Domain Predictions — View

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cd18042

Source: CDD

Description

DEXXQc_SETX

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 17

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0101200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative; TAIR: AT1G65810.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|B6SFA4\|MAA3_ARATH Probable helicase MAGATAMA 3; TrEMBL-Plants: tr\|G7KFQ2\|G7KFQ2_MEDTR p-loop nucleoside triphosphate hydrolase superfamily protein; Found in the gene: LotjaGi1g1v0101200	Domains G3DSA:3.40.50.300 IPR027417 IPR041677 IPR041679 PF13086 PF13087 PTHR10887 PTHR10887:SF469 SSF52540 cd18042 cd18808 mobidb-lite	12
LotjaGi1g1v0101400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein; TAIR: AT1G65810.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|B6SFA4\|MAA3_ARATH Probable helicase MAGATAMA 3; TrEMBL-Plants: tr\|G7KFP0\|G7KFP0_MEDTR p-loop nucleoside triphosphate hydrolase superfamily protein; Found in the gene: LotjaGi1g1v0101400_LC	Domains G3DSA:3.40.50.300 IPR027417 IPR041677 IPR041679 PF13086 PF13087 PTHR10887 PTHR10887:SF469 SSF52540 cd18042	10
LotjaGi1g1v0101500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative; TAIR: AT1G65810.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|O94387\|YGSA_SCHPO Uncharacterized ATP-dependent helicase C29A10.10c; TrEMBL-Plants: tr\|G7KFN9\|G7KFN9_MEDTR p-loop nucleoside triphosphate hydrolase superfamily protein; Found in the gene: LotjaGi1g1v0101500	Domains G3DSA:3.40.50.300 IPR027417 IPR041677 IPR041679 PF13086 PF13087 PTHR10887 PTHR10887:SF469 SSF52540 cd18042 cd18044 cd18808	12
LotjaGi1g1v0101500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative; TAIR: AT1G65810.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|O94387\|YGSA_SCHPO Uncharacterized ATP-dependent helicase C29A10.10c; TrEMBL-Plants: tr\|G7KFN9\|G7KFN9_MEDTR p-loop nucleoside triphosphate hydrolase superfamily protein; Found in the gene: LotjaGi1g1v0101500	Domains G3DSA:3.40.50.300 IPR027417 IPR041677 IPR041679 PF13086 PF13087 PTHR10887 PTHR10887:SF469 SSF52540 cd18042 cd18044 cd18808	12
LotjaGi1g1v0101500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative; TAIR: AT1G65810.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|O94387\|YGSA_SCHPO Uncharacterized ATP-dependent helicase C29A10.10c; TrEMBL-Plants: tr\|G7KFN9\|G7KFN9_MEDTR p-loop nucleoside triphosphate hydrolase superfamily protein; Found in the gene: LotjaGi1g1v0101500	Domains G3DSA:3.40.50.300 IPR027417 IPR041677 IPR041679 PF13086 PF13087 PTHR10887 PTHR10887:SF469 SSF52540 cd18042 cd18044 cd18808	12
LotjaGi3g1v0000400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative; TAIR: AT1G16800.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|Q00416\|SEN1_YEAST Helicase SEN1; TrEMBL-Plants: tr\|A0A0R0FU35\|A0A0R0FU35_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0000400	Domains Coil G3DSA:3.40.50.300 IPR027417 IPR041677 IPR041679 PF13086 PF13087 PTHR10887 PTHR10887:SF382 SSF52540 cd18042 cd18808 mobidb-lite	13
LotjaGi3g1v0000400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative; TAIR: AT1G16800.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|Q00416\|SEN1_YEAST Helicase SEN1; TrEMBL-Plants: tr\|A0A0R0FU35\|A0A0R0FU35_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0000400	Domains Coil G3DSA:3.40.50.300 IPR027417 IPR041677 IPR041679 PF13086 PF13087 PTHR10887 PTHR10887:SF382 SSF52540 cd18042 cd18808 mobidb-lite	13
LotjaGi3g1v0309700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative; TAIR: AT1G65810.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|B6SFA4\|MAA3_ARATH Probable helicase MAGATAMA 3; TrEMBL-Plants: tr\|G7KFP7\|G7KFP7_MEDTR p-loop nucleoside triphosphate hydrolase superfamily protein; Found in the gene: LotjaGi3g1v0309700_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.300 IPR027417 IPR041677 IPR041679 NON_CYTOPLASMIC_DOMAIN PF13086 PF13087 PTHR10887 PTHR10887:SF469 SSF52540 TRANSMEMBRANE cd18042 cd18808	14
LotjaGi3g1v0415800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein; TAIR: AT4G30100.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|O94387\|YGSA_SCHPO Uncharacterized ATP-dependent helicase C29A10.10c; TrEMBL-Plants: tr\|V7AP63\|V7AP63_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0415800	Domains G3DSA:3.40.50.300 IPR027417 IPR041677 IPR041679 PF13086 PF13087 PTHR10887 PTHR10887:SF455 SSF52540 cd18042 cd18808 mobidb-lite	12
LotjaGi3g1v0415800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein; TAIR: AT4G30100.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|O94387\|YGSA_SCHPO Uncharacterized ATP-dependent helicase C29A10.10c; TrEMBL-Plants: tr\|V7AP63\|V7AP63_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0415800	Domains G3DSA:3.40.50.300 IPR027417 IPR041677 IPR041679 PF13086 PF13087 PTHR10887 PTHR10887:SF455 SSF52540 cd18042 cd18808 mobidb-lite	12
LotjaGi4g1v0018100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative; TAIR: AT1G65810.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|O15050\|TRNK1_HUMAN TPR and ankyrin repeat-containing protein 1; TrEMBL-Plants: tr\|A0A0B2R102\|A0A0B2R102_GLYSO TPR and ankyrin repeat-containing protein 1; Found in the gene: LotjaGi4g1v0018100	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.40.50.300 IPR014016 IPR027417 IPR034739 IPR039904 IPR041677 IPR041679 NON_CYTOPLASMIC_DOMAIN PF00580 PF13086 PF13087 PS51198 PTHR21529 SSF52540 TRANSMEMBRANE cd17934 cd18042 cd18808 mobidb-lite	21
LotjaGi4g1v0029400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein; TAIR: AT4G15570.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|B6SFA4\|MAA3_ARATH Probable helicase MAGATAMA 3; TrEMBL-Plants: tr\|V7B556\|V7B556_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0029400	Domains G3DSA:3.40.50.300 IPR014001 IPR027417 IPR041677 IPR041679 PF13086 PF13087 PTHR10887 PTHR10887:SF382 SM00487 SSF52540 cd18042 cd18808 mobidb-lite	14
LotjaGi4g1v0029400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein; TAIR: AT4G15570.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|B6SFA4\|MAA3_ARATH Probable helicase MAGATAMA 3; TrEMBL-Plants: tr\|V7B556\|V7B556_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0029400	Domains G3DSA:3.40.50.300 IPR014001 IPR027417 IPR041677 IPR041679 PF13086 PF13087 PTHR10887 PTHR10887:SF382 SM00487 SSF52540 cd18042 cd18808 mobidb-lite	14
LotjaGi5g1v0020800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative; TAIR: AT1G65780.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|Q9HEH1\|RENT1_NEUCR Regulator of nonsense transcripts 1 homolog; TrEMBL-Plants: tr\|A0A0B2R102\|A0A0B2R102_GLYSO TPR and ankyrin repeat-containing protein 1; Found in the gene: LotjaGi5g1v0020800	Domains Coil G3DSA:3.40.50.300 IPR027417 IPR041677 PF13086 PTHR10887 PTHR10887:SF465 SSF52540 cd18042	9
LotjaGi5g1v0209800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative; TAIR: AT1G65780.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|Q8BV79\|TRNK1_MOUSE TPR and ankyrin repeat-containing protein 1; TrEMBL-Plants: tr\|A0A0B2R102\|A0A0B2R102_GLYSO TPR and ankyrin repeat-containing protein 1; Found in the gene: LotjaGi5g1v0209800	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.40.50.300 IPR014016 IPR027417 IPR034739 IPR039904 IPR041677 IPR041679 NON_CYTOPLASMIC_DOMAIN PF00580 PF13086 PF13087 PS51198 PTHR21529 SSF52540 TRANSMEMBRANE cd17934 cd18042 cd18807 cd18808 mobidb-lite	22
LotjaGi5g1v0209800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative; TAIR: AT1G65780.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|Q8BV79\|TRNK1_MOUSE TPR and ankyrin repeat-containing protein 1; TrEMBL-Plants: tr\|A0A0B2R102\|A0A0B2R102_GLYSO TPR and ankyrin repeat-containing protein 1; Found in the gene: LotjaGi5g1v0209800	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.40.50.300 IPR014016 IPR027417 IPR034739 IPR039904 IPR041677 IPR041679 NON_CYTOPLASMIC_DOMAIN PF00580 PF13086 PF13087 PS51198 PTHR21529 SSF52540 TRANSMEMBRANE cd17934 cd18042 cd18807 cd18808 mobidb-lite	22
LotjaGi6g1v0050000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative; TAIR: AT1G65780.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|B6SFA4\|MAA3_ARATH Probable helicase MAGATAMA 3; TrEMBL-Plants: tr\|G7J7W5\|G7J7W5_MEDTR p-loop nucleoside triphosphate hydrolase superfamily protein; Found in the gene: LotjaGi6g1v0050000	Domains Coil G3DSA:3.40.50.300 IPR027417 IPR041677 IPR041679 PF13086 PF13087 PTHR10887 PTHR10887:SF464 SSF52540 cd18042 cd18044 cd18808	13

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd18808	CDD	1	5.88