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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0060200 |
| Transcript ID | LotjaGi2g1v0060200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-transporting ATPase; TAIR: AT3G22910.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; Swiss-Prot: sp|Q9LIK7|ACA13_ARATH Putative calcium-transporting ATPase 13, plasma membrane-type; TrEMBL-Plants: tr|I1N6I6|I1N6I6_SOYBN Calcium-transporting ATPase; Found in the gene: LotjaGi2g1v0060200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:12736455..12738173) extracted from Lotus japonicus Gifu genome v1.2.
CTCAACCAGATGAAGGTGACCAAGTTTTGGCTTGGCCTAGAGCCAATTGAAGAGGGTGGTTTTACAACAGTTGCTCCATT TGTTCTTCAACTGATCCAAGAAGGTGTGGCTCTCAACACAACTGGTGGGGTGCACAAGTCTAAATCAGGTTCTGAGTTTG AGTTTTCAGGTAGTCCCACTGAGAAAGCAATTTTATCATGGGCTGTGTTTGAATTGAACATGGAGATGGAGTACTTGGTT AAAAGCTGTTCTGTCATTCATGTCGAGACCTTCAACTCAAAGAAGAAAAGAAGTGGGGTCTTGTTGAGGAGGAATAATGC AAACAACAACAACACAGTTGATGCACATTGGAAAGGAGCAGCTGAGATGGTACTCAAAATGTGCTCAAGATACCATGATG CTTCCGGCATTGTGAAAGATCTTGACAATGAGAGTCGACTGAAATTTGAGCAAATTATCCAAGCTATGGCAGCTAGTAGT CTTCGTTGTATCGCTTTTGCACACTCAGAGGTTGCAGAAGAAGAGATTAGAGATGAAGAAGGCGTCACAAGGGTGAAAGA AAATGGTCTAACCCTGTTAGGACTTGTTGGTATTAAAGATCCATGTCGTCCCGGGGTGAAGGAAGCTGTGGAGGCTTGCC AACATGCTGGTGTGAATGTGAAAATGATCACAGGTGACAATGTTTTCACAGCAAAAGCTATAGCCACGGAATGTGGAATA CTTCATCCTAATCAGGACACAGATGGAGCAATTGTTGAAGGGGAAGAATTTCGCAACTACACACATGAAGAGAGATTGGA AAAAGTGGAGAAAATATGTGTCATGGCAAGATCCTCTCCCTTTGATAAGCTTCTAATGGTTCAATACCTTAAACAGAAAG GCCATGTGGTTGCTGTCACTGGGGATGGAACAAATGATGCACCAGCCCTCAAGGAAGCTGATATTGGACTTTCTATGGGG ATCCAAGGCACTGAAGTTGCCAAAGAGAGCTCAGATATTGTCATATTGGATGACAATTTTGCTACTGTGGTCACAGTCTT GAGGTGGGGGAGATGTGTCTATAACAACATCCAGAAGTTTATTCAATTTCAGTTGACAGTGAATGCTGCTGCACTTGTGA TCAATTTTGTGGCAGCAGTGTCAGCAGGGGAAGTGCCACTTACTGCAGTGCAATTGTTATGGGTGAACTTGATCATGGAC ACACTGGGTGCTTTGGCTCTTGCGACAGAGAAACCTACGAAGGAGTTAATGGAGAAATCACCAGTTGGTAGAACAAAACC TCTCATCACTAACATCATGTGGAGGAATCTTGCAGCTCAAGCTTTGTACCAGATAGTTATTCTGCTGACTCTTCAGTTTA AAGGTGAGTCTATCTTTGGTGTGACATCAGGGGTGAATGACACATTGATCTTCAACACATTTGTTCTGTGCCAAGTGTTC AATGAGTTCAATGCAAGGAAGATGGAGGAGAAGAATGTTTTCAAAGGCATACTCAGGAGTAAGCTGTTTTTGGGGATTGT TGGTTTCACAATAATCCTTCAGGTGGTGATGGTTGAGTTTCTCAAGAAGTTTGCAGATACTGAGAGGCTGAATTGGGGGC AATGGGGTCTTTGCATTGGTCTTGCTGCAGTTTCATGGCCAATTGGTTGGCTTGTGAAGTTGATACCTGTTCCTGATGAA CCATTTCTCAATATTTTCAGAATTAGGAAGAAAAAATGA
CDS sequence (LotjaGi2g1v0060200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGTGACCAAGTTTTGGCTTGGCCTAGAGCCAATTGAAGAGGGTGGTTTTACAACAGTTGCTCCATTTGTTCTTCA ACTGATCCAAGAAGGTGTGGCTCTCAACACAACTGGTGGGGTGCACAAGTCTAAATCAGGTTCTGAGTTTGAGTTTTCAG GTAGTCCCACTGAGAAAGCAATTTTATCATGGGCTGTGTTTGAATTGAACATGGAGATGGAGTACTTGGTTAAAAGCTGT TCTGTCATTCATGTCGAGACCTTCAACTCAAAGAAGAAAAGAAGTGGGGTCTTGTTGAGGAGGAATAATGCAAACAACAA CAACACAGTTGATGCACATTGGAAAGGAGCAGCTGAGATGGTACTCAAAATGTGCTCAAGATACCATGATGCTTCCGGCA TTGTGAAAGATCTTGACAATGAGAGTCGACTGAAATTTGAGCAAATTATCCAAGCTATGGCAGCTAGTAGTCTTCGTTGT ATCGCTTTTGCACACTCAGAGGTTGCAGAAGAAGAGATTAGAGATGAAGAAGGCGTCACAAGGGTGAAAGAAAATGGTCT AACCCTGTTAGGACTTGTTGGTATTAAAGATCCATGTCGTCCCGGGGTGAAGGAAGCTGTGGAGGCTTGCCAACATGCTG GTGTGAATGTGAAAATGATCACAGGTGACAATGTTTTCACAGCAAAAGCTATAGCCACGGAATGTGGAATACTTCATCCT AATCAGGACACAGATGGAGCAATTGTTGAAGGGGAAGAATTTCGCAACTACACACATGAAGAGAGATTGGAAAAAGTGGA GAAAATATGTGTCATGGCAAGATCCTCTCCCTTTGATAAGCTTCTAATGGTTCAATACCTTAAACAGAAAGGCCATGTGG TTGCTGTCACTGGGGATGGAACAAATGATGCACCAGCCCTCAAGGAAGCTGATATTGGACTTTCTATGGGGATCCAAGGC ACTGAAGTTGCCAAAGAGAGCTCAGATATTGTCATATTGGATGACAATTTTGCTACTGTGGTCACAGTCTTGAGGTGGGG GAGATGTGTCTATAACAACATCCAGAAGTTTATTCAATTTCAGTTGACAGTGAATGCTGCTGCACTTGTGATCAATTTTG TGGCAGCAGTGTCAGCAGGGGAAGTGCCACTTACTGCAGTGCAATTGTTATGGGTGAACTTGATCATGGACACACTGGGT GCTTTGGCTCTTGCGACAGAGAAACCTACGAAGGAGTTAATGGAGAAATCACCAGTTGGTAGAACAAAACCTCTCATCAC TAACATCATGTGGAGGAATCTTGCAGCTCAAGCTTTGTACCAGATAGTTATTCTGCTGACTCTTCAGTTTAAAGGTGAGT CTATCTTTGGTGTGACATCAGGGGTGAATGACACATTGATCTTCAACACATTTGTTCTGTGCCAAGTGTTCAATGAGTTC AATGCAAGGAAGATGGAGGAGAAGAATGTTTTCAAAGGCATACTCAGGAGTAAGCTGTTTTTGGGGATTGTTGGTTTCAC AATAATCCTTCAGGTGGTGATGTGGGGTCTTTGCATTGGTCTTGCTGCAGTTTCATGGCCAATTGGTTGGCTTGTGAAGT TGATACCTGTTCCTGATGAACCATTTCTCAATATTTTCAGAATTAGGAAGAAAAAATGA
Protein sequence (LotjaGi2g1v0060200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKVTKFWLGLEPIEEGGFTTVAPFVLQLIQEGVALNTTGGVHKSKSGSEFEFSGSPTEKAILSWAVFELNMEMEYLVKSC SVIHVETFNSKKKRSGVLLRRNNANNNNTVDAHWKGAAEMVLKMCSRYHDASGIVKDLDNESRLKFEQIIQAMAASSLRC IAFAHSEVAEEEIRDEEGVTRVKENGLTLLGLVGIKDPCRPGVKEAVEACQHAGVNVKMITGDNVFTAKAIATECGILHP NQDTDGAIVEGEEFRNYTHEERLEKVEKICVMARSSPFDKLLMVQYLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQG TEVAKESSDIVILDDNFATVVTVLRWGRCVYNNIQKFIQFQLTVNAAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLG ALALATEKPTKELMEKSPVGRTKPLITNIMWRNLAAQALYQIVILLTLQFKGESIFGVTSGVNDTLIFNTFVLCQVFNEF NARKMEEKNVFKGILRSKLFLGIVGFTIILQVVMWGLCIGLAAVSWPIGWLVKLIPVPDEPFLNIFRIRKKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 544 | 544 | 2.9E-286 | – | |
| PANTHER | 1 | 544 | 544 | 2.9E-286 | – | |
| Phobius | 1 | 361 | 361 | - | – | |
| SUPERFAMILY | 1 | 203 | 203 | 7.63E-34 | ||
| TIGRFAM | 29 | 515 | 487 | 2.0E-163 | ||
| Gene3D | 29 | 198 | 170 | 1.4E-128 | ||
| Pfam | 42 | 127 | 86 | 1.3E-10 | – | |
| PRINTS | 146 | 164 | 19 | 5.4E-13 | ||
| SUPERFAMILY | 147 | 402 | 256 | 1.84E-53 | ||
| Pfam | 164 | 311 | 148 | 1.9E-15 | – | |
| PRINTS | 191 | 202 | 12 | 1.5E-23 | – | |
| Gene3D | 199 | 342 | 144 | 1.4E-128 | ||
| PRINTS | 213 | 223 | 11 | 1.5E-23 | – | |
| TIGRFAM | 269 | 378 | 110 | 8.7E-34 | ||
| PRINTS | 297 | 316 | 20 | 1.5E-23 | – | |
| PRINTS | 297 | 313 | 17 | 5.4E-13 | ||
| PRINTS | 321 | 333 | 13 | 1.5E-23 | – | |
| PRINTS | 329 | 354 | 26 | 5.4E-13 | ||
| Gene3D | 343 | 514 | 172 | 1.4E-128 | – | |
| SUPERFAMILY | 347 | 537 | 191 | 1.2E-54 | ||
| Phobius | 362 | 380 | 19 | - | – | |
| Phobius | 381 | 385 | 5 | - | – | |
| Pfam | 382 | 513 | 132 | 5.2E-36 | ||
| Phobius | 386 | 405 | 20 | - | – | |
| Phobius | 406 | 424 | 19 | - | – | |
| Phobius | 425 | 448 | 24 | - | – | |
| Phobius | 449 | 453 | 5 | - | – | |
| Phobius | 454 | 478 | 25 | - | – | |
| Phobius | 479 | 498 | 20 | - | – | |
| Phobius | 499 | 524 | 26 | - | – | |
| TMHMM | 502 | 524 | 23 | - | – | |
| Phobius | 525 | 552 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Calcium-transporting ATPase activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Calcium ion transmembrane transport | A process in which a calcium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. |
Expression pattern of LotjaGi2g1v0060200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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