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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR30540
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We have found 81 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 0.034s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0043739.1
n.a. PREDICTED: potassium transporter 8-like [Glycine max] gi|356573392|ref|XP_003554845.1| chr0 14367392 14374242 +
1 domain prediction
 –
Lj0g3v0043749.1
n.a. PREDICTED: potassium transporter 8-like isoform X1 [Cicer arietinum] gi|502090667|ref|XP_004489302.1| chr0 14368825 14375250 +
1 domain prediction
 –
Lj0g3v0046459.1
n.a. K+ uptake transporter 3 isoform 3 [Theobroma cacao] gi|508711094|gb|EOY02991.1| chr0 15395226 15396107 -
1 domain prediction
 –
Lj0g3v0046479.1
n.a. PREDICTED: potassium transporter 4-like [Glycine max] gi|356561102|ref|XP_003548824.1| chr0 15407687 15411294 +
1 domain prediction
 –
Lj0g3v0095719.1
n.a. K+ uptake transporter 3 isoform 3 [Theobroma cacao] gi|508711094|gb|EOY02991.1| chr0 40301297 40304012 -
1 domain prediction
 –
Lj0g3v0180899.1
n.a. K+ uptake transporter 3 isoform 3 [Theobroma cacao] gi|508711094|gb|EOY02991.1| chr0 88113161 88115267 +
1 domain prediction
 –
Lj0g3v0286209.1
n.a. PREDICTED: potassium transporter 5-like [Glycine max] gi|356519944|ref|XP_003528628.1| chr0 148683211 148686697 +
1 domain prediction
 –
Lj0g3v0299419.1
n.a. PREDICTED: potassium transporter 7-like [Glycine max] gi|356558670|ref|XP_003547626.1| chr0 155582237 155585580 -
1 domain prediction
 –
Lj0g3v0343979.1
n.a. Potassium transporter family protein isoform 1 [Theobroma cacao] gi|508708499|gb|EOY00396.1| chr0 180381062 180387570 +
1 domain prediction
 –
Lj0g3v0348369.1
n.a. PREDICTED: potassium transporter 5-like [Glycine max] gi|356571287|ref|XP_003553810.1| chr0 182837221 182841990 +
1 domain prediction
 –
Lj0g3v0348379.1
n.a. PREDICTED: potassium transporter 5-like [Glycine max] gi|356519944|ref|XP_003528628.1| chr0 182842180 182842325 +
1 domain prediction
 –
Lj0g3v0348389.1
n.a. PREDICTED: potassium transporter 5-like [Cicer arietinum] gi|502152526|ref|XP_004508966.1| chr0 182842373 182843337 +
1 domain prediction
 –
Lj0g3v0348869.1
n.a. KUP-related potassium transporter [Lotus japonicus] gi|38194466|gb|AAR13240.1| chr0 183134150 183138548 +
1 domain prediction
 –
Lj1g3v0695090.1
n.a. PREDICTED: potassium transporter 7-like [Glycine max] gi|356524834|ref|XP_003531033.1| chr1 8990449 8993844 +
1 domain prediction
 –
Lj1g3v0695100.1
n.a. PREDICTED: potassium transporter 7-like [Glycine max] gi|356512055|ref|XP_003524736.1| chr1 8993838 8996527 +
1 domain prediction
 –
Lj1g3v1180840.1
n.a. PREDICTED: potassium transporter 2-like isoform X1 [Cicer arietinum] gi|502136792|ref|XP_004502835.1| chr1 14327092 14331421 -
1 domain prediction
 –
Lj1g3v3871730.1
n.a. PREDICTED: potassium transporter 1-like [Cicer arietinum] gi|502096083|ref|XP_004490620.1| chr1 44457556 44463263 +
1 domain prediction
 –
Lj1g3v3871730.2
n.a. PREDICTED: potassium transporter 1-like [Cicer arietinum] gi|502096083|ref|XP_004490620.1| chr1 44457556 44461160 +
1 domain prediction
 –
Lj2g3v0276740.1
n.a. PREDICTED: potassium transporter 7-like [Glycine max] gi|356558670|ref|XP_003547626.1| chr2 4735295 4738661 -
1 domain prediction
 –
Lj2g3v0658190.1
n.a. PREDICTED: potassium transporter 5-like [Glycine max] gi|356519944|ref|XP_003528628.1| chr2 10539656 10545458 -
1 domain prediction
 –
Lj2g3v1015600.1
n.a. PREDICTED: potassium transporter 8-like isoform X1 [Cicer arietinum] gi|502090667|ref|XP_004489302.1| chr2 15687125 15693404 +
1 domain prediction
 –
Lj2g3v1390580.1
n.a. PREDICTED: potassium transporter 6-like [Glycine max] gi|356497841|ref|XP_003517765.1| chr2 22040550 22045273 -
1 domain prediction
 –
Lj4g3v0153970.1
n.a. KUP-related potassium transporter [Lotus japonicus] gi|38194466|gb|AAR13240.1| chr4 1878521 1882974 -
1 domain prediction
 –
Lj4g3v0244030.1
n.a. PREDICTED: potassium transporter 11-like [Glycine max] gi|356510798|ref|XP_003524121.1| chr4 2901060 2907737 +
1 domain prediction
 –
Lj4g3v0244030.2
n.a. PREDICTED: potassium transporter 11-like [Glycine max] gi|356528128|ref|XP_003532657.1| chr4 2901060 2907737 +
1 domain prediction
 –
Lj4g3v0341070.1
n.a. PREDICTED: potassium transporter 7-like [Glycine max] gi|356524834|ref|XP_003531033.1| chr4 4522231 4528309 +
1 domain prediction
 –
Lj4g3v0341070.2
n.a. PREDICTED: potassium transporter 7-like [Glycine max] gi|356524834|ref|XP_003531033.1| chr4 4522951 4528309 +
1 domain prediction
 –
Lj4g3v1235950.1
n.a. PREDICTED: potassium transporter 7-like [Cicer arietinum] gi|502077175|ref|XP_004485577.1| chr4 18389674 18395090 -
1 domain prediction
 –
Lj4g3v2641090.1
n.a. Potassium transporter [Medicago truncatula] gi|357519235|ref|XP_003629906.1| chr4 35963034 35968919 +
1 domain prediction
 –
Lj4g3v3002280.1
n.a. PREDICTED: potassium transporter 3-like [Glycine max] gi|356527658|ref|XP_003532425.1| chr4 39600024 39603542 -
1 domain prediction
 –
Lj4g3v3002280.2
n.a. PREDICTED: potassium transporter 3-like [Glycine max] gi|356527658|ref|XP_003532425.1| chr4 39601350 39603542 -
1 domain prediction
 –
Lj4g3v3116360.1
n.a. Potassium transporter [Medicago truncatula] gi|357521699|ref|XP_003631138.1| chr4 42290657 42295124 +
1 domain prediction
 –
Lj6g3v1382280.1
n.a. PREDICTED: potassium transporter 11-like [Glycine max] gi|356510798|ref|XP_003524121.1| chr6 16477376 16482739 +
1 domain prediction
 –
Lj6g3v2218330.1
n.a. PREDICTED: potassium transporter 7-like [Cicer arietinum] gi|502077175|ref|XP_004485577.1| chr6 25736619 25742438 -
1 domain prediction
 –
LotjaGi1g1v0117800.1
n.a. Potassium transporter; TAIR: AT2G30070.1 potassium transporter 1; Swiss-Prot: sp|O22397|POT1_ARATH Potassium transporter 1; TrEMBL-Plants: tr|G7K729|G7K729_MEDTR Potassium transporter; Found in the gene: LotjaGi1g1v0117800 LjG1.1_chr1 18506657 18512317 -
2 domain predictions
3 GO terms
LotjaGi1g1v0117800.2
n.a. Potassium transporter; TAIR: AT2G30070.2 potassium transporter 1; Swiss-Prot: sp|O22397|POT1_ARATH Potassium transporter 1; TrEMBL-Plants: tr|G7K729|G7K729_MEDTR Potassium transporter; Found in the gene: LotjaGi1g1v0117800 LjG1.1_chr1 18506882 18509788 -
2 domain predictions
3 GO terms
LotjaGi1g1v0117800.3
n.a. Potassium transporter; TAIR: AT2G30070.1 potassium transporter 1; Swiss-Prot: sp|O22397|POT1_ARATH Potassium transporter 1; TrEMBL-Plants: tr|G7K729|G7K729_MEDTR Potassium transporter; Found in the gene: LotjaGi1g1v0117800 LjG1.1_chr1 18506882 18511840 -
2 domain predictions
3 GO terms
LotjaGi1g1v0307900.1
n.a. Potassium transporter; TAIR: AT2G40540.1 potassium transporter 2; Swiss-Prot: sp|O22881|POT2_ARATH Potassium transporter 2; TrEMBL-Plants: tr|K7KV21|K7KV21_SOYBN Potassium transporter; Found in the gene: LotjaGi1g1v0307900 LjG1.1_chr1 74882663 74887394 -
2 domain predictions
3 GO terms
LotjaGi1g1v0307900.2
n.a. Potassium transporter; TAIR: AT2G40540.1 potassium transporter 2; Swiss-Prot: sp|O22881|POT2_ARATH Potassium transporter 2; TrEMBL-Plants: tr|K7KV21|K7KV21_SOYBN Potassium transporter; Found in the gene: LotjaGi1g1v0307900 LjG1.1_chr1 74882731 74887569 -
2 domain predictions
3 GO terms
LotjaGi1g1v0605900.1
n.a. Potassium transporter; TAIR: AT5G14880.1 Potassium transporter family protein; Swiss-Prot: sp|Q9M7J9|POT8_ARATH Potassium transporter 8; TrEMBL-Plants: tr|A0A0L9U649|A0A0L9U649_PHAAN Potassium transporter; Found in the gene: LotjaGi1g1v0605900 LjG1.1_chr1 115073934 115089574 -
2 domain predictions
3 GO terms
LotjaGi2g1v0105400.1
n.a. Potassium transporter; TAIR: AT3G02050.1 K+ uptake transporter 3; Swiss-Prot: sp|Q9LD18|POT4_ARATH Potassium transporter 4; TrEMBL-Plants: tr|A0A0S3RW70|A0A0S3RW70_PHAAN Potassium transporter; Found in the gene: LotjaGi2g1v0105400 LjG1.1_chr2 35622728 35650234 -
2 domain predictions
3 GO terms
LotjaGi2g1v0105400.2
n.a. Potassium transporter; TAIR: AT3G02050.1 K+ uptake transporter 3; Swiss-Prot: sp|Q9LD18|POT4_ARATH Potassium transporter 4; TrEMBL-Plants: tr|A0A0S3RW70|A0A0S3RW70_PHAAN Potassium transporter; Found in the gene: LotjaGi2g1v0105400 LjG1.1_chr2 35623132 35649072 -
2 domain predictions
3 GO terms
LotjaGi2g1v0193000.1
n.a. Potassium transporter; TAIR: AT4G13420.1 high affinity K+ transporter 5; Swiss-Prot: sp|Q9M7K4|POT5_ARATH Potassium transporter 5; TrEMBL-Plants: tr|A0A1J7GPN9|A0A1J7GPN9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0193000 LjG1.1_chr2 62502894 62506813 -
2 domain predictions
3 GO terms
LotjaGi2g1v0193700.1
n.a. Potassium transporter; TAIR: AT4G13420.1 high affinity K+ transporter 5; Swiss-Prot: sp|Q9M7K4|POT5_ARATH Potassium transporter 5; TrEMBL-Plants: tr|A0A1J7GPN9|A0A1J7GPN9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0193700 LjG1.1_chr2 62617397 62621392 +
2 domain predictions
3 GO terms
LotjaGi2g1v0248900.1
n.a. Potassium transporter; TAIR: AT5G14880.1 Potassium transporter family protein; Swiss-Prot: sp|Q9M7J9|POT8_ARATH Potassium transporter 8; TrEMBL-Plants: tr|A0A072U5F4|A0A072U5F4_MEDTR Potassium transporter; Found in the gene: LotjaGi2g1v0248900 LjG1.1_chr2 71452525 71458877 +
2 domain predictions
3 GO terms
LotjaGi2g1v0319600.1
n.a. Potassium transporter; TAIR: AT1G70300.1 K+ uptake permease 6; Swiss-Prot: sp|Q8W4I4|POT6_ARATH Potassium transporter 6; TrEMBL-Plants: tr|A0A151TGM5|A0A151TGM5_CAJCA Potassium transporter; Found in the gene: LotjaGi2g1v0319600 LjG1.1_chr2 79440073 79445169 -
2 domain predictions
3 GO terms
LotjaGi2g1v0319600.2
n.a. Potassium transporter; TAIR: AT1G70300.1 K+ uptake permease 6; Swiss-Prot: sp|Q8W4I4|POT6_ARATH Potassium transporter 6; TrEMBL-Plants: tr|A0A151TGM5|A0A151TGM5_CAJCA Potassium transporter; Found in the gene: LotjaGi2g1v0319600 LjG1.1_chr2 79440124 79445231 -
2 domain predictions
3 GO terms
LotjaGi3g1v0386000.1
n.a. Potassium transporter; TAIR: AT4G13420.1 high affinity K+ transporter 5; Swiss-Prot: sp|Q9M7K4|POT5_ARATH Potassium transporter 5; TrEMBL-Plants: tr|I1NCT8|I1NCT8_SOYBN Potassium transporter; Found in the gene: LotjaGi3g1v0386000 LjG1.1_chr3 78128441 78137537 -
2 domain predictions
3 GO terms
LotjaGi4g1v0016300.1
n.a. Potassium transporter; TAIR: AT2G30070.1 potassium transporter 1; Swiss-Prot: sp|Q67UC7|HAK17_ORYSJ Probable potassium transporter 17; TrEMBL-Plants: tr|Q5J884|Q5J884_LOTJA Potassium transporter; Found in the gene: LotjaGi4g1v0016300 LjG1.1_chr4 2035007 2039990 -
2 domain predictions
3 GO terms
LotjaGi4g1v0016300.2
n.a. Potassium transporter; TAIR: AT2G30070.1 potassium transporter 1; Swiss-Prot: sp|Q67UC7|HAK17_ORYSJ Probable potassium transporter 17; TrEMBL-Plants: tr|Q5J884|Q5J884_LOTJA Potassium transporter; Found in the gene: LotjaGi4g1v0016300 LjG1.1_chr4 2035454 2039870 -
2 domain predictions
3 GO terms