Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0481200.1

Overview

Field Value
Gene ID LotjaGi1g1v0481200
Transcript ID LotjaGi1g1v0481200.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description 1-aminocyclopropane-1-carboxylate synthase; TAIR: AT3G61510.1 ACC synthase 1; Swiss-Prot: sp|Q9MB95|1A11_PRUMU 1-aminocyclopropane-1-carboxylate synthase 1; TrEMBL-Plants: tr|I1N3V1|I1N3V1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0481200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:99411278..99415486) extracted from Lotus japonicus Gifu genome v1.2.

CACGAACACTTATAAATCCCCCCTACATTCTCTCCCATTTCTCCAACAACACCTCCTTGCAAAATTAACCAGAATCCACA ACACAACATATTGCAGATTTTATAACGTGAGTGATAAACACGTCACAAAAAAGAAAGAAACCAAACATGGCTTTGGGGAA CATTAAGAGTACTCACCAGCTTCTCTCCAAGATTGCAACCAACGACAAGCATGGAGAGAATTCTCCTTACTTTGATGGGT GGAAGGCTTATGAAACAAACCCATTTCACCCCACAAAAAATCCTCAGGGTGTTATCCAGATGGGTCTTGCTGAAAATCAG GTATGTATGTTTATAAGCTTGCAATTTTTTCATAAAATGTTTTCCATAATGAGATGCAACTGCATGTTATATATTATGTT GTGTTGATATATAATTTCTTTATTTTTGCAGCTCTCCTTTGATCTGATTGAAGAGTGGATCAGGAACAATCCCAAGGCCT CCATTTGCACTCCTGAAGGAGTAGATAATTTCAGGCACATTGCAAACTTTCAGGACTATCATGGGCTGCCAGAGTTCAGA AATGTAGGTGGAGGAACATAATTTATTCAATTCCCTTACTATCTTAATTATTTTTTAGCATGTTGTGAGAGAGAGAGAGA AAAAACATCTGAATGCCCATTAAAAAGTATGAAATCAGATAAATAATAAATTTTGAGATATTTTATGTTAAAGTAGCACA TTCCTACTTTAACAAAAAGTTGGTCAGAACGTGTTATTTTTTTATTAACATATTTTCTAACGGGTATCCATATGATCTCA TTAACCATATACTTAATAATCAATTACTAATGATGGGTTTGTTATTTTATGCAGGCAGTGGCAAAATTCATGTCAAAAGT GAGAGGAGGTAGGGTGAGATTTGATCCTGACCGTATACTGATGAGTGGAGGAGCCACAGGGGCAAATGAGTTAATCATGT TCTGTTTGGCTGATCCAGGAGATGCTTTTCTAGTTCCCTGCCCTTATTATCCAGCGTATGTGACCTCCCTTTCATCCTCT CATGTTTTCATTCAATGTATGGCCACTATTTCATGCACAAAAACATTCGAAGTAGACAAAAATAAAAGCTACCACAAGTG TAATAACTATTTTGTTTTGATTTAAAGGGAACCAATGATGGCTTCATTATAAAGTGCTTGCAGTATACAGAAATATTCTA GAAAAAAAAAGTACAGTTTCAATGGGTCTTTATAAAAAGTTTCATAGCTAATTTAAATAGCAAATAAGCGGGTATGTGAT TATACCACTTACTATAATTTAATCAAATAATACCTTGCCACAACTATAGTACTATATTTATTTTGTATGTTACTAGAAGT AAAAAAAAAAAGACAAGATACGAGTTTTCAACCTGAAATAAGAACAATCAAGCAGTTTAAGAACTATGGAGAAGTATTTG GAACTATGAAGAAGTATTTTGTGGTATTTGTTAAATATTTTCTAGTTAAATAATATTTTTTAAATTAGTTAAGAAGAGTA GATAAATGGTTCATCCTTCACCACCTAGAGCTTGGGAGGTGTCACCCTTTCATACAAGAATTTATCAAATTTGCTTCTAA ATTTGAGTGGCACAACACCTAACAGGATTCAAACTGAAAGATTCATACATCATTTGATTCAATAAGTGAGGTCAAGTTTT GAAAATAAAATAAATAAGTGTCATAAAATTGAAATTGGACAGTTCTCATAATAATAATGGACATTAATTCACTTTTTTGA CACATTTTAAACATATTATTTTGTGTGCTTTTTAATCACCTTAAAGTATTGAGGGGTTAAAAACCGCAACAAATACGTAC ATCAGATAAATGTTTACCAACATATATATAAGTATATGTCTAACCATCATTACTTCAATTTTTAAAGTGGATCATATAAA GAATTAGTTCAATCATGAAACATGTTTTTATAATTAACATTTAGTCTTTTTAACTTGAATAAAAAAACCTTTTATTAACT TGTGAATCATTTTGCTGACCAAAAAAAAAAACTTGTGAATGTTTTTTCTGGGTAGACAAAACTCCTAAATAGGTTTTTAT AATAGAAAATGTCTTACTTATATCCCTTAAACTCTTATCATTTAAGTTAATCCTCTGAACTCCTGTTCTAGCTAATCTGC CAGGCTGCTAGTGTCAGCTGGTTAATCAATAAAGCATGTGTTACCCATATTTAAATCCAAATTAAATCATATAATTGCGT GGACACTTGCCTTTGACCTTTGAAAGCAAATATCACACACGCAACACTGCATATGCGTTGAAATTTTGCACAGTCACAGA CCTTTACACAAAGCAATTTCAACTTAACTTTGTTCAAGAATTTCCATGGCATATTCTATTGGCCAACATGAGATCTCAAA GAACAGCACCTTGTCTTTAGAATACCTAGCATCACCAATTAATCACAATTCTTTATAATTCCAATAGACTATTGTCTGAA AATTTGAGCATATGTGATGTTTCTCAACTTTTACCAATACGTTGAAAAATCTCTAGTCAACTTCAAATCTTTGTCTGACC TTGAGGACCACAAAGTTGTGTGAATAGTCACTGTAATCTGTCCAAGAAAATATTTGAATGGTAATTAACTCATATTTTGA CTATTTGAAGAAGTAGCAAAGTTAATAAATATCACTTACCAAAATCATGTGTCTACTAATACAAGAATCAACCAAGAACA TGTTTCATTTGACTCATAGTTATGCTTCTTATAAATCATGAAATGTGATATTTAGAAATAATTTACAAATAAAGCTTTTA ATTTGTGAACTAAATTTTTCTTGATCACGCGCGGATGAACACTAAATTTTTTTCTTTTACAGATTCGTGCGTGACTTGTG CTGGAGAACCGGAGTGCAACTAATTCCTGTCCAATGTGACAGCTCCAACAACTTCATGATAACAAGAGAAGCTCTTGAAG CAGCATATAACAAAGCAAAAGCCCACAACATCAATGTGAAGGGTTTGCTCATCACAAACCCTTCAAATCCTCTTGGAACC ACGGTGGACCGCGAAACACTGAAGAGCATCGTGCGCTTCATCAATGAAAAGAACATCCATTTTGTATGCGATGAAATCTA CGCGGCCACAGTTTTCAACACTCCAACCTTTGTGAGTGTCGCCGAAGTAATCCAAGAAATCGAGCATTGCAAACGCAATC TCATTCACATTATCTATAGTTTATCCAAAGACATGGGGCTTCCAGGTTTTAGAGTTGGATTGGTTTATTCATACAATGAT GAAGTAGTGAACTGTGGAAGAAAAATGTCTAGCTTTGGATTAGTGTCATCACAGACACAGCATTTTTTGGCTGCGATGCT TGCAGATGAGGAGTTTGTGGAAAGGTTTCTTAAAGAAAGCGCGAAGAGGCTGAGGCTGAGGCATGAGTACTTCACGAAAG GGCTTGAGAAGGTGAACATTACTTGCTTGCCAAGCAACGCGGGGCTTTTCTGCTGGATGAATCTGAGGGGTTTGCTGAAG AAACACACGTTTGAAGGCGAGATGGTGTTGTGGCGCATGATTGTGAATGAGGTGAAGCTCAATGTTTCACCGGGGTCGGC TTTTAACTGCTCTGAGCCTGGTTGGTTCAGGGTTTGCTTTGCGAACATGGATCATGAAACTGTGGAGGTTGCGCTCAAGA GGATAAGAGCGTTTGTCGGGAAAGAAATTGGGGTGGAACGCAAACGTTGGAAGAGCAACCTTAGGCTCAGTTTCTCAACA AGGAGATTTGATGAGACTGTTATCATGTCTCCTCACATGATGTCTCCTCATTCACCTCTTGTCAGAGCAACCACTTAATT GGATCAGATCAGCAACCCCTAGTATTGAATCTTGTCTTACTTCAGGTGTTAATTATATAGATGCTTTGTGTTTCCAATTA ATTTAGCTATGATTTTTTTAATTACCAATCAATGTAGATTGTGAATGCATACATCATTTATGTAATCATAGGAGTGAATA ACATGTTTTACATTTGTGTGTTGTTGTCTGAGTATGTGGACAGCTAACCCTGTTGTAGTTAGGTAACCAACATGGTTTGA TCAGTTCAAGTGATATATATTATGATTGTGAAAGATGTTCCCCTATTCAATTGTAGGATGTAAAATTGTTTGGTTCCTTA AGCTTTGTGTTTGAATTTGAAAAACAAGAGTTTGGAGTTTTACTCACTT
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0481200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTTTGGGGAACATTAAGAGTACTCACCAGCTTCTCTCCAAGATTGCAACCAACGACAAGCATGGAGAGAATTCTCC TTACTTTGATGGGTGGAAGGCTTATGAAACAAACCCATTTCACCCCACAAAAAATCCTCAGGGTGTTATCCAGATGGGTC TTGCTGAAAATCAGCTCTCCTTTGATCTGATTGAAGAGTGGATCAGGAACAATCCCAAGGCCTCCATTTGCACTCCTGAA GGAGTAGATAATTTCAGGCACATTGCAAACTTTCAGGACTATCATGGGCTGCCAGAGTTCAGAAATGCAGTGGCAAAATT CATGTCAAAAGTGAGAGGAGGTAGGGTGAGATTTGATCCTGACCGTATACTGATGAGTGGAGGAGCCACAGGGGCAAATG AGTTAATCATGTTCTGTTTGGCTGATCCAGGAGATGCTTTTCTAGTTCCCTGCCCTTATTATCCAGCATTCGTGCGTGAC TTGTGCTGGAGAACCGGAGTGCAACTAATTCCTGTCCAATGTGACAGCTCCAACAACTTCATGATAACAAGAGAAGCTCT TGAAGCAGCATATAACAAAGCAAAAGCCCACAACATCAATGTGAAGGGTTTGCTCATCACAAACCCTTCAAATCCTCTTG GAACCACGGTGGACCGCGAAACACTGAAGAGCATCGTGCGCTTCATCAATGAAAAGAACATCCATTTTGTATGCGATGAA ATCTACGCGGCCACAGTTTTCAACACTCCAACCTTTGTGAGTGTCGCCGAAGTAATCCAAGAAATCGAGCATTGCAAACG CAATCTCATTCACATTATCTATAGTTTATCCAAAGACATGGGGCTTCCAGGTTTTAGAGTTGGATTGGTTTATTCATACA ATGATGAAGTAGTGAACTGTGGAAGAAAAATGTCTAGCTTTGGATTAGTGTCATCACAGACACAGCATTTTTTGGCTGCG ATGCTTGCAGATGAGGAGTTTGTGGAAAGGTTTCTTAAAGAAAGCGCGAAGAGGCTGAGGCTGAGGCATGAGTACTTCAC GAAAGGGCTTGAGAAGGTGAACATTACTTGCTTGCCAAGCAACGCGGGGCTTTTCTGCTGGATGAATCTGAGGGGTTTGC TGAAGAAACACACGTTTGAAGGCGAGATGGTGTTGTGGCGCATGATTGTGAATGAGGTGAAGCTCAATGTTTCACCGGGG TCGGCTTTTAACTGCTCTGAGCCTGGTTGGTTCAGGGTTTGCTTTGCGAACATGGATCATGAAACTGTGGAGGTTGCGCT CAAGAGGATAAGAGCGTTTGTCGGGAAAGAAATTGGGGTGGAACGCAAACGTTGGAAGAGCAACCTTAGGCTCAGTTTCT CAACAAGGAGATTTGATGAGACTGTTATCATGTCTCCTCACATGATGTCTCCTCATTCACCTCTTGTCAGAGCAACCACT TAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0481200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MALGNIKSTHQLLSKIATNDKHGENSPYFDGWKAYETNPFHPTKNPQGVIQMGLAENQLSFDLIEEWIRNNPKASICTPE GVDNFRHIANFQDYHGLPEFRNAVAKFMSKVRGGRVRFDPDRILMSGGATGANELIMFCLADPGDAFLVPCPYYPAFVRD LCWRTGVQLIPVQCDSSNNFMITREALEAAYNKAKAHNINVKGLLITNPSNPLGTTVDRETLKSIVRFINEKNIHFVCDE IYAATVFNTPTFVSVAEVIQEIEHCKRNLIHIIYSLSKDMGLPGFRVGLVYSYNDEVVNCGRKMSSFGLVSSQTQHFLAA MLADEEFVERFLKESAKRLRLRHEYFTKGLEKVNITCLPSNAGLFCWMNLRGLLKKHTFEGEMVLWRMIVNEVKLNVSPG SAFNCSEPGWFRVCFANMDHETVEVALKRIRAFVGKEIGVERKRWKSNLRLSFSTRRFDETVIMSPHMMSPHSPLVRATT
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43795
8 466 459 3.3E-297 –
PANTHER
PTHR43795:SF58
8 466 459 3.3E-297 –
SUPERFAMILY
SSF53383
18 435 418 1.99E-111
IPR015424
Gene3D
G3DSA:3.90.1150.10
38 429 392 5.2E-148
IPR015422
Pfam
PF00155
50 430 381 4.6E-103
IPR004839
PRINTS
PR00753
52 78 27 1.0E-106 –
Gene3D
G3DSA:3.40.640.10
72 324 253 5.2E-148
IPR015421
PRINTS
PR00753
85 101 17 1.0E-106 –
CDD
cd00609
90 432 343 2.98802E-63 –
PRINTS
PR00753
122 142 21 1.0E-106 –
PRINTS
PR00753
144 165 22 1.0E-106 –
PRINTS
PR00753
198 222 25 1.0E-106 –
PRINTS
PR00753
234 257 24 1.0E-106 –
PRINTS
PR00753
269 293 25 1.0E-106 –
ProSitePatterns
PS00105
275 288 14 -
IPR004838
PRINTS
PR00753
301 324 24 1.0E-106 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0009058
Biological process Biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
Subterm of
GO:0030170
Molecular function Pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0481200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…