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LotjaGi1g1v0477000.2

Overview

Field Value
Gene ID LotjaGi1g1v0477000
Transcript ID LotjaGi1g1v0477000.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT2G45910.1 U-box domain-containing protein kinase family protein; Swiss-Prot: sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33; TrEMBL-Plants: tr|G7L4P0|G7L4P0_MEDTR U-box kinase family protein; Found in the gene: LotjaGi1g1v0477000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:98867769..98874020) extracted from Lotus japonicus Gifu genome v1.2.

CTTTATTAACATGGGCTCCTTCTGTTTGGACACTGCAATGATATCGTATTAGAAGTTAAGACAAGGTTGCTCTTTACAGA GGAAACGATGTATTGACTTCAACAAAAACTCCCAACCACACGGTTCTCCCTTTTAGCTCTCTCATGCCTTCTGTAATCAC TCTGAAAGTTCAAAGCTTTGATGTTAACTGTTAATGGAGCCATCACCCTCTATGTGTTTGTGAAATTGCCTGAACAAAAA AGCTAAGGTTAACTTTTTTTTTTTCCTTTTCCAATTTTGCTCTTGGGGGGTAATTTTCAATTTTCTTGAGATCCCACACA GAAAGTTTCAATCTTTGGTGGGTTTTCTGAGTTCCTGAGAGAGGATTTTTGATGGGTTTGTGAGATTTTGATGATTAAGT TTCTGGGTTGATAGCAAAATCTGTGATTGTGTGTGTAAAGAGAGTTTTTTTTTATTGAATGGTTCAGTAATTCGGAATCT CTTAGCATGGCTGTGGTGTGTCCTGTGCCTGCAACAACACAAAGGAGTGGTTCTGTGAGTTCTGTTGGTGAAATTGTGGG GGAAATTGCAGAGGAGCCTAATCCAACTATGGTTGATGAACCAATCTATGTTGCTGTGTCAAAGGATATAAAAGAGAGCA AATTGAATCTGATATGGGCCATTCAGAACTCTGGAGGGAAGAGGATTTGCATCCTCTTTGTTCATGTGCCTGCAACAATG ATACCCTTGAGTAAGTTTTCTGTGTACTATGTGTGTGTGTGTATATTTATAGTTATATACTATATGCTTCTCTATATGTT CTTGTTGTTTGATAACTTTAATTTCATAGATTCTCTTGAATGGAACTTTACACTTGCGAAATTGACTCAACTTGGACTCA ATATTTCGCATACTCTTTGATGATCAATACTTTTGAAATTATCTGATGAATTGAATTAGAACGAAACAAGGCCACCAAGA TAATTAGGCCTTATTTTAAAATCTACTTTTATGATTCATATGTTGGCTGCCCTTTAAATTTTCATTGTTTAAAGATTTAC TTGTCTAGTTTATGATGTTGTTGGGACTGGGAGGTATTTGTCATGCTGATGATTTTCATTGAAGTAGTTAATTTCAAGAA CTAAATTTAGCTATAAATATATATAGTAACTCTTGAATATCTCTTCTGCGCTGTGTTTGTCATTTGCAGAATGTTCAGTT TCTGATAAGGGTTTATAACTCTGATTTTAACTTTCTTGGTTATAGTGGGTGCCAAATTTCCTGCAAGTTCACTGAAAGAT CAGGAAGTCCGAGCATACCGGGAAATTGAAAGGCAAAACATGCACAAGACTCTGGATGAGTATCTTCGTATCTGTCAACG GATGGGGGTAATTGTTGTCGTAATTTGATACACATGTATTTTGGAAGTTTAGTTTTCCACTAACAACTTTCTGATACAGG TGCGAGCAGAAAAACTGCATATTGAAATGGACAGCATTGAAAGAGGAATTCTAGAACTTGTCTCCCAGTATGGTATCCGA AAGCTTGTTATGGGAGCAGCATGTGATAAGCACTATTCTAGGTAAGAAGCCAGATAAAAACCCCAAACTACATTTTTATT TTGTCATTTTCGCTGGAAATTCAATGATTATGATGTGAAAGTACTGAAGATGGTATATTAGTTCCACTAATCATGTACGG CGCAAATAGCTACAGTAGTTGCCGGTTCTAGGCTTGGAATTTTTCAGTGAGGCATGTTATATCTTCTTTGTTTTCAGTAG CTAGTTCCATGACTTTCTAAGCTATGGAGCTGGGACTATGTCTCTCCCCTTTGATTCTATTTTCGCTAGGGTGTTTTGGT TGCGTGGAGCCATCGTAGTCCTTTCCCCAATCTATGTCAACTTGTAATTTATACAGAATTTATGCTTTAGTTCATAAGTT CTGATGATCAACTAACTATTTGTATCTTGAGAATTTTCTAATCTCTATGTCAGTTTTGGTGAAATCAATATTATGTTTTC ATTGAGCTCTCGCATGACATTGCAGGAGAATGGTGGACCTCAGATCTAAGAAAGCCATCTATGTATGTGAACGAGCTCCA GCTTCTTGTCATGTACAGTTTATCTGCAAAGGGCACCTTATACACACAAGGTACAGGACCTCCTGAAATATTAGTGTGTT CTGATACACAAGGGATTTAGAATCACATGAAAGATAAATGTTACTCAAAAGGAAGGTTTGTAGTTGCGACTTGCGAGGAT TAATTAGCACAATATTTGATAATTTAAAGGAAAAACTTATTTCTTTATTTAACAGTCAGCTTTATCATACTATGGTTGTC ATGCTCTTGGTTTTTATTAATTTGGGCACTGAATTACTGATGTAAGTACCATGTCAACACAGGGATCGCAGTTTGGATCA ACGCAATGCCGAGGCTGCATCTCTTTTGGTGCAGCAAGTACCAAACTTGGTGAGATCTTTGAGATCTCAATCACTGGGGC AAAATCTTCAGGCGAGTTCACATAATGCTGCTCAAGAGTTATATCGCAGAGCAAGATCTACCAATGATATCGCAGTTTCT TCTCCCGACGACACTGAAGGTTTTTCAACCCCACGTAATAGGGTGGGTACAGAAGTAAGTTCTGATGAATCAGAACGACC ATCAAGGAGGAGTCCTTCAGGATTTTCAACATGCTCTGACGGTGCAATTGAAGCAGCATTGACCCCGAATTTGATTAATG AGATCAGTGAGAATGTAATAGATTTGACTTTGAGTCACCTGATTAAAGAGGATCTTCGTCATTCATCTCCTCCCAGTGTA CTGGTACACATTCTTTTTTCTTTTAATATTGTTTGTGCCTGTCAGGGAATGTGCATATTTTTGCATGTTGACTTTTTCGC AATTGATGAGAAACAATTTTATGTAATAATAGAGTTTTTCTAATACCAAATTGAATAATGGTTGAACTCTAGCAGGATGG TGGAATGAATGATACTCTCTATGACCAACTTGAACAGTCTATGGCTGAGGCTGAGAATGCTACGCGACATGCATACCAAG AAACTTTTAGGCGTGGGAGAGCCGAAAAAGATGCCATTGAAGCTATACGCAGGGTAACTGTTCTGTTGTGGAGTGCTTCT TATACTTCTTCGATGTATAGATGATTGTTTTTGTGATGTGAATAGTTAATTTTGCCTTTTGCATCAAGTTTCCAAGTTTT AAAAGTCTTCTAAGGCGAAGCAATTATCATACCCAAAGAGAAAATCAAGAAAGTGAAGGATATATCAATCAACCTTAACC ACTGCTAAGATCATTGGAATGAATAGGCATAATTTTAGGTTGTATTATCTATTATCTATAGTCACATGCCAATATTGATA CACCCTCTAACCTTTTTTGCCACAGGCTAAAGCTGCTGAAAGCTTATATGCAGAGGAGTTGAATCTGAGGAAAATGGCTG AGGAAGAACTAGAAACAGAAAAAGAAGAACTTGAGAATTTGAAGAGCCAGGCAGACAAGGTTAAGGAAGAACTCCGGCTT GCCCAGGATCAGAAGTCATCACTAGAGAGTCAACTTGCATCATCTGAACTTATGGTAAAGGAGTTGGAGCAGAAGATTAT ATCTGCTGTGGATCTTTTACAAAACTACAAGAACGAACGAGAAGAATTGGAGGTGCAGCGTGATAGTTTATTGAGAGAGG CAGAAGAGTTGAGGAAAAAACAAGGAGAGGCCTCAAGCTCCCACGTGTCTCAATTGTTTTCAGAATTCTCATTTTCAGAG ATCGAAGAAGCAGCAGGTAACTTCAATCCATCCCTAAAGATTGGAGAAGGTGGATATGGAAGTATATTTAAAGGTGTCCT TCGTCACACTGAGGTAGCTATAAAAATGTTGCACCCCAACAGCATGCAAGGACCCTTGGAGTTTCAACAGGAGGTGAGAT GGTTTGACTTATATGTAATAGTTTGAGCATCATCTGCTTCTGGTCAACAATAATATTCTTTGTCCACAGCAGATCGTCCT TAACTGTTCTTGCTTGCAACTTGCCGATTGCAATCAAAATAATGAATACCAGTTAAAAAGAAAACTGACAAGAATGTGCA GCATCAATTTTTTAAAGTGGCATCAATTTGTTAAAAAATCCCTACTCTGGTACTTTTCATGTTTCTGAAAACTTAGTTGC TCCTTGTCTTAATATATCATCTATTGTCTCTAGAAAGTCTGAAAGAAGAGAAATATGATCCAGCTTTGTAGGGAAAAAGG ATTATTTTGACTCTGCTTTTGGTTTTGTATCAGGTTGATGTCTTGAGCAAGCTAAGACATCCCAATCTTATCACACTTAT AGGAGCCTGCCCAGAATCCTGGGGCCTTGTCTATGAGTATTTACCGAATGGTAGCCTTGAAGACCGTCTTGTTTGCAAGG ATAATACACCTCCGTTATCATGGCAAACTCGGATTCGCATTGCTGCTGAACTGTGCTCTGCCCTCATCTTTCTCCATTCC TGTAAACCTCACAGCATAGTGCATGGTGACCTAAAACCCTCAAATATTCTCCTAGATGCAAACCTTGTTAGCAAGCTTAG TGACTTCGGAATCTGTCGCATATTATCTAATCGCAGTTCTAGTGATAATGCTACACAGTTATGGAGAACTGACCCAAAGG GAACTTTTGTATACATGGATCCTGAATTCCTTGCTTCCGGGGAGCTTACTCCAAAGTCGGATGTTTATTCATTTGGAATC ATACTGATGAGGTTGTTGACTGGGAGACAAGCCTTGGGAATATCAAAGGAGGTGAAATATGCAGTAGATACTGGAAAGTT GAAATCCTTACTGGATCCTTTGGCTGGAGACTGGCCCTTTGTGCAGGCCGAACAGCTGGCTCACTTGGCCTTGCGGTGTT GTGAGATGAGCAGAAAGAGCCGTCCGGACCTGTGCTCGGATGTTTGGAGGATACTGGATGCAATGAGGGCTTCTTCTGGA GGCACAAATTCCTTTGGACTAAGTTCTGAAGGGCTCCACCAACCTCCTTCTTATTTTATTTGTCCAATCTTCCAGGTAAC TGGCTCTGTCTGCCTTTGTTTTTCAGTTTCAGTTTTCAACTCATTGAAGATGTTATGTCCTCATGATCTTTTAGGATCTC CAGCACAATGATCACTTGTCTAAGAAAATGAAATTCATTCCAGTCCTCATTTTTCATTGCAAAGTTGGTCAAAATTTTAT ACTTGCCTATCTCCATTGCGTATGTGTAATTTTTAATTTTGTTATCTTTATGTTCTTAACTTGCACAGCATTTTCCTAAC CTATGGAATGATATAGCCTTGGATACAGAACTTTATGTAAGAAAGCTTCCATTAATTATCGTAAAAAATATAAATATAAA ATCATTCATGTGTCTTCACCAAAAAACTTAATTTTTTTGGGATAGTTGGTTCCTGACATAGTATCGGAGCCTTTGTGACC GAATGGTTTAGAGTTCAATCCTTCGTGCCACAATTTTCTAAACAAGAATATTGAATATCAGTACAAGGCAGATAAACCTG TGCATTGTACACGCTTCAAGCCTTATAAGTTCTTACGTGAGAGGGAGTCCTACAAAATATCAAATCATTCGCGTGTCTTC ACCTAACAGTATAAGTTTTTGAGATAGTTAGTTCACGACTAAATAATGTTCATACTTTGCAGGAAGTCATGCGAGATCCA CATGTAGCTGCAGATGGTTTCACTTATGAAGCTGAGGCTATACGAGGATGGCTTGACAGTGGTCATGACACTTCACCAAT GACAAATAGTAAGCTTGCACATCAGAATCTTGTTCCCAACCGCGCCCTTCGCTCTGCAATCCAGGACTGGCTTCAAAGTC AATGATCAAGCTTATTGTTTTATCAATTTTTATTGTAGTATATATATATCTACCTGTTTATAACATGTCTAGGAAAGAAA GCTGTCTTTACATTTTTTTAAACCTTCTATCAGTTTTGTTTCTTGCAGTCGTATGGAATCAAATTGTATACCTATCTCTT ATATAGGTTAGATTACCAAATGGTGAATCTTTAGTCATTGTAAAAAAAACATAATAATATTAAAAGCATGTATACGTCAA AACAGTTTTCGTGTAATTATCTCTCATATTTGGTAAATTTTATGTGATTTATCTTTAGCAGTAGGTAATAATGTCTGAGA TTAATACAGAAATGTCTAACAGTTGGAAAGGCAGAATGTGGTTCTCCTTTCTTCAGTGGACTTCTCTGAAGCAAATAGCA GCACGACAGGCT 

CDS sequence (LotjaGi1g1v0477000.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTGTGGTGTGTCCTGTGCCTGCAACAACACAAAGGAGTGGTTCTGTGAGTTCTGTTGGTGAAATTGTGGGGGAAAT TGCAGAGGAGCCTAATCCAACTATGGTTGATGAACCAATCTATGTTGCTGTGTCAAAGGATATAAAAGAGAGCAAATTGA ATCTGATATGGGCCATTCAGAACTCTGGAGGGAAGAGGATTTGCATCCTCTTTGTTCATGTGCCTGCAACAATGATACCC TTGATGGGTGCCAAATTTCCTGCAAGTTCACTGAAAGATCAGGAAGTCCGAGCATACCGGGAAATTGAAAGGCAAAACAT GCACAAGACTCTGGATGAGTATCTTCGTATCTGTCAACGGATGGGGGTGCGAGCAGAAAAACTGCATATTGAAATGGACA GCATTGAAAGAGGAATTCTAGAACTTGTCTCCCAGTATGGTATCCGAAAGCTTGTTATGGGAGCAGCATGTGATAAGCAC TATTCTAGGAGAATGGTGGACCTCAGATCTAAGAAAGCCATCTATGTATGTGAACGAGCTCCAGCTTCTTGTCATGTACA GTTTATCTGCAAAGGGCACCTTATACACACAAGGGATCGCAGTTTGGATCAACGCAATGCCGAGGCTGCATCTCTTTTGG TGCAGCAAGTACCAAACTTGGTGAGATCTTTGAGATCTCAATCACTGGGGCAAAATCTTCAGGCGAGTTCACATAATGCT GCTCAAGAGTTATATCGCAGAGCAAGATCTACCAATGATATCGCAGTTTCTTCTCCCGACGACACTGAAGGTTTTTCAAC CCCACGTAATAGGGTGGGTACAGAAGTAAGTTCTGATGAATCAGAACGACCATCAAGGAGGAGTCCTTCAGGATTTTCAA CATGCTCTGACGGTGCAATTGAAGCAGCATTGACCCCGAATTTGATTAATGAGATCAGTGAGAATGTAATAGATTTGACT TTGAGTCACCTGATTAAAGAGGATCTTCGTCATTCATCTCCTCCCAGTGTACTGCAGGATGGTGGAATGAATGATACTCT CTATGACCAACTTGAACAGTCTATGGCTGAGGCTGAGAATGCTACGCGACATGCATACCAAGAAACTTTTAGGCGTGGGA GAGCCGAAAAAGATGCCATTGAAGCTATACGCAGGGCTAAAGCTGCTGAAAGCTTATATGCAGAGGAGTTGAATCTGAGG AAAATGGCTGAGGAAGAACTAGAAACAGAAAAAGAAGAACTTGAGAATTTGAAGAGCCAGGCAGACAAGGTTAAGGAAGA ACTCCGGCTTGCCCAGGATCAGAAGTCATCACTAGAGAGTCAACTTGCATCATCTGAACTTATGGTAAAGGAGTTGGAGC AGAAGATTATATCTGCTGTGGATCTTTTACAAAACTACAAGAACGAACGAGAAGAATTGGAGGTGCAGCGTGATAGTTTA TTGAGAGAGGCAGAAGAGTTGAGGAAAAAACAAGGAGAGGCCTCAAGCTCCCACGTGTCTCAATTGTTTTCAGAATTCTC ATTTTCAGAGATCGAAGAAGCAGCAGGTAACTTCAATCCATCCCTAAAGATTGGAGAAGGTGGATATGGAAGTATATTTA AAGGTGTCCTTCGTCACACTGAGGTAGCTATAAAAATGTTGCACCCCAACAGCATGCAAGGACCCTTGGAGTTTCAACAG GAGGTTGATGTCTTGAGCAAGCTAAGACATCCCAATCTTATCACACTTATAGGAGCCTGCCCAGAATCCTGGGGCCTTGT CTATGAGTATTTACCGAATGGTAGCCTTGAAGACCGTCTTGTTTGCAAGGATAATACACCTCCGTTATCATGGCAAACTC GGATTCGCATTGCTGCTGAACTGTGCTCTGCCCTCATCTTTCTCCATTCCTGTAAACCTCACAGCATAGTGCATGGTGAC CTAAAACCCTCAAATATTCTCCTAGATGCAAACCTTGTTAGCAAGCTTAGTGACTTCGGAATCTGTCGCATATTATCTAA TCGCAGTTCTAGTGATAATGCTACACAGTTATGGAGAACTGACCCAAAGGGAACTTTTGTATACATGGATCCTGAATTCC TTGCTTCCGGGGAGCTTACTCCAAAGTCGGATGTTTATTCATTTGGAATCATACTGATGAGGTTGTTGACTGGGAGACAA GCCTTGGGAATATCAAAGGAGGTGAAATATGCAGTAGATACTGGAAAGTTGAAATCCTTACTGGATCCTTTGGCTGGAGA CTGGCCCTTTGTGCAGGCCGAACAGCTGGCTCACTTGGCCTTGCGGTGTTGTGAGATGAGCAGAAAGAGCCGTCCGGACC TGTGCTCGGATGTTTGGAGGATACTGGATGCAATGAGGGCTTCTTCTGGAGGCACAAATTCCTTTGGACTAAGTTCTGAA GGGCTCCACCAACCTCCTTCTTATTTTATTTGTCCAATCTTCCAGGAAGTCATGCGAGATCCACATGTAGCTGCAGATGG TTTCACTTATGAAGCTGAGGCTATACGAGGATGGCTTGACAGTGGTCATGACACTTCACCAATGACAAATAGTAAGCTTG CACATCAGAATCTTGTTCCCAACCGCGCCCTTCGCTCTGCAATCCAGGACTGGCTTCAAAGTCAATGA 

Protein sequence (LotjaGi1g1v0477000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAVVCPVPATTQRSGSVSSVGEIVGEIAEEPNPTMVDEPIYVAVSKDIKESKLNLIWAIQNSGGKRICILFVHVPATMIP LMGAKFPASSLKDQEVRAYREIERQNMHKTLDEYLRICQRMGVRAEKLHIEMDSIERGILELVSQYGIRKLVMGAACDKH YSRRMVDLRSKKAIYVCERAPASCHVQFICKGHLIHTRDRSLDQRNAEAASLLVQQVPNLVRSLRSQSLGQNLQASSHNA AQELYRRARSTNDIAVSSPDDTEGFSTPRNRVGTEVSSDESERPSRRSPSGFSTCSDGAIEAALTPNLINEISENVIDLT LSHLIKEDLRHSSPPSVLQDGGMNDTLYDQLEQSMAEAENATRHAYQETFRRGRAEKDAIEAIRRAKAAESLYAEELNLR KMAEEELETEKEELENLKSQADKVKEELRLAQDQKSSLESQLASSELMVKELEQKIISAVDLLQNYKNEREELEVQRDSL LREAEELRKKQGEASSSHVSQLFSEFSFSEIEEAAGNFNPSLKIGEGGYGSIFKGVLRHTEVAIKMLHPNSMQGPLEFQQ EVDVLSKLRHPNLITLIGACPESWGLVYEYLPNGSLEDRLVCKDNTPPLSWQTRIRIAAELCSALIFLHSCKPHSIVHGD LKPSNILLDANLVSKLSDFGICRILSNRSSSDNATQLWRTDPKGTFVYMDPEFLASGELTPKSDVYSFGIILMRLLTGRQ ALGISKEVKYAVDTGKLKSLLDPLAGDWPFVQAEQLAHLALRCCEMSRKSRPDLCSDVWRILDAMRASSGGTNSFGLSSE GLHQPPSYFICPIFQEVMRDPHVAADGFTYEAEAIRGWLDSGHDTSPMTNSKLAHQNLVPNRALRSAIQDWLQSQ 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 18 874 857 0.0
PANTHER 18 874 857 0.0
CDD 39 192 154 3.63943E-49
SUPERFAMILY 51 155 105 9.21E-6
MobiDBLite 250 274 25 -
MobiDBLite 250 297 48 -
Coils 348 368 21 -
Coils 386 490 105 -
Gene3D 488 590 103 2.1E-25
SUPERFAMILY 495 774 280 1.73E-67
SMART 518 785 268 6.9E-34
ProSiteProfiles 518 785 268 33.474
Pfam 522 773 252 4.0E-42
ProSitePatterns 524 545 22 -
Gene3D 591 794 204 2.0E-48
ProSitePatterns 636 648 13 -
SUPERFAMILY 799 873 75 2.83E-25
ProSiteProfiles 804 875 72 39.002
Gene3D 804 875 72 6.5E-29
Pfam 806 874 69 6.2E-19
SMART 808 871 64 6.4E-30
CDD 809 850 42 3.42193E-25

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function Ubiquitin-protein transferase activity Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Biological process Protein ubiquitination The process in which one or more ubiquitin groups are added to a protein.

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0477000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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