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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0117800 |
| Transcript ID | LotjaGi1g1v0117800.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Potassium transporter; TAIR: AT2G30070.2 potassium transporter 1; Swiss-Prot: sp|O22397|POT1_ARATH Potassium transporter 1; TrEMBL-Plants: tr|G7K729|G7K729_MEDTR Potassium transporter; Found in the gene: LotjaGi1g1v0117800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:18506882..18509788) extracted from Lotus japonicus Gifu genome v1.2.
TTAAATCTATTCATAGTTTTTAAAAATCCACATGTTTTTTTGCAGATTATGTTGTTATAATCTCATGTATTATTTTAGTG GGCCTTTTCTCCATTCAGCATCATGGGACACACAGAGTTGCCTTCATGTTTGCCCCAGTTGTTGCAGCATGGCTTTTGTG TATCAGTGGTATTGGTATATACAACATATTCCACTGGAATCCGCAAATATACCGAGCACTTTCTCCGGTCTATATGTTCA GATTCCTCAAAGCCACTGGTACTGAAGGATGGATGTCATTAAGTGGAGTGGTGCTTTCGATCACAGGTAATTGCAATAGT TGATTTTATTATCTTCTGAAGAGTTGTGAAACTAATTTTCATGTGTTTCAGGGGTGGAGACAATGTATGCTGACTTGGGT CATTTTTCTGCTCTCTCAATAAAGGTAAGTTCAGATTATGATTGGTCCTAGGACTTCTAATCTTCTTAACATGGTTTTTC ATCATTATAACATGTTTGGGTGAAATTCCTAGAAGTACTTGAGGCTGACAAAATCACATTGAGGAAAAAGCAAAAAGACC AAGCTTTTGAGTTAACTTGAAAGTGATTTTAACTCTTCTCACAAGACATAAAAATAGCTTTTATAGTAAATGCATCCAAA CATAAATTACTCAACTCACATTTACCAAAATCAATTTTGTCAAACTCAATTCTCTGCAAGATTACTTCTCCCGATGCTAA ACCTAACATGCACTTAGTCTACCATACAAAAATGAATTCTGATTTTAACATTTGCACTTAAATCTCAGATAGCTTTCACA TGTCTTGTATATCCCTGCCTGATTTTGGCATACATGGGAGAGGCTGCATTTCTCTCTAAGAACCACTCTGACATTCAAAG AAGTTTCTACAAAGCCATACCAGGCAAGAAACCATTTAAACAACTGCAATTGTCAATGTTATTTATGGTCTCTCAAGTGT AACTGTGCCAATGTTTTTCTGCAGAAACTGTATTTTGGCCAGTTTTCATAGTGGCCACTCTTGCTGCTGTTATAGGAAGT CAAGCAGTGATTTCTGCTACTTTTTCCATCATAAGCCAGTGCTGTGCATTGAATTGCTTCCCTCGCGTTAAGATTGTTCA TACTTCAAGCAGAATTTATGGGCAGATTTATGTCCCAGAAATTAATTGGTTATTAATGTGCCTTTGTTTAGCTGTCACAA TTGGCCTAAGGGATACAAACATGATGGGTCATGCATATGGTACACTTCTTTAAAAAGAACTTCTTTTCCACTGTGGTTAC TTATGATATTTGAAGCATTGACAAGTAAACTTAGGTCCGTTTGGAAGAGTTAATTTGAGTTTGGCTTAAAACATAAGTGC TTATACAAGTGTCTGCTTATAGTTTATATTCTACCTATAAGCAGTTTTTAGCTTATTTTCATAAGCTACTCAAATTAGCT TATGAATAAGCGCTTATACGTACTTATAACCTGTTTTGAACTTACTTTGATAAGTTTATCAAATTAGCTTATTGGCGTAA GCCCTTATTGGCATAAGCGCTAAATTAATAGGGTGTTTGAATCACCGTTGTCATAATTGATTTTGTCAAAATTGATTATA GTAAATGTGAGTTGAAAGTAAAGTGATTTATGTTCGGATACAATTATGAAAAAAAGTGTTTTTGTAGGGCAATTTTATGA ATTCTAATTGTAAAATCTCCTAATTGATTTATGTTCAACACTGAAACTACTCTTTCTAGCTTCTAGGAGAATTGATTTTG GGACTGATATCAATTTTCCAAAATGACTCACAAACATTTATATTGACAACCAAAATTGACTATTCTCTATCAGAATTGAT TCTGAGTTTCTTCAATGGGAAACCAAACACACTCTGACCTGTTTACCTAGACACACTCTTAAACATTTTTTTTTGGGTTT GCAGGGCTGGCTATCACAACTGTTATGTTTGTGACAACATGCTTGATGACACTAGTGATTGTGATTGTGTGGAAGCAAGG GATAATAAAAGCCCTTGCATGTTTGCTCTTGTTTGGATCAATTGAACTTCTCTACATCTCAGCTTCTATTTGCAAAGTTC CTGAAGGAGGGTGGATCCCACTAGTGCTATCTTTCATTTTCATGGGGATAATGTTCACTTGGAACTATGGAACAATGAAG AAACACCAATTTGATGTGGAGAACAAGGTTTCAATGAGCAAGATACTATCCTTGGGACCTTGCTTAGGCATGGTCAGGGT CCCTGGAATAGGACTTGTCTTCAATAACTTGACTTCAGGAATCCCTGCCATTTTTGGCCATTTTGTTACAAATTTGCCAG CATTCCATCAGGTTTTGGTGTTTGTGTGTGCCAAATCTATTCAAGTCCCTCATGTCGGTGAAAATGAAAGGCTGGTCATT AGTAGAATTGGTCCAAAAGAGTACCACATGTTTCGTTGCATAGTCAGATATGGCTACAAGGATATGCAACAAGAGAATTA CAATTTTGAGAACAACATGGTATCTGCGATAATACAATTTGTAGAAAAAGAAGAGGACATTCGAGAACAAACACATGAAT TGTCCATGGATGATGCAATGGAAGACCTTGGTGCTTCATATTCACAACACACTTTGAATAGGTCATGTTGTGAAAAGAAA CATGTCCAATTTTCAAGTGTTTCTGGCAATCTTGAAGGTCCTCCCCATAAAGATGAGTCTTTACAGATTTTACAAGCTAA AGAGTCTGGTGTTACATACATACTTGGCCATTCCTATGCAGAGGCAAAAAGACCATCCTCCATGTTGAAGAAATTTGCAA TAGATGTTGTTTTTGCTTTTCTAAGCAAGAATTGCAGAGACCCTGATATTGTTCTGGATGTAGCTCATACTTCCTTGCTA GAAGTTGGTATGGTTTACCACGTCTAA
CDS sequence (LotjaGi1g1v0117800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGCCCCAGTTGTTGCAGCATGGCTTTTGTGTATCAGTGGTATTGGTATATACAACATATTCCACTGGAATCCGCA AATATACCGAGCACTTTCTCCGGTCTATATGTTCAGATTCCTCAAAGCCACTGGTACTGAAGGATGGATGTCATTAAGTG GAGTGGTGGCTTTCACATGTCTTGTATATCCCTGCCTGATTTTGGCATACATGGGAGAGGCTGCATTTCTCTCTAAGAAC CACTCTGACATTCAAAGAAAAACTGTATTTTGGCCAGTTTTCATAGTGGCCACTCTTGCTGCTGTTATAGGAAGTCAAGC AGTGATTTCTGCTACTTTTTCCATCATAAGCCAGTGCTGTGCATTGAATTGCTTCCCTCGCGTTAAGATTGTTCATACTT CAAGCAGAATTTATGGGCAGATTTATGTCCCAGAAATTAATTGGTTATTAATGTGCCTTTGTTTAGCTGTCACAATTGGC CTAAGGGATACAAACATGATGGGTCATGCATATGGGCTGGCTATCACAACTGTTATGTTTGTGACAACATGCTTGATGAC ACTAGTGATTGTGATTGTGTGGAAGCAAGGGATAATAAAAGCCCTTGCATGTTTGCTCTTGTTTGGATCAATTGAACTTC TCTACATCTCAGCTTCTATTTGCAAAGTTCCTGAAGGAGGGTGGATCCCACTAGTGCTATCTTTCATTTTCATGGGGATA ATGTTCACTTGGAACTATGGAACAATGAAGAAACACCAATTTGATGTGGAGAACAAGGTTTCAATGAGCAAGATACTATC CTTGGGACCTTGCTTAGGCATGGTCAGGGTCCCTGGAATAGGACTTGTCTTCAATAACTTGACTTCAGGAATCCCTGCCA TTTTTGGCCATTTTGTTACAAATTTGCCAGCATTCCATCAGGTTTTGGTGTTTGTGTGTGCCAAATCTATTCAAGTCCCT CATGTCGGTGAAAATGAAAGGCTGGTCATTAGTAGAATTGGTCCAAAAGAGTACCACATGTTTCGTTGCATAGTCAGATA TGGCTACAAGGATATGCAACAAGAGAATTACAATTTTGAGAACAACATGGTATCTGCGATAATACAATTTGTAGAAAAAG AAGAGGACATTCGAGAACAAACACATGAATTGTCCATGGATGATGCAATGGAAGACCTTGGTGCTTCATATTCACAACAC ACTTTGAATAGGTCATGTTGTGAAAAGAAACATGTCCAATTTTCAAGTGTTTCTGGCAATCTTGAAGGTCCTCCCCATAA AGATGAGTCTTTACAGATTTTACAAGCTAAAGAGTCTGGTGTTACATACATACTTGGCCATTCCTATGCAGAGGCAAAAA GACCATCCTCCATGTTGAAGAAATTTGCAATAGATGTTGTTTTTGCTTTTCTAAGCAAGAATTGCAGAGACCCTGATATT GTTCTGGATGTAGCTCATACTTCCTTGCTAGAAGTTGGTATGGTTTACCACGTCTAA
Protein sequence (LotjaGi1g1v0117800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFAPVVAAWLLCISGIGIYNIFHWNPQIYRALSPVYMFRFLKATGTEGWMSLSGVVAFTCLVYPCLILAYMGEAAFLSKN HSDIQRKTVFWPVFIVATLAAVIGSQAVISATFSIISQCCALNCFPRVKIVHTSSRIYGQIYVPEINWLLMCLCLAVTIG LRDTNMMGHAYGLAITTVMFVTTCLMTLVIVIVWKQGIIKALACLLLFGSIELLYISASICKVPEGGWIPLVLSFIFMGI MFTWNYGTMKKHQFDVENKVSMSKILSLGPCLGMVRVPGIGLVFNNLTSGIPAIFGHFVTNLPAFHQVLVFVCAKSIQVP HVGENERLVISRIGPKEYHMFRCIVRYGYKDMQQENYNFENNMVSAIIQFVEKEEDIREQTHELSMDDAMEDLGASYSQH TLNRSCCEKKHVQFSSVSGNLEGPPHKDESLQILQAKESGVTYILGHSYAEAKRPSSMLKKFAIDVVFAFLSKNCRDPDI VLDVAHTSLLEVGMVYHV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 498 | 498 | 1.3E-255 | ||
| Phobius | 1 | 5 | 5 | - | – | |
| PANTHER | 1 | 498 | 498 | 1.3E-255 | – | |
| TMHMM | 5 | 22 | 18 | - | – | |
| Phobius | 6 | 22 | 17 | - | – | |
| Phobius | 23 | 48 | 26 | - | – | |
| Phobius | 49 | 70 | 22 | - | – | |
| TMHMM | 49 | 71 | 23 | - | – | |
| Pfam | 56 | 351 | 296 | 1.7E-84 | ||
| Phobius | 71 | 89 | 19 | - | – | |
| Phobius | 90 | 116 | 27 | - | – | |
| TMHMM | 95 | 117 | 23 | - | – | |
| Phobius | 117 | 136 | 20 | - | – | |
| Phobius | 137 | 159 | 23 | - | – | |
| TMHMM | 138 | 160 | 23 | - | – | |
| Phobius | 160 | 170 | 11 | - | – | |
| TMHMM | 170 | 192 | 23 | - | – | |
| Phobius | 171 | 194 | 24 | - | – | |
| Phobius | 195 | 200 | 6 | - | – | |
| TMHMM | 197 | 216 | 20 | - | – | |
| Phobius | 201 | 220 | 20 | - | – | |
| Phobius | 221 | 225 | 5 | - | – | |
| Phobius | 226 | 244 | 19 | - | – | |
| TMHMM | 226 | 248 | 23 | - | – | |
| Phobius | 245 | 264 | 20 | - | – | |
| Phobius | 265 | 284 | 20 | - | – | |
| Phobius | 285 | 498 | 214 | - | – | |
| Coils | 496 | 498 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Potassium ion transmembrane transporter activity | Enables the transfer of potassium ions (K+) from one side of a membrane to the other. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Potassium ion transmembrane transport | A process in which a potassium ion is transported from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0117800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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