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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0525900 |
| Transcript ID | LotjaGi1g1v0525900.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0525900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:105269248..105271938) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTGCGCTAACAAACTCACGAAACTGCTCTCTTTCTCCCTCAAGTGATCACCGTCTCCCCTGTTTGTCTCTTGCTCCC TGCGTTCTTTTAGTGTAAGATCTGTTCCTTATTTTTGTTCTGTGTTATTCTTTTATGTTATCATTGTTTTCATGAACGAA ACATAATTTTTAGCTTTAGGGTGAACTCACATGAACGTTCTTTTGTGCAAACAATGCACAGGCCATACTACATTCTAAGA TTAATACCTAAGATGAGTTGTTTAACACTTAGGATAACAAATCGAGTTTATTAAATGGTTTTAAATTCGGTGCATAATTA ATTCCATCAAAGAAATATTCAGCTAAATCTGATTCTAATGTGACACATAAAGTTGAGCTTTACACCATTCATTATTCCCA TGCATCAACTTGTTCCTTTGATTGTTAGATTGAAAGAATGGGCAAAAGGGATGAGGGATGTGCCATAGGAATCGACCTTG GAACCACCTACTCGTGTGTTGCAGTTTGGAATGATCAACAACGCAGAGTGGACATCATTCACAATGAACAAGGCAACCCA ATTACTCCATCCTATGTTGCTTTCACAGATGATCAAATGTTAATTGGTTTAGCTGCTAAGAATCAGGCTGCTACAAACCC TGAGAACACTGTTTTTGGTAAAATTTTCAACTGTTTTTTTTACTAGCCTGCTGACAAATGATAAATAGTTGAGAATTTGT TATTATTGACGCAGATGCTAAGAGGTTGATTGGTAGGAAGTACAGTGATCCCATTATAAAAAATGATATGATGTTATGGC CATTCAAGGTTATTGCGGGTGTTGATGACAAACCCATGATTGTTGTTAAGTATCACGGTAAGGAGAAGCATCTTTTTGCT GAAGAAATATCATCCATGGTTCTCACAAAGATGCGCGAAATTGCGGAGGCATATCTGGAGTCACCGGTTAAGAATGCAGT TATCACTGTACCTGCTTATTTCAATGACTCTCAGCGCAAAGCTACCATAGATGCGGGTACCATTGCTGGTCTCAATGTTA AGCGGATAATCAATGAACCCACAGCTGCAGCTATTGCGTATGGCCTTGACAAGAGAAATGATTGTAAGAAACCGCGAAAT ATATTCATCTTTGACCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTTACAATTGAAGGTAAGGACTTCAAAGTTAAAGC CACTGCAGGAAATACTCACTTAGGAGGAGAGGATTTCGATAATAGAATGGTGAACTACTTTGTAGAGGAGTTCAAAAGGA AGAGCAAATTGGATATTAGTGGAAATCCTAAAGCCCTGAGGAGGTTGAGAACTGCTTGCGAGAGGGCGAAAAGGACACTC TCATGGACTACATGTACCACAGTTGAGGTAGATTCTTTATTTCAGGGCATTGATTTATGTTCCTCTATCACTCGTGCAAG GTTTGAGGAACTTAACATTGACATGTTTAGAGAATGTATAGAGACAGTGGATAAGTGCCTCAATGATGCTAAGATGGACC AGAGTAGTGTAGATGATGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCGAAAGTGCAGGAGTTATTGGAGGAATTTTTC AAGGGGAAGAGTCTGTGCAAGAGTATCAATCCTGACGAGGCCGTTGCTTACGGTGCAGCTGTCCAGGCTGCTTTGTTGAG CAAAGGCATTAAGAATGTGCCTGACTTGGTGCTCTATGATGTTACACCGCTGTCTCTTGGTATTTGGATAAAAGGAGCTA TCATGAGTGTGGTGATTCCAAGGAATACTACTATTCCTGTAAAGAAGACACACGGTTACAAGACAAGTGCAGATAACCAA TCCAGTGTCCGGATTAAGGTTTATGAGGGTGAGAGAGCTAGAGCAAGTGATAACAATTTGCTCGGTTCCTTTGATCTTTC TGGCCTCCCTCCTGCTCCTCGTGGCCATCCTTTTGATGTATGCTTTGCTATAGATGAAAATGGCATTCTATGTGTTTCCG CTAAGGAAAAAACCACTGGCAGTAAGAATGAGATCACCATAACCAATGACAAAGGGAGGCTGTCGACCCAAGAAATTAAG AGATTGGTTCAAGAAGCTGAGAGTTTCCAGGCTGAAGACAAGCAATTCCTTAGGAAGGCCAATGCAATGAATTCTTTGGA TGATTACATTTACAAGATGAAGAAAGCCTTGAAGAATGATTGTATTAATTTAAAGCTTACATCAGCAGAAAAGGAGAAGA TCAGTTCTGCAATTACAAAGGCTACAAGTTTGCTTGATGGTGGTAATAATAAGGCATATGAAATACAGGTGCTTGAGGAT TATGTAAAGGAGCTTGAGATCATGTTTAAGCCCATTATAGCCAAGATTGACTTGTTCTCTTCATTTTATTAGAGCTTTGC TTGTACTGACTAGTCATTTTGTCTATGATAACAAATACTTTTATTATAATATTATTAGGAATTAGTTTTAGTTTATATAA ATATTTAGTGGACATGTTTAAATGGTTGACTTAGACATTCAACAATGTTTTATGAATTTGCTTGTGCTGACAGTATTTGG CCCTCTGCCATAAACAATCCTTAGCTTCAAGTCAATCATTTTTATGCTATGAAAATACATGACAGTGGAAAATGATGGAT AGTAGATGATATTATGAAATGTTAATGGAGAAAATAGCATTTGGGTACCAA
CDS sequence (LotjaGi1g1v0525900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCAAAAGGGATGAGGGATGTGCCATAGGAATCGACCTTGGAACCACCTACTCGTGTGTTGCAGTTTGGAATGATCA ACAACGCAGAGTGGACATCATTCACAATGAACAAGGCAACCCAATTACTCCATCCTATGTTGCTTTCACAGATGATCAAA TGTTAATTGGTTTAGCTGCTAAGAATCAGGCTGCTACAAACCCTGAGAACACTGTTTTTGATGCTAAGAGGTTGATTGGT AGGAAGTACAGTGATCCCATTATAAAAAATGATATGATGTTATGGCCATTCAAGGTTATTGCGGGTGTTGATGACAAACC CATGATTGTTGTTAAGTATCACGGTAAGGAGAAGCATCTTTTTGCTGAAGAAATATCATCCATGGTTCTCACAAAGATGC GCGAAATTGCGGAGGCATATCTGGAGTCACCGGTTAAGAATGCAGTTATCACTGTACCTGCTTATTTCAATGACTCTCAG CGCAAAGCTACCATAGATGCGGGTACCATTGCTGGTCTCAATGTTAAGCGGATAATCAATGAACCCACAGCTGCAGCTAT TGCGTATGGCCTTGACAAGAGAAATGATTGTAAGAAACCGCGAAATATATTCATCTTTGACCTTGGTGGTGGTACTTTTG ATGTGTCTCTCCTTACAATTGAAGGTAAGGACTTCAAAGTTAAAGCCACTGCAGGAAATACTCACTTAGGAGGAGAGGAT TTCGATAATAGAATGGTGAACTACTTTGTAGAGGAGTTCAAAAGGAAGAGCAAATTGGATATTAGTGGAAATCCTAAAGC CCTGAGGAGGTTGAGAACTGCTTGCGAGAGGGCGAAAAGGACACTCTCATGGACTACATGTACCACAGTTGAGGTAGATT CTTTATTTCAGGGCATTGATTTATGTTCCTCTATCACTCGTGCAAGGTTTGAGGAACTTAACATTGACATGTTTAGAGAA TGTATAGAGACAGTGGATAAGTGCCTCAATGATGCTAAGATGGACCAGAGTAGTGTAGATGATGTTGTCCTTGTTGGTGG ATCTTCTAGGATTCCGAAAGTGCAGGAGTTATTGGAGGAATTTTTCAAGGGGAAGAGTCTGTGCAAGAGTATCAATCCTG ACGAGGCCGTTGCTTACGGTGCAGCTGTCCAGGCTGCTTTGTTGAGCAAAGGCATTAAGAATGTGCCTGACTTGGTGCTC TATGATGTTACACCGCTGTCTCTTGGTATTTGGATAAAAGGAGCTATCATGAGTGTGGTGATTCCAAGGAATACTACTAT TCCTGTAAAGAAGACACACGGTTACAAGACAAGTGCAGATAACCAATCCAGTGTCCGGATTAAGGTTTATGAGGGTGAGA GAGCTAGAGCAAGTGATAACAATTTGCTCGGTTCCTTTGATCTTTCTGGCCTCCCTCCTGCTCCTCGTGGCCATCCTTTT GATGTATGCTTTGCTATAGATGAAAATGGCATTCTATGTGTTTCCGCTAAGGAAAAAACCACTGGCAGTAAGAATGAGAT CACCATAACCAATGACAAAGGGAGGCTGTCGACCCAAGAAATTAAGAGATTGGTTCAAGAAGCTGAGAGTTTCCAGGCTG AAGACAAGCAATTCCTTAGGAAGGCCAATGCAATGAATTCTTTGGATGATTACATTTACAAGATGAAGAAAGCCTTGAAG AATGATTGTATTAATTTAAAGCTTACATCAGCAGAAAAGGAGAAGATCAGTTCTGCAATTACAAAGGCTACAAGTTTGCT TGATGGTGGTAATAATAAGGCATATGAAATACAGGTGCTTGAGGATTATGTAAAGGAGCTTGAGATCATGTTTAAGCCCA TTATAGCCAAGATTGACTTGTTCTCTTCATTTTATTAG
Protein sequence (LotjaGi1g1v0525900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKRDEGCAIGIDLGTTYSCVAVWNDQQRRVDIIHNEQGNPITPSYVAFTDDQMLIGLAAKNQAATNPENTVFDAKRLIG RKYSDPIIKNDMMLWPFKVIAGVDDKPMIVVKYHGKEKHLFAEEISSMVLTKMREIAEAYLESPVKNAVITVPAYFNDSQ RKATIDAGTIAGLNVKRIINEPTAAAIAYGLDKRNDCKKPRNIFIFDLGGGTFDVSLLTIEGKDFKVKATAGNTHLGGED FDNRMVNYFVEEFKRKSKLDISGNPKALRRLRTACERAKRTLSWTTCTTVEVDSLFQGIDLCSSITRARFEELNIDMFRE CIETVDKCLNDAKMDQSSVDDVVLVGGSSRIPKVQELLEEFFKGKSLCKSINPDEAVAYGAAVQAALLSKGIKNVPDLVL YDVTPLSLGIWIKGAIMSVVIPRNTTIPVKKTHGYKTSADNQSSVRIKVYEGERARASDNNLLGSFDLSGLPPAPRGHPF DVCFAIDENGILCVSAKEKTTGSKNEITITNDKGRLSTQEIKRLVQEAESFQAEDKQFLRKANAMNSLDDYIYKMKKALK NDCINLKLTSAEKEKISSAITKATSLLDGGNNKAYEIQVLEDYVKELEIMFKPIIAKIDLFSSFY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 618 | 613 | 4.5E-296 | – | |
| PANTHER | 6 | 618 | 613 | 4.5E-296 | ||
| SUPERFAMILY | 8 | 193 | 186 | 2.72E-66 | ||
| PRINTS | 8 | 21 | 14 | 7.9E-68 | – | |
| Pfam | 9 | 598 | 590 | 1.4E-224 | ||
| Gene3D | 10 | 386 | 377 | 2.4E-161 | – | |
| ProSitePatterns | 12 | 19 | 8 | - | ||
| PRINTS | 38 | 50 | 13 | 7.9E-68 | – | |
| PRINTS | 60 | 68 | 9 | 7.9E-68 | – | |
| Gene3D | 73 | 120 | 48 | 2.4E-161 | – | |
| PRINTS | 148 | 168 | 21 | 7.9E-68 | – | |
| Gene3D | 194 | 373 | 180 | 2.4E-161 | – | |
| SUPERFAMILY | 200 | 388 | 189 | 7.26E-62 | ||
| ProSitePatterns | 205 | 218 | 14 | - | ||
| PRINTS | 211 | 221 | 11 | 7.9E-68 | – | |
| Gene3D | 237 | 314 | 78 | 2.4E-161 | – | |
| PRINTS | 339 | 355 | 17 | 7.9E-68 | – | |
| ProSitePatterns | 342 | 356 | 15 | - | ||
| PRINTS | 371 | 391 | 21 | 7.9E-68 | – | |
| Gene3D | 389 | 515 | 127 | 2.2E-51 | ||
| SUPERFAMILY | 394 | 549 | 156 | 9.42E-52 | ||
| PRINTS | 397 | 416 | 20 | 7.9E-68 | – | |
| PRINTS | 477 | 493 | 17 | 7.9E-68 | – | |
| Gene3D | 516 | 619 | 104 | 7.9E-22 | ||
| SUPERFAMILY | 544 | 618 | 75 | 6.54E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0525900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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