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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0538500 |
| Transcript ID | LotjaGi1g1v0538500.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 70 kDa heat shock protein; TAIR: AT5G02500.1 heat shock cognate protein 70-1; Swiss-Prot: sp|P22953|MD37E_ARATH Probable mediator of RNA polymerase II transcription subunit 37e; TrEMBL-Plants: tr|A0A0B2R5Y0|A0A0B2R5Y0_GLYSO Heat shock cognate 70 kDa protein 2; Found in the gene: LotjaGi1g1v0538500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:106707592..106710730) extracted from Lotus japonicus Gifu genome v1.2.
GAAGAAACCAGAAGCCCCAAAATCTGAACCAAATCACAAAAATTCCACGGAAGCGCGGGAACAGAACCTTCTAGAATCAA AAAATCACCACCTATATAAACCCACACAAACCCCCTTTGCTCTCTCATTCTTAACCTAACCATTCTTTCACTCTTCTCTG TTCTCTCTTCTTCGCCGCAACGCAACAACCCTAGCAACGTTCTCAGATCACGATGGCCGCGAAAGGAGATGGTCCCGCTA TCGGAATCGACCTCGGCACCACCTACTCCTGCGTCGGAGTATGGCAGCACGACCGTGTCGAAATCATCGCCAACGACCAG GGTAACCGTACCACCCCCTCTTACGTCGGTTTCACTGATTCCGAGCGTTTGATCGGTGATGCTGCTAAGAATCAAGTCGC CATGAACCCTGTCAACACCGTCTCCGGTAACTTCCTCATCCCTGTGTCAATTGTGCATAGGTTTCTAGCTTGTTATTTCA ACTATTCATAATTTGGGGTTAGGGTTAGGGTTTCTGTTAGTTGCTGCTTTTACTAGTACTACATGATATGCTAGATTGGA ACTTGCTTTGTTGTTGTGGTTATTGATTGTTTGAGGTGAGATTGCTGATTGGTGAATTGGATGTTTGATTGTAGATGCCA AGAGGTTGATTGGAAAGAGATTCTCTGACGCTTCTGTTCAGAGTGACATGAAGCTATGGCCATTCAAGGTTACTGCTGGA CCTGCTGACAAGCCCATGATTGGTGTCACCTACAAGGGTGAGGAGAAGCAGTTTTCTGCTGAGGAGATCTCCTCCATGGT CCTCATTAAGATGCGTGAGATTGCCGAGGCTTATCTCGGTTCCACCGTGAAGAATGCTGTTGTTACTGTGCCAGCTTACT TCAATGACTCCCAGCGCCAGGCTACTAAGGATGCTGGTGTCATTGCTGGACTCAATGTCATGCGTATCATCAATGAACCC ACTGCTGCTGCAATTGCTTATGGTCTTGACAAGAAGGCAACCAGTGTTGGTGAGAAGAATGTTTTGATTTTTGACCTTGG TGGTGGTACTTTTGATGTCTCTCTTCTTACTATTGAAGAGGGTATTTTTGAGGTTAAGGCCACTGCTGGAGACACCCATC TTGGAGGTGAAGATTTTGATAATAGGATGGTGAACCATTTTGTTCAGGAGTTCAAGAGGAAGAACAAGAAGGACATTAGT GGGAACCCCAGGGCTTTGAGAAGGTTGAGAACCGCATGTGAAAGGGCTAAGAGGACTCTCTCATCCACTGCACAGACCAC AATTGAAATTGACTCCTTGTATGAAGGTGTTGATTTTTACACCACAATCACCCGTGCTAGATTTGAGGAGCTCAACATGG ACCTCTTCAGGAAGTGTATGGAGCCAGTTGAGAAGTGTTTGAGGGATGCAAAGATGGACAAGAACAGTGTCCATGATGTT GTTCTTGTTGGTGGGTCTACTAGGATCCCCAAGGTGCAGTCTCTATTGCAGGATTTCTTCAACGGGAAGGAGCTTTGCAA GAGCATCAACCCTGATGAGGCTGTTGCTTATGGAGCTGCTGTTCAGGCTGCTATCTTGAGTGGTGAGGGTAATGAGAAGG TTCAGGATCTTCTGTTGTTGGATGTTACTCCCCTTTCCCTGGGTTTGGAAACTGCCGGTGGTGTCATGACTGTTCTCATT CCAAGGAACACAACAATCCCAACCAAGAAGGAGCAAGTTTTCTCAACTTACTCGGACAACCAACCTGGTGTCTTGATCCA GGTGTACGAGGGTGAAAGAGCCAGAACCAGAGATAACAACTTGTTGGGTAAATTTGAGCTTTCCGGTATTCCTCCAGCTC CAAGGGGAGTTCCTCAGATCACTGTTTGCTTTGACATTGATGCGAACGGTATCTTGAATGTCTCTGCTGAGGACAAGACT ACAGGGCAGAAGAACAAGATCACTATCACCAACGACAAGGGCAGGCTTTCAAAGGAGGAGATCGAAAAGATGGTGCAGGA GGCAGAGAAGTACAAGGCTGAGGATGAGGAACATAAGAAGAAGGTTGATGCTAAGAACGCCTTGGAAAACTATGCCTACA ACATGAGGAACACTATCAAGGATGAAAAGATTGGGTCTAAGCTTTCTTCTGATGATAAGAAGAAGATTGAAGATGCAATT GACCAAGCAATCCAATGGTTGGAGAGCAATCAGCTGGCTGAGGCTGACGAGTTTGAAGACAAGATGAAGGAGCTTGAGGG CCTTTGCAACCCAATCATTGCCAAGATGTACCAGGATGGAGGTGTTCCTGACATGGCTGGTGGAATGGAAGAAGATGTGC CACCATCTGCAGCCGGTGGTGCTGGCCCTAAGATCGAAGAAGTCGATTAAACTATGTTGATGTATGAACCATTTAATTTC AGAACTTTTTTAGCTTTTTTTATTTATCTTGTTAAGAATATTGCCAAAATTTTGAGGTCTTTCTGATATTGGCTGGCTTA TTCATGATTGTCAAAGCCGCTTCCTCTCTTTTTGCTTTTGGATACTTTATGCAGATTTGAAGTGTCTGAATTTTTTTGGG AATGGAAGCAATTATAATTGCCAATGCGAAATTGTCTTTGCAAAAATCCTTTTTGGTTTAGGTTTCATGGTTTTATCTAT TCGATCGTAGGTTCTTTTTGTTCTGGCTTACTATCATAAACAAGTCATTTTCAGAGAAAAATCTATTTACTGTCCTTATA ATTTGTTTAAGCTTTAGTTTATTTCGTAACTTTCATTGCTTTGGGTAAATTTTAATACAGGTAATGCTTATTATAGAAGC ATTTAGCATCAGATAATTTTGAGCTAAAAATAGTTAGTAAGTCATTGTTATTTATATAAGCTTTTTCAAATACCTGTATA AATGTTTATGTTCTAAGGTCAAATTCACTCTTTAGAATAGGGGTCTCATTCCAAATTCCTCGGCCTGCTGACTTTATTTG AAAACAGAGCAGACTTCAGTATACATAGCTCCACATAAAATTGACTTTATTATGATCTTGTTTTTTTGAAAAAAAACACT GATTCTAAATATCACTTAGAGAAAGTCGGCTGCAAAACTACTCTATCAATATCAAGAATAAGAAGACTATAAACAATTAG ACTGCTTCAACTTTTCTCC
CDS sequence (LotjaGi1g1v0538500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGCGAAAGGAGATGGTCCCGCTATCGGAATCGACCTCGGCACCACCTACTCCTGCGTCGGAGTATGGCAGCACGA CCGTGTCGAAATCATCGCCAACGACCAGGGTAACCGTACCACCCCCTCTTACGTCGGTTTCACTGATTCCGAGCGTTTGA TCGGTGATGCTGCTAAGAATCAAGTCGCCATGAACCCTGTCAACACCGTCTCCGATGCCAAGAGGTTGATTGGAAAGAGA TTCTCTGACGCTTCTGTTCAGAGTGACATGAAGCTATGGCCATTCAAGGTTACTGCTGGACCTGCTGACAAGCCCATGAT TGGTGTCACCTACAAGGGTGAGGAGAAGCAGTTTTCTGCTGAGGAGATCTCCTCCATGGTCCTCATTAAGATGCGTGAGA TTGCCGAGGCTTATCTCGGTTCCACCGTGAAGAATGCTGTTGTTACTGTGCCAGCTTACTTCAATGACTCCCAGCGCCAG GCTACTAAGGATGCTGGTGTCATTGCTGGACTCAATGTCATGCGTATCATCAATGAACCCACTGCTGCTGCAATTGCTTA TGGTCTTGACAAGAAGGCAACCAGTGTTGGTGAGAAGAATGTTTTGATTTTTGACCTTGGTGGTGGTACTTTTGATGTCT CTCTTCTTACTATTGAAGAGGGTATTTTTGAGGTTAAGGCCACTGCTGGAGACACCCATCTTGGAGGTGAAGATTTTGAT AATAGGATGGTGAACCATTTTGTTCAGGAGTTCAAGAGGAAGAACAAGAAGGACATTAGTGGGAACCCCAGGGCTTTGAG AAGGTTGAGAACCGCATGTGAAAGGGCTAAGAGGACTCTCTCATCCACTGCACAGACCACAATTGAAATTGACTCCTTGT ATGAAGGTGTTGATTTTTACACCACAATCACCCGTGCTAGATTTGAGGAGCTCAACATGGACCTCTTCAGGAAGTGTATG GAGCCAGTTGAGAAGTGTTTGAGGGATGCAAAGATGGACAAGAACAGTGTCCATGATGTTGTTCTTGTTGGTGGGTCTAC TAGGATCCCCAAGGTGCAGTCTCTATTGCAGGATTTCTTCAACGGGAAGGAGCTTTGCAAGAGCATCAACCCTGATGAGG CTGTTGCTTATGGAGCTGCTGTTCAGGCTGCTATCTTGAGTGGTGAGGGTAATGAGAAGGTTCAGGATCTTCTGTTGTTG GATGTTACTCCCCTTTCCCTGGGTTTGGAAACTGCCGGTGGTGTCATGACTGTTCTCATTCCAAGGAACACAACAATCCC AACCAAGAAGGAGCAAGTTTTCTCAACTTACTCGGACAACCAACCTGGTGTCTTGATCCAGGTGTACGAGGGTGAAAGAG CCAGAACCAGAGATAACAACTTGTTGGGTAAATTTGAGCTTTCCGGTATTCCTCCAGCTCCAAGGGGAGTTCCTCAGATC ACTGTTTGCTTTGACATTGATGCGAACGGTATCTTGAATGTCTCTGCTGAGGACAAGACTACAGGGCAGAAGAACAAGAT CACTATCACCAACGACAAGGGCAGGCTTTCAAAGGAGGAGATCGAAAAGATGGTGCAGGAGGCAGAGAAGTACAAGGCTG AGGATGAGGAACATAAGAAGAAGGTTGATGCTAAGAACGCCTTGGAAAACTATGCCTACAACATGAGGAACACTATCAAG GATGAAAAGATTGGGTCTAAGCTTTCTTCTGATGATAAGAAGAAGATTGAAGATGCAATTGACCAAGCAATCCAATGGTT GGAGAGCAATCAGCTGGCTGAGGCTGACGAGTTTGAAGACAAGATGAAGGAGCTTGAGGGCCTTTGCAACCCAATCATTG CCAAGATGTACCAGGATGGAGGTGTTCCTGACATGGCTGGTGGAATGGAAGAAGATGTGCCACCATCTGCAGCCGGTGGT GCTGGCCCTAAGATCGAAGAAGTCGATTAA
Protein sequence (LotjaGi1g1v0538500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPVNTVSDAKRLIGKR FSDASVQSDMKLWPFKVTAGPADKPMIGVTYKGEEKQFSAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQ ATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD NRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFRKCM EPVEKCLRDAKMDKNSVHDVVLVGGSTRIPKVQSLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLL DVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQI TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIK DEKIGSKLSSDDKKKIEDAIDQAIQWLESNQLAEADEFEDKMKELEGLCNPIIAKMYQDGGVPDMAGGMEEDVPPSAAGG AGPKIEEVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 628 | 625 | 0.0 | ||
| PANTHER | 4 | 628 | 625 | 0.0 | – | |
| SUPERFAMILY | 8 | 191 | 184 | 1.37E-68 | ||
| PRINTS | 8 | 21 | 14 | 4.4E-87 | – | |
| Pfam | 9 | 618 | 610 | 3.2E-261 | ||
| CDD | 9 | 387 | 379 | 0.0 | – | |
| Gene3D | 10 | 384 | 375 | 1.1E-175 | – | |
| ProSitePatterns | 12 | 19 | 8 | - | ||
| PRINTS | 36 | 48 | 13 | 4.4E-87 | – | |
| PRINTS | 58 | 66 | 9 | 4.4E-87 | – | |
| Gene3D | 71 | 118 | 48 | 1.1E-175 | – | |
| PRINTS | 146 | 166 | 21 | 4.4E-87 | – | |
| Gene3D | 192 | 371 | 180 | 1.1E-175 | – | |
| SUPERFAMILY | 198 | 388 | 191 | 2.1E-69 | ||
| ProSitePatterns | 203 | 216 | 14 | - | ||
| PRINTS | 209 | 219 | 11 | 4.4E-87 | – | |
| Gene3D | 235 | 312 | 78 | 1.1E-175 | – | |
| PRINTS | 337 | 353 | 17 | 4.4E-87 | – | |
| ProSitePatterns | 340 | 354 | 15 | - | ||
| PRINTS | 369 | 389 | 21 | 4.4E-87 | – | |
| Gene3D | 387 | 515 | 129 | 2.0E-64 | ||
| SUPERFAMILY | 392 | 549 | 158 | 2.22E-65 | ||
| PRINTS | 396 | 415 | 20 | 4.4E-87 | – | |
| PRINTS | 477 | 493 | 17 | 4.4E-87 | – | |
| Gene3D | 516 | 619 | 104 | 4.1E-40 | ||
| Coils | 518 | 541 | 24 | - | – | |
| SUPERFAMILY | 543 | 624 | 82 | 3.92E-31 | ||
| Coils | 588 | 608 | 21 | - | – | |
| MobiDBLite | 623 | 649 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0538500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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