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LotjaGi1g1v0172900.2

Overview

Field Value
Gene ID LotjaGi1g1v0172900
Transcript ID LotjaGi1g1v0172900.2
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Receptor-like protein kinase; TAIR: AT5G38280.1 PR5-like receptor kinase; Swiss-Prot: sp|P93604|LRK10_WHEAT Rust resistance kinase Lr10; TrEMBL-Plants: tr|A0A072VQK7|A0A072VQK7_MEDTR Stress-induced receptor-like kinase, putative; Found in the gene: LotjaGi1g1v0172900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:32886407..32889852) extracted from Lotus japonicus Gifu genome v1.2.

CCACTTTTATACAAGAAATGAACAGCTCTTCATTCCATCTGTTTGATCAAAAAACTTATAAATCCTTGCGTGCAGCATAT TCACAGAGTATTGGCATTAATCTATGGAAAATGATGGTCAACACTCAACAATATGCTCAGGAATATGCTTCTTCTGTATC AACATTCTGTCTATTTCACATTTTTGCAAATCACATGAAACAAATTCAAGATTGCAATGCAAATGTCATAGATATAGATG CGAAAAACAAACGTGCTACTTGCCTTATCACCATTAGGAACGCAGAGAGTAGGATCATAAGTAATTTTAAGACCACCAAA TCTTTGATACCAGTACTTAGGATTGGTTCACTGAAACTAAATACTTCAGCTTAGTGGATTTTTCTGAGTCTCTATTTTCC CATGTCTTGGAGAAGGTTTCTCCTTAATGTAACCCTTCTTGTGGTCCTTGTATACCCACTTCCTTGCCTAACAGAGAGAA ATCACCAATGTCCCCTTTCATCTTGTGGCAATATACAAAATATCAGTTACCCTTTTCGGCTACAAGCTGATCCTCAAAAC TGTGGAGACCCCAGATATGAACTTGTATGTGAGAACAATCAAACAGTGCTAAATTTATACAATGGAAAATATTCTGTTCA GACCATCAACTACAATAATTCCACAATAAGGGTCACAGATTTGGGTATCAGAAAAGACAATTGCTCTTCCATTCCTCTCT ACACTTTAACGCATGACAACTTCAGCTCTGGACAACCTTTTAGCTTGTTGGGTGGCAGTAACTTGGATGTCATAGCATTT ATGAGCTGTGAAGTCCCAATTATATCCCCTCTCTACATTGATATTGCAGCTTGTACCAAAAGCTCCAGCTCCTCTATTTC TTCTTTCACTCCAAATAAGTACAACTTTGCTGTACATGGGGATTTGAAGATCTCTGAGTTGGAGGCGTCATGCAGCGTAC TTGTTATGGTTATGACTTCAAATTTCAGCAGAGATGACCTGAACCTTTCATATTCAAATCTCCACCAGAACCTGGTTGAT GGGCTACAGCTTTCTTGGGGAAATATAACCTGCCATGAGTGCGAAGAACGGGGCTATGGTAAGTTAAACTATAACAATGA GGTCATTGGTTGTGCTAGAAGTTGTACGCATTAAAATATGTATATATCAGCATCTCTTCTGTTCACTTTACTGGCATTTT TCTTTTGGGAGTTCCTTATATGGATAAAATCCCATTTCAAAACCTTCAATTTCGCCCATTCTTTCAGACTTATACCATAT TTGGGTTAGCTTTTTTTTTCAAAATCAATTCAATCACCCAGAAGCTTCTCCCCATAATTGATTTTGTCTTTAGAATCAGT GCTGTTAATCGCAGATCGCGGGAAGCCAAAAATCCGCTATGTCAATCCCTCAAAGCAGAAAATAGTGGTGATCCCTCAGC GCTACGCTATAGCGCTATAGAGCCACTATATCGGCTATTTGACAACACTGGAATCAGTTGTAGAAGGATGTCCAAACATG CTACTATAATAAAAGTTGATTAAATTTGTGTCTTATTTTCTTTGCAAGGCATATGATGAGATAGTTTATGTAAATATAAT TATCATGATTGTAATATAGTTTTGCAGATGAACATGTATTCAATGTATGAATTAGCAATGATTTAAAAACTTCTCTTTGA TGTCTCCCATCCAGTAAAAGTACTTCATCAAGCAGAATCTTTCAGATTGGTTTTGTATAATTACAACGTATAGTAACAGA ATGCTATCAGAACTGTATGCAGAAAATTCTTTTTTCCATTCACAGTTTCATGAAATATTTTTCTCAAAGCTCTTTTTTAC TTCTACATATGATATATTGATATCTCATCTAGGGGCTTAAATGTTTGTACTGTATTGTACACATGTTTTATTTCTTTTCG TACCAGCAAAACACATGTTTATTGTTTTTGGTATACTTATATATTTTTATTTTACAGGTCTTCACAAATTTGGCGTTATC ATTGGTATGTTGCTTAAGTACTATATATGTTGTTTTGTATCTAAATTGTACAGCTCAAATTCATGGTTAATAGCCATTGA AATAAAAAGAGAAACAACTCAGAATGAAATTTTAATTTGTAGCGGAGTTCTTAAACATTTATTTCTGGTTTTTCAAAACA GGAGTTATCGTTCTCATAAGAATCACAGGTGGAGTACTATTTATCTTTATGTACACGGTATATAAGTGGCAAAGGAGGCA TTTATCTGCGTACGACTCAGTTGAAGAGTTCCTCAAAACTCACAACAATCTCATGCCAATTAGGTACTCCTACTCCGAGA TTAAAAAGATCACTAAAGGGTTCAAGGATAAACTTGGTGAGGGAGGCTATGGCTCTGTTTACAAAGGAACACTTCGCAAC GGACATCTCGTAGCAATCAAGATGCTAGGTGGAAAGTCCAGAGCAAATGGTCAAGAATTCATCAATGAAGTTGCCACTAT TGGAACAATTCACCATGTGAACGTGGTGCACCTCATTGGCTTCTGCGTTGAGAAATCAAAAAGAGCTCTTGTCTATGAAT TCATGCCCAATGGTTCCCTTGACAAGCACATTTTTTCACGAGAAGCAACAATCGCCTTGAGCTGGGAGAAAATGTTTGAC ATCGCTCTTGGTGTGGCTCGCGGTATTGAATATCTACATCGAGGGTGTGACATGAGGATCTTGCACTTCGACATTAAGCC TCATAATATTCTTCTTGATGAGAACTTCACTCCAAAAGTTTCGGATTTTGGGCTGGCAAAGCTCTACCCAACTGATAACA GCATTGTGACCCTCACAGCTGCAAGAGGAACCATGGGGTACATGGCACCTGAGTTGTTCTACAAGAACATTGGAGGCGTT TCATACAAGGCAGATGTTTATAGCTTTGGAATGTTGTTGATGGAAATGGCGAGCAGGAGAAAGAACATGAACGAGCGCGT GGATCGTCCAAGCCAGGTTTATTTTCCTTCTTGGGTTTACCAGCAATTCAGTGAAGGGAAGGAAATAGAAATGGGGATAA ATGCTGTAGAGGAGGACAGGACAATTCTGAAGAAGATGATATTAGTTGCTTTGTGGTGCATACAGATGAAGCCTAGTGAT CGACCTTCAATGAACAGAGTGGTTGAGTTGCTTGAAGGAGATGTTGAGTTGCTTGAAATGCCTCCCAAGCCATTTCAAAC TCCAAAGGGAATGTCAGTACAAGGAGGCATTGGAAATTTCAGAAATCTACCTTGGTTGCCACCACCTGGGGACTCTTCAA ACTCACTAACCATAGTTATAAATCAACGTTAAGATATTTAGTACTAAATTTATTGTAATATTATTCTTCTCTGTTTGGTT TATGATTAAGCACTAGTAACTAAATTTGTACCAGAGAATTATTGATCAAGAGGGGGTTTAAATGTGTTTTTCTTTCTCAG ATGGTG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0172900.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTACACGGTATATAAGTGGCAAAGGAGGCATTTATCTGCGTACGACTCAGTTGAAGAGTTCCTCAAAACTCACAACAA TCTCATGCCAATTAGGTACTCCTACTCCGAGATTAAAAAGATCACTAAAGGGTTCAAGGATAAACTTGGTGAGGGAGGCT ATGGCTCTGTTTACAAAGGAACACTTCGCAACGGACATCTCGTAGCAATCAAGATGCTAGGTGGAAAGTCCAGAGCAAAT GGTCAAGAATTCATCAATGAAGTTGCCACTATTGGAACAATTCACCATGTGAACGTGGTGCACCTCATTGGCTTCTGCGT TGAGAAATCAAAAAGAGCTCTTGTCTATGAATTCATGCCCAATGGTTCCCTTGACAAGCACATTTTTTCACGAGAAGCAA CAATCGCCTTGAGCTGGGAGAAAATGTTTGACATCGCTCTTGGTGTGGCTCGCGGTATTGAATATCTACATCGAGGGTGT GACATGAGGATCTTGCACTTCGACATTAAGCCTCATAATATTCTTCTTGATGAGAACTTCACTCCAAAAGTTTCGGATTT TGGGCTGGCAAAGCTCTACCCAACTGATAACAGCATTGTGACCCTCACAGCTGCAAGAGGAACCATGGGGTACATGGCAC CTGAGTTGTTCTACAAGAACATTGGAGGCGTTTCATACAAGGCAGATGTTTATAGCTTTGGAATGTTGTTGATGGAAATG GCGAGCAGGAGAAAGAACATGAACGAGCGCGTGGATCGTCCAAGCCAGGTTTATTTTCCTTCTTGGGTTTACCAGCAATT CAGTGAAGGGAAGGAAATAGAAATGGGGATAAATGCTGTAGAGGAGGACAGGACAATTCTGAAGAAGATGATATTAGTTG CTTTGTGGTGCATACAGATGAAGCCTAGTGATCGACCTTCAATGAACAGAGTGGTTGAGTTGCTTGAAGGAGATGTTGAG TTGCTTGAAATGCCTCCCAAGCCATTTCAAACTCCAAAGGGAATGTCAGTACAAGGAGGCATTGGAAATTTCAGAAATCT ACCTTGGTTGCCACCACCTGGGGACTCTTCAAACTCACTAACCATAGTTATAAATCAACGTTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0172900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MYTVYKWQRRHLSAYDSVEEFLKTHNNLMPIRYSYSEIKKITKGFKDKLGEGGYGSVYKGTLRNGHLVAIKMLGGKSRAN GQEFINEVATIGTIHHVNVVHLIGFCVEKSKRALVYEFMPNGSLDKHIFSREATIALSWEKMFDIALGVARGIEYLHRGC DMRILHFDIKPHNILLDENFTPKVSDFGLAKLYPTDNSIVTLTAARGTMGYMAPELFYKNIGGVSYKADVYSFGMLLMEM ASRRKNMNERVDRPSQVYFPSWVYQQFSEGKEIEMGINAVEEDRTILKKMILVALWCIQMKPSDRPSMNRVVELLEGDVE LLEMPPKPFQTPKGMSVQGGIGNFRNLPWLPPPGDSSNSLTIVINQR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27009:SF61
2 357 356 5.2E-215 –
PANTHER
PTHR27009
2 357 356 5.2E-215 –
Gene3D
G3DSA:3.30.200.20
16 118 103 1.2E-28 –
SUPERFAMILY
SSF56112
24 315 292 1.18E-77
IPR011009
ProSiteProfiles
PS50011
43 322 280 38.746
IPR000719
SMART
SM00220
43 315 273 3.0E-34
IPR000719
Pfam
PF00069
46 312 267 4.8E-49
IPR000719
CDD
cd14066
49 317 269 3.48065E-93 –
ProSitePatterns
PS00107
49 71 23 -
IPR017441
Gene3D
G3DSA:1.10.510.10
119 322 204 1.2E-53 –
ProSitePatterns
PS00108
164 176 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0172900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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