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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0600400 |
| Transcript ID | LotjaGi1g1v0600400.15 |
| Related isoforms 14 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Elongation factor G; TAIR: AT1G45332.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp|Q9C641|EFGM1_ARATH Elongation factor G-1, mitochondrial; TrEMBL-Plants: tr|A0A151SGJ9|A0A151SGJ9_CAJCA Elongation factor G, mitochondrial; Found in the gene: LotjaGi1g1v0600400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:114500218..114503592) extracted from Lotus japonicus Gifu genome v1.2.
ATGACTTCTATGAATGTTCCTGAGCCCGTGATGTCCTTAGCTGTACAGCCAGTCTCAAAAGATTCTGGAGGGCAAGTGAG TAGTTTCTTTTGTGTAACATACAAAGCCCTGCCCTGAATTAAAATAAAGTTGTATCATATGATTTATGTTCTCCATGTAC TTCTAGTTTTCAAAAGCTTTGAATCGCTTCCAGAGAGAGGATCCTACTTTCCGTGTTGGCTTAGATCCAGAGAGCGGGCA GGTTGTCCTTCATTATTTTTATCTTTCTCATAAGTGACAATATCATTGTTCTTATAATGACATTTGTAACTTTTGTGGGT AGACGATCATTTCTGGAATGGGGGAACTTCATTTAGATATCTATGTTGAACGCATTAGGAGAGAGTATAAGGTACCCTTT CTCCCCCAACATATATTCCTTCTTCCTTGATGGTGTTGGTCAAATGTTTTACTCCTGGAGTTTCATTCTTATGTGTTTTT AAGGTTGATGCTTCAGTTGGAAAGCCCCGTGTGAACTTCAGAGAAACTGTTACTCAGCGTGCTGATTTTGATTATTTACA TAAGAAGCAATCTGGAGGGCAAGGGCAATATGGACGGGTAACTGGGTATGTTTTCAAGAGTAATTCTTATTTTATTTATT TTAAGTAGTAACTTGGCTTCACCAGAAATTTAGCTGCATAGGAACTTGTCATGCATACAACCAAAGACTACAAATAGAGA TAGAAGCCAATGAAATTATCCTTAAAATCTTAAAGAAAAAACTTGCTATGAAACTTGTGTATGTTCATTCTCGAAGAGAA TCATGAAGTCAAAAAATGCATCCAATAATAAGTCATGACTTCCACATACTCTTTGATTAATATCCCAAAACAGTTCATAT TCAAGGACAACAGAATTTTAGACAATTATTATCCTCGACAGATTTGTTGGTGGGTGTATACATTGTCTAAAAGGCCCTTC CTAGTTTCTCTGTGGTGCTTGGTTGGCTAGCAGCTACCTCAGAGTTCAGAGGAATTTTTCAGTTGGATATTCAGGGAAGA GCAACCTTTGCTCCCTTGAAGTCCTTTTTCTATTTTTATTTTTTCTAGATATTTAGGAGAATATCTGCTCCTGTGCTTCT TTTTCTTGTTTCATGAATCTCTTCCCTTGGTCAATGTAGTAAGGTTTAGCATTACTTATATTGCAAACTCCCAATTTTTT TGACCCTAATTATTACTAAGTTTCTACCAGTTTTAATTTACAATTGTGTTTCTTCCTTTGGTGCTCTTTGGAGGATCTTT ATATTCTTGTTCTGCATGTCTATTCTCATTCAATAATTTTATCATTTATTGTAAACAAAGATGATTTAAAAGGAGCGTGG TTAAACTAGTAAACTGTGTTATCATTTTGTATGTTCACCGAAACTTGTGTAAATACATTTGTATCTCATTTCATGAGGTT ATGAGCTGTCCAAAATATTTACCTTACTGGAGCTGAATGTAGTAAATAACTTTCTCAATAGGTACATCTGAGACTGAAGA AGTTCTTTTGCTATAAATGTAGCAAACAATTTAACTACATTATATGTTCTGCTGGGTTTTTCTGAAGTAAACTAAGTTCA CGCTGGGTATGAATTACGAAAGCTGTTGTGACTTTCCACTTTTTTTTTGAAGGGACTTCCCACTTTCTAATACATACATA AGTTACTCTACCTTTTGGACTATGAATGGATCCATGGGATATGGATCCATGGGATATATTTTATATTACTTAACTCAAAA TGGTTGTCCCAATAAAAACATTTGGTAGTTGTTAAAGCCACCCCCTCTCATCTAATTCCACCTCCCCCTTGTTAAGTGCG TACACGGTTCACGCACTTATAAGTGAGTGAACTACGCACAAGTGAGTGGAAAAAAAGGGGGTGGAATTAGATGAAAGGGG GTGGCTTTAACAATTACCAAAACATTTTTAACATTGTTTAAGACACATGCACGGTATTGAAGTCACACGTGTTAGTGTAA AACACATTTTTAACAGCTTATTTGTTGATCATGTTATGCTAATTATTTTTACCATTTATTAGAGTATACTATACCAAGTT GAAAATGCTGAAATGTTTAACTGAATTTCATTGGTTGTAAAACTGAATAGTACAATTGATAATCTCTCTATTTATAGAGA GCTAACAAGCTTGCATAAGAAGCTAACTAATTCTGTTATGCCAGCTCAGCTTGACAGCTAAGCTTAACAACTAACTCTGT TATACTAACAACTAATCTTGACAGCTAGGATAACTAACTTCATAGCAGTAACTTATCAGTTACCTATCAGAAACTATATA GTATACTCTAATACCATTCAATGGTGGATGCCAGTTGTATTGTTTCACGTCTTCCCTAATCCCACTTCTATTTCTTGATG ACATATTTGCTATTCAATGTGGTCACAGGTATATTGAACCACTTCCTGCAGGGTCACCAACAAAGTTTGAATTTGAAAAC ATGATTGTTGGTCAGGCTATTCCATCAAATTTTATCCCTGCAATTGAAAAAGGTTTCAAAGAAGCTGCCAACTCGTGAGT TAAATTTATTAGTTTGGCAATCGTGCTTTCAGCATTCAAATTTCATTTTTGTGATTCATCATGTAGTGTTTTGTAATAAC GTAATAGGCAAGATCTCATTGTTTATACAATTTTGCTGCATGCCAATACGATAAAACTGTTGGGTATGAAAACCAATTTT GCTCTCCATACAGTGGTGCTTTAATTGGACATCCAGTTGAAAATCTTCGAGTTGTCTTGACGGATGGTGCTGCCCATGCT GTTGATTCCAGTGAACTTGCATTTAAGTTGGCTTCTATCTATGCTTTTAGACAGGTACTTTTCATTTCTATTATCCATAT TTTATAATATTATTGCACATATTCTTTTGACTCCTTCAGATAATAATGATGGTCCCATTCGTTGAAATTTTATTGTACTA TCTTTTGTAACAGTGTTATCCAGCTTCTAGACCAGTTATATTAGAACCTGTTATGCTTGTTGAGCTGAAAGTACCAACAG AATTTCAGGGAGCTGTTGCTGGTGACCTCAACAAGTGAGGGTTCTTTATTTATTTTTTAATGGATGTTGTTGTAAAAATT CTTAATTTTCTGACATGTTTTTGCATCCGTAAAAAGGAGAAAAGGTGTGATTGTTGGCAACGATCAGGAAGGAGATGATT CTGTCATTACTGCTCATGTAAGTACCTAACTAATCTTAGTTGGCAACCTCTGTATTAGTTCCAATAGTTGATCATTGAAA CTGTGACATAATGCTTTATATGATTTGAAACTTGAATGTGCATCTACATTTTTCTTTGTTCTCTTTTTTCGTGTTCATTA GAAGGTTTACGTCAG
CDS sequence (LotjaGi1g1v0600400.15) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTTCTATGAATGTTCCTGAGCCCGTGATGTCCTTAGCTGTACAGCCAGTCTCAAAAGATTCTGGAGGGCAAAGAGA GGATCCTACTTTCCGTGTTGGCTTAGATCCAGAGAGCGGGCAGACGATCATTTCTGGAATGGGGGAACTTCATTTAGATA TCTATGTTGAACGCATTAGGAGAGAGTATAAGGTTGATGCTTCAGTTGGAAAGCCCCGTCAATCTGGAGGGCAAGGGCAA TATGGACGGGTAACTGGGTATATTGAACCACTTCCTGCAGGGTCACCAACAAAGTTTGAATTTGAAAACATGATTGTTGG TCAGGCTATTCCATCAAATTTTATCCCTGCAATTGAAAAAGGTTTCAAAGAAGCTGCCAACTCAGTTGTCTTGACGGATG GTGCTGCCCATGCTGTTGATTCCAGTGAACTTGCATTTAAGTTGGCTTCTATCTATGCTTTTAGACAGTGTTATCCAGCT TCTAGACCAGTTATATTAGAACCTGTTATGCTTGTTGAGCTGAAAGTACCAACAGAATTTCAGGGAGCTGTTGCTGGTGA CCTCAACAAGTGA
Protein sequence (LotjaGi1g1v0600400.15) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTSMNVPEPVMSLAVQPVSKDSGGQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGKPRQSGGQGQ YGRVTGYIEPLPAGSPTKFEFENMIVGQAIPSNFIPAIEKGFKEAANSVVLTDGAAHAVDSSELAFKLASIYAFRQCYPA SRPVILEPVMLVELKVPTEFQGAVAGDLNK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 190 | 190 | 8.2E-51 | – | |
| MobiDBLite | 1 | 30 | 30 | - | – | |
| SUPERFAMILY | 4 | 72 | 69 | 2.16E-16 | ||
| Pfam | 6 | 71 | 66 | 2.1E-22 | ||
| CDD | 7 | 73 | 67 | 2.60248E-35 | ||
| SUPERFAMILY | 55 | 163 | 109 | 1.09E-22 | ||
| Pfam | 55 | 160 | 106 | 3.2E-19 | ||
| SMART | 57 | 162 | 106 | 1.9E-26 | ||
| Gene3D | 72 | 167 | 96 | 2.0E-36 | ||
| Gene3D | 168 | 190 | 23 | 2.0E-36 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi1g1v0600400.15, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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