATCGGAGTGGAAATGTGGGCTTTCTTTCCAATAGACAAAGAGCAAATGTGGCTATAACAAGGGCTAGACATTGCCTTT GGATATTAGGAAATGCAGCAACTTTAATCCACAGTGGCTCAGTGTGGAGAAAGTTAGTTCTTGATGCTAAGGAAAGAGGC TGTTACCATAATGCTGATGAGGACAAGAAGTTGGCTAAGGCTATTGACTATGCCTTGTATGAGATGGAACTACTGGATGG ATCTGCATCACCATTTCAGAAACTAAGCCTAAGGGACAAGCCAGAAACAACTGCTAATTTCTCTAGGAAACTATGGAATT CAAGGCGATGA
Protein sequence (LotjaGi1g1v0101500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQNYHTTRENFVNDLIDIVFSWTLEDALTENLFKYQIPKIPKTFMSIKHYMNSFIPALIEETHSELYSGLISVSQAPFCE ISTIEPSRDFNPPMGLFYKIKLKSTTEDVQAVRKYVPEVGDIFAFTTIRPRSVDDLNMPENYYHIAYVERKKDEYTDEIS ILSSNDMELDAKTDFSSNKAQKLYAVFLMNMTTNVRIWKALHHELEAANMNLVWEVVQADAKRQQSGENCPICLSGENLS PGYSQVQNIIRAQNLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFCLLKSRIRTLTCAPTNTAVIA VATRLHSIVKDLHEYDTYGLGDVVLFGNGERLNIDNHKSLQEVFLDRRVKELLPCFLPLTGWKHYLESMIKLLKDPKEQY AKYNKRDVNDGEEDLMSLEEFAKKSCPNLEAVYNSYKKRGKSLVPITLTEFVKKRYDHIVEQYQIYGDEKKLNAGMTMEE FVRQRFSFIGEKLKILMRTLYTHLPTSFIPLKVVKKMFTALDLLKSLEISLRQTKSIQALHDSEDGQKHFKWLSSNKDML LCALISLSMRIQLPNIISKYSISEFCLSNACLVFSTASSSSKLYTKGMTEVKFLVIDEAAQLKECESNIPLQLPGLHSCV LIGDEKQLPAMVRSKISDRAEFGRSLFQRLVMLGYKKHMLNVQYRMHPSISMFPSKEFYNGKLRDSPNVRELSYNKRFLE GKMYASYSFINISKGKEQSNHDFSLKNTVEAAAIAKIIGNLKRECVRTRTKLSIGIISPYKAQVSEIQEKVKQHVSVYDT YFSVSVRSVDGFQGGEEDLIIISTVRSNRSGNVGFLSNRQRANVAITRARHCLWILGNAATLIHSGSVWRKLVLDAKERG CYHNADEDKKLAKAIDYALYEMELLDGSASPFQKLSLRDKPETTANFSRKLWNSRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 916 | 911 | 0.0 | – | |
| PANTHER | 6 | 916 | 911 | 0.0 | – | |
| CDD | 254 | 370 | 117 | 7.50094E-16 | – | |
| SUPERFAMILY | 254 | 868 | 615 | 5.58E-55 | ||
| Pfam | 254 | 655 | 402 | 2.7E-33 | ||
| CDD | 587 | 685 | 99 | 1.17195E-26 | – | |
| Pfam | 663 | 859 | 197 | 8.0E-60 | ||
| Gene3D | 684 | 898 | 215 | 6.6E-59 | – | |
| CDD | 686 | 877 | 192 | 3.2291E-56 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0101500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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