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LotjaGi1g1v0117800.1

Overview

Field Value
Gene ID LotjaGi1g1v0117800
Transcript ID LotjaGi1g1v0117800.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Potassium transporter; TAIR: AT2G30070.1 potassium transporter 1; Swiss-Prot: sp|O22397|POT1_ARATH Potassium transporter 1; TrEMBL-Plants: tr|G7K729|G7K729_MEDTR Potassium transporter; Found in the gene: LotjaGi1g1v0117800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:18506657..18512317) extracted from Lotus japonicus Gifu genome v1.2.

CACCACTTGCCTTTCTACTACTTCAGTTCTTCTACTTTTCCATCCCTGTATTCTCTGCATTCTCCCCCTATATATTCTCT GTCTCATCATTTTCTTAATAACTTACCTCATCCTTGATCCTGCTAAGGCCTCACTTCTTAGTTCTTACTTCTTACCTTTC AGCCATGAACCCATCTGAGCAATATGTTGAACATGGAATATCTCAGCAGGTACCCTTTTCTTTTTTTCTTTTAGATATCC AATTATAGCCTAAAGCCTAAAAACTTGCATTGTCTCTGTCAACTTTTTCACCTTTTTTTTCAGTTATCCATTTCTTCACA GTCATGGAATGTTTTATTGTTTGCTCATGTTCTCTGAAATGTTTATTTCATTTCTTCAAATTTCATGTTCTATTAAGTTT GTGGATTACATTAGCACAGTGTTGGTTTTAACAGATTTTAATTAAATTCTAGCATGTCTTCTTTTGAATTTGTAAAAGAT AATGAACAGGAGTCTGTTCTGACATATGGTGTTGGTACATAGAAGCTAATAGAATGCTAACTGCAGAAAGATGAAATTTT GTAGAAATTTTATTTGCTTTGTGTCATGGTGAAAGCTTAATGTTTATATTATGAACTAACTTGTAATGCTTGGGTTGTTT CTGTATCAGAATTTAAAGAGGAAATCCTGTGCCACTGTTCTAACTCTGGCTTACCAAAGTCTGGGAGTGGTTTATGGTGA TCTCAGCACTTCCCCTCTTTATGTTTACAAGACCACATTCTCAGGGAAATTGAGACTCAAAGAAGATGATGAGGAAATTT TTGGGGTGCTTTCATTTATCTTCTGGACATTTACCATTATTGCTCTCTTCAAATATGTTTTCATTGTGATGTCTGCTGAT GACAATGGGGAAGGTAAAATCTTGAATCGTGGTCCTTGTTCTTTAAGTAGCTTCTGGATTTCATAATTGATTCTGAGAAA AGAGAAGCTAATCCAAACAACCTTGGAATATTCTGTCATTTGTTCTTTTTAACTTTAAATAATTATGAGCATAGTTTTCC TCCTTTATTCTTAGATTTGTGAGATAAAATCAGCTCTAATATGATTGATCAATTAGCAGAATAATATTTCAAAATTAATT TACTTGTAACTAGCGTTCTTTGTTTTTACAATAAAAAGTTCCTGTCAATTTACTTCGACTTTGCATGTTGAAAAGTTATC TATGTGAGCCAGTTTTGCCTCTCAATGGCCCAGAACAAGAAAAATCTCTAGCTCAATGAGCATCTAAGAATTTCTTGTGT TCCTGAGGATATTTAGTGCATATCTGGGAACCCTTTTGTGATGGACTGATGCCAAAATTAATTCTCGGGAAGAAGCTTCT GAGAGTAGTTTTTGATTTCATAATTGATTCTGATGAAAGAGAAGTTGATTCAAACATGCTACTTCTCAATTGTTCACTTA TTTGTGCAGGAGGCACCTTTGCATTGTACTCACTTCTCTGCCGACACGCGAGGCTAAGCATTCTACCTAATCAGCAACCA ACAGATGCGCAGTTGTCTTCTTATGCAACAGAAAATTCTGAAGACACATGGCAGTCTTCTTTTCTAAAGATGTTCTTCGA AAAGCACCCGAGGTTCCAGAAAGGACTTCTGATCTTTGTTCTGTTAGGGACCTGTATGGCAATTGGTGATGGTGTGATTA CTCCTGCAATATCAGGTAGTTGATCAGGAGCAGCCCTTGAGCTTCTTAATGATGTTTACTTCATGACTCCTGTAAGCTAT CCTTTTATCTTTAGCCGTCTCGTGTTACTCGTACACGAAAAAAGTGAGCCTAGTATGTTCTAAGAACGCGTTCAGTGATG AAATTCTAAGGTTAATGGTTAATGTATATATTGAAAGGAAAGGGAATGCTGAGAATAATAAAATTGTATTGATAATGTGT GATTACAAAGGATAATACTAATCCTTATTAGTTTCTCCTATATTGCGTATGTGATCCATCATTGACTTTGTTATATATAC ATAAATGCAGTTCTTAGATGGAAGTTTTTGATGGTTACTAATTGCTAGAATTGATTATTTCTTGTAATCTCATCAGATAA AAACACATTTCAGACTAAGATTTCTACCTTTTACAGAAAATATACTAATTCTGGACATGCTTCTCAAGCATCAATAAAAC AGATTAAATATTCCCATTGCTTAATGTAGTTGTGCATTTTATGGTGTTATGAATGATGTAATAATGTCTTGAGTACTTAT GTGCAAGGAAAGGGAAAATCAATAAATGAAAGGGCATTGATGGTTATAATTATGAAATTTGGTGGAAAAGGAAAGTATTA TTCTTCTTTCAAGGAATATTGTTTTGTGAAACATGTTTTGTAGTGGGACAAGGCTTTTGTTGTTGTTTCTGTTGTACTTT GACATTTATGAGTTAGTTCAGGAGTTAATATTTATATGTCTCCTTTCAGTTCTTTCCGCGGTTTCAGGAGTTCAAGTTAA AATCAATCAACTCCATGACAGTAAGCCTACCAAAAAATTTCAATTACCTTTAAATCTATTCATAGTTTTTAAAAATCCAC ATGTTTTTTTGCAGATTATGTTGTTATAATCTCATGTATTATTTTAGTGGGCCTTTTCTCCATTCAGCATCATGGGACAC ACAGAGTTGCCTTCATGTTTGCCCCAGTTGTTGCAGCATGGCTTTTGTGTATCAGTGGTATTGGTATATACAACATATTC CACTGGAATCCGCAAATATACCGAGCACTTTCTCCGGTCTATATGTTCAGATTCCTCAAAGCCACTGGTACTGAAGGATG GATGTCATTAAGTGGAGTGGTGCTTTCGATCACAGGTAATTGCAATAGTTGATTTTATTATCTTCTGAAGAGTTGTGAAA CTAATTTTCATGTGTTTCAGGGGTGGAGACAATGTATGCTGACTTGGGTCATTTTTCTGCTCTCTCAATAAAGGTAAGTT CAGATTATGATTGGTCCTAGGACTTCTAATCTTCTTAACATGGTTTTTCATCATTATAACATGTTTGGGTGAAATTCCTA GAAGTACTTGAGGCTGACAAAATCACATTGAGGAAAAAGCAAAAAGACCAAGCTTTTGAGTTAACTTGAAAGTGATTTTA ACTCTTCTCACAAGACATAAAAATAGCTTTTATAGTAAATGCATCCAAACATAAATTACTCAACTCACATTTACCAAAAT CAATTTTGTCAAACTCAATTCTCTGCAAGATTACTTCTCCCGATGCTAAACCTAACATGCACTTAGTCTACCATACAAAA ATGAATTCTGATTTTAACATTTGCACTTAAATCTCAGATAGCTTTCACATGTCTTGTATATCCCTGCCTGATTTTGGCAT ACATGGGAGAGGCTGCATTTCTCTCTAAGAACCACTCTGACATTCAAAGAAGTTTCTACAAAGCCATACCAGGCAAGAAA CCATTTAAACAACTGCAATTGTCAATGTTATTTATGGTCTCTCAAGTGTAACTGTGCCAATGTTTTTCTGCAGAAACTGT ATTTTGGCCAGTTTTCATAGTGGCCACTCTTGCTGCTGTTATAGGAAGTCAAGCAGTGATTTCTGCTACTTTTTCCATCA TAAGCCAGTGCTGTGCATTGAATTGCTTCCCTCGCGTTAAGATTGTTCATACTTCAAGCAGAATTTATGGGCAGATTTAT GTCCCAGAAATTAATTGGTTATTAATGTGCCTTTGTTTAGCTGTCACAATTGGCCTAAGGGATACAAACATGATGGGTCA TGCATATGGTACACTTCTTTAAAAAGAACTTCTTTTCCACTGTGGTTACTTATGATATTTGAAGCATTGACAAGTAAACT TAGGTCCGTTTGGAAGAGTTAATTTGAGTTTGGCTTAAAACATAAGTGCTTATACAAGTGTCTGCTTATAGTTTATATTC TACCTATAAGCAGTTTTTAGCTTATTTTCATAAGCTACTCAAATTAGCTTATGAATAAGCGCTTATACGTACTTATAACC TGTTTTGAACTTACTTTGATAAGTTTATCAAATTAGCTTATTGGCGTAAGCCCTTATTGGCATAAGCGCTAAATTAATAG GGTGTTTGAATCACCGTTGTCATAATTGATTTTGTCAAAATTGATTATAGTAAATGTGAGTTGAAAGTAAAGTGATTTAT GTTCGGATACAATTATGAAAAAAAGTGTTTTTGTAGGGCAATTTTATGAATTCTAATTGTAAAATCTCCTAATTGATTTA TGTTCAACACTGAAACTACTCTTTCTAGCTTCTAGGAGAATTGATTTTGGGACTGATATCAATTTTCCAAAATGACTCAC AAACATTTATATTGACAACCAAAATTGACTATTCTCTATCAGAATTGATTCTGAGTTTCTTCAATGGGAAACCAAACACA CTCTGACCTGTTTACCTAGACACACTCTTAAACATTTTTTTTTGGGTTTGCAGGGCTGGCTATCACAACTGTTATGTTTG TGACAACATGCTTGATGACACTAGTGATTGTGATTGTGTGGAAGCAAGGGATAATAAAAGCCCTTGCATGTTTGCTCTTG TTTGGATCAATTGAACTTCTCTACATCTCAGCTTCTATTTGCAAAGTTCCTGAAGGAGGGTGGATCCCACTAGTGCTATC TTTCATTTTCATGGGGATAATGTTCACTTGGAACTATGGAACAATGAAGAAACACCAATTTGATGTGGAGAACAAGGTTT CAATGAGCAAGATACTATCCTTGGGACCTTGCTTAGGCATGGTCAGGGTCCCTGGAATAGGACTTGTCTTCAATAACTTG ACTTCAGGAATCCCTGCCATTTTTGGCCATTTTGTTACAAATTTGCCAGCATTCCATCAGGTTTTGGTGTTTGTGTGTGC CAAATCTATTCAAGTCCCTCATGTCGGTGAAAATGAAAGGCTGGTCATTAGTAGAATTGGTCCAAAAGAGTACCACATGT TTCGTTGCATAGTCAGATATGGCTACAAGGATATGCAACAAGAGAATTACAATTTTGAGAACAACATGGTATCTGCGATA ATACAATTTGTAGAAAAAGAAGAGGACATTCGAGAACAAACACATGAATTGTCCATGGATGATGCAATGGAAGACCTTGG TGCTTCATATTCACAACACACTTTGAATAGGTCATGTTGTGAAAAGAAACATGTCCAATTTTCAAGTGTTTCTGGCAATC TTGAAGGTCCTCCCCATAAAGATGAGTCTTTACAGATTTTACAAGCTAAAGAGTCTGGTGTTACATACATACTTGGCCAT TCCTATGCAGAGGCAAAAAGACCATCCTCCATGTTGAAGAAATTTGCAATAGATGTTGTTTTTGCTTTTCTAAGCAAGAA TTGCAGAGACCCTGATATTGTTCTGGATGTAGCTCATACTTCCTTGCTAGAAGTTGGTATGGTTTACCACGTCTAACTCT AACCTTATACATAGGTATCCACATAGAACAGAATACTAGAATAGTCAGTTTGTAAATGTTGGTCTAAGACTAGAACATTA ACAATGACTTCTACACGCCAATGATCAAGATGAAATGGTTGTATATTTCCCATCATTGATCTCTAGCTAGGTGTCCATAC CTAAGAATGTCATTCAAAAATTTGTTTCATACAAGAAAAGTAGAATATACACCAAATAAAG 

CDS sequence (LotjaGi1g1v0117800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAACCCATCTGAGCAATATGTTGAACATGGAATATCTCAGCAGAATTTAAAGAGGAAATCCTGTGCCACTGTTCTAAC TCTGGCTTACCAAAGTCTGGGAGTGGTTTATGGTGATCTCAGCACTTCCCCTCTTTATGTTTACAAGACCACATTCTCAG GGAAATTGAGACTCAAAGAAGATGATGAGGAAATTTTTGGGGTGCTTTCATTTATCTTCTGGACATTTACCATTATTGCT CTCTTCAAATATGTTTTCATTGTGATGTCTGCTGATGACAATGGGGAAGGAGGCACCTTTGCATTGTACTCACTTCTCTG CCGACACGCGAGGCTAAGCATTCTACCTAATCAGCAACCAACAGATGCGCAGTTGTCTTCTTATGCAACAGAAAATTCTG AAGACACATGGCAGTCTTCTTTTCTAAAGATGTTCTTCGAAAAGCACCCGAGGTTCCAGAAAGGACTTCTGATCTTTGTT CTGTTAGGGACCTGTATGGCAATTGGTGATGGTGTGATTACTCCTGCAATATCAGTTCTTTCCGCGGTTTCAGGAGTTCA AGTTAAAATCAATCAACTCCATGACAATTATGTTGTTATAATCTCATGTATTATTTTAGTGGGCCTTTTCTCCATTCAGC ATCATGGGACACACAGAGTTGCCTTCATGTTTGCCCCAGTTGTTGCAGCATGGCTTTTGTGTATCAGTGGTATTGGTATA TACAACATATTCCACTGGAATCCGCAAATATACCGAGCACTTTCTCCGGTCTATATGTTCAGATTCCTCAAAGCCACTGG TACTGAAGGATGGATGTCATTAAGTGGAGTGGTGCTTTCGATCACAGGGGTGGAGACAATGTATGCTGACTTGGGTCATT TTTCTGCTCTCTCAATAAAGATAGCTTTCACATGTCTTGTATATCCCTGCCTGATTTTGGCATACATGGGAGAGGCTGCA TTTCTCTCTAAGAACCACTCTGACATTCAAAGAAGTTTCTACAAAGCCATACCAGAAACTGTATTTTGGCCAGTTTTCAT AGTGGCCACTCTTGCTGCTGTTATAGGAAGTCAAGCAGTGATTTCTGCTACTTTTTCCATCATAAGCCAGTGCTGTGCAT TGAATTGCTTCCCTCGCGTTAAGATTGTTCATACTTCAAGCAGAATTTATGGGCAGATTTATGTCCCAGAAATTAATTGG TTATTAATGTGCCTTTGTTTAGCTGTCACAATTGGCCTAAGGGATACAAACATGATGGGTCATGCATATGGGCTGGCTAT CACAACTGTTATGTTTGTGACAACATGCTTGATGACACTAGTGATTGTGATTGTGTGGAAGCAAGGGATAATAAAAGCCC TTGCATGTTTGCTCTTGTTTGGATCAATTGAACTTCTCTACATCTCAGCTTCTATTTGCAAAGTTCCTGAAGGAGGGTGG ATCCCACTAGTGCTATCTTTCATTTTCATGGGGATAATGTTCACTTGGAACTATGGAACAATGAAGAAACACCAATTTGA TGTGGAGAACAAGGTTTCAATGAGCAAGATACTATCCTTGGGACCTTGCTTAGGCATGGTCAGGGTCCCTGGAATAGGAC TTGTCTTCAATAACTTGACTTCAGGAATCCCTGCCATTTTTGGCCATTTTGTTACAAATTTGCCAGCATTCCATCAGGTT TTGGTGTTTGTGTGTGCCAAATCTATTCAAGTCCCTCATGTCGGTGAAAATGAAAGGCTGGTCATTAGTAGAATTGGTCC AAAAGAGTACCACATGTTTCGTTGCATAGTCAGATATGGCTACAAGGATATGCAACAAGAGAATTACAATTTTGAGAACA ACATGGTATCTGCGATAATACAATTTGTAGAAAAAGAAGAGGACATTCGAGAACAAACACATGAATTGTCCATGGATGAT GCAATGGAAGACCTTGGTGCTTCATATTCACAACACACTTTGAATAGGTCATGTTGTGAAAAGAAACATGTCCAATTTTC AAGTGTTTCTGGCAATCTTGAAGGTCCTCCCCATAAAGATGAGTCTTTACAGATTTTACAAGCTAAAGAGTCTGGTGTTA CATACATACTTGGCCATTCCTATGCAGAGGCAAAAAGACCATCCTCCATGTTGAAGAAATTTGCAATAGATGTTGTTTTT GCTTTTCTAAGCAAGAATTGCAGAGACCCTGATATTGTTCTGGATGTAGCTCATACTTCCTTGCTAGAAGTTGGTATGGT TTACCACGTCTAA 

Protein sequence (LotjaGi1g1v0117800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MNPSEQYVEHGISQQNLKRKSCATVLTLAYQSLGVVYGDLSTSPLYVYKTTFSGKLRLKEDDEEIFGVLSFIFWTFTIIA LFKYVFIVMSADDNGEGGTFALYSLLCRHARLSILPNQQPTDAQLSSYATENSEDTWQSSFLKMFFEKHPRFQKGLLIFV LLGTCMAIGDGVITPAISVLSAVSGVQVKINQLHDNYVVIISCIILVGLFSIQHHGTHRVAFMFAPVVAAWLLCISGIGI YNIFHWNPQIYRALSPVYMFRFLKATGTEGWMSLSGVVLSITGVETMYADLGHFSALSIKIAFTCLVYPCLILAYMGEAA FLSKNHSDIQRSFYKAIPETVFWPVFIVATLAAVIGSQAVISATFSIISQCCALNCFPRVKIVHTSSRIYGQIYVPEINW LLMCLCLAVTIGLRDTNMMGHAYGLAITTVMFVTTCLMTLVIVIVWKQGIIKALACLLLFGSIELLYISASICKVPEGGW IPLVLSFIFMGIMFTWNYGTMKKHQFDVENKVSMSKILSLGPCLGMVRVPGIGLVFNNLTSGIPAIFGHFVTNLPAFHQV LVFVCAKSIQVPHVGENERLVISRIGPKEYHMFRCIVRYGYKDMQQENYNFENNMVSAIIQFVEKEEDIREQTHELSMDD AMEDLGASYSQHTLNRSCCEKKHVQFSSVSGNLEGPPHKDESLQILQAKESGVTYILGHSYAEAKRPSSMLKKFAIDVVF AFLSKNCRDPDIVLDVAHTSLLEVGMVYHV 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 64 64 -
PANTHER 19 750 732 0.0
PANTHER 19 750 732 0.0
TIGRFAM 28 750 723 3.0E-283
Pfam 30 603 574 2.8E-188
Phobius 65 86 22 -
TMHMM 65 87 23 -
Phobius 87 155 69 -
Phobius 156 177 22 -
TMHMM 158 180 23 -
Phobius 178 196 19 -
TMHMM 193 212 20 -
Phobius 197 213 17 -
Phobius 214 219 6 -
Phobius 220 244 25 -
TMHMM 222 244 23 -
Phobius 245 269 25 -
Phobius 270 289 20 -
Phobius 290 300 11 -
TMHMM 294 316 23 -
Phobius 301 321 21 -
Phobius 322 340 19 -
Phobius 341 368 28 -
TMHMM 347 369 23 -
Phobius 369 388 20 -
Phobius 389 411 23 -
TMHMM 390 412 23 -
Phobius 412 422 11 -
TMHMM 422 444 23 -
Phobius 423 446 24 -
Phobius 447 452 6 -
TMHMM 449 468 20 -
Phobius 453 472 20 -
Phobius 473 477 5 -
Phobius 478 496 19 -
TMHMM 478 500 23 -
Phobius 497 516 20 -
Phobius 517 536 20 -
Phobius 537 750 214 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Potassium ion transmembrane transporter activity Enables the transfer of potassium ions (K+) from one side of a membrane to the other.
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Biological process Potassium ion transmembrane transport A process in which a potassium ion is transported from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0117800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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