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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0217400 |
Transcript ID | LotjaGi2g1v0217400.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Receptor-like kinase; TAIR: AT3G24550.1 proline extensin-like receptor kinase 1; Swiss-Prot: sp|Q9LV48|PERK1_ARATH Proline-rich receptor-like protein kinase PERK1; TrEMBL-Plants: tr|A0A151TIW5|A0A151TIW5_CAJCA Putative serine/threonine-protein kinase family; Found in the gene: LotjaGi2g1v0217400 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:67200302..67204070) extracted from Lotus japonicus Gifu genome v1.2.
CTCATAATCCTTCAACTGGGTTCTTCTCTTTGATTTTGTTTTTCTCATTTTTCTGCAATGTCCGCCGCACCAGCACCATC TTCGCCGCCGTCAACCCCGGCCGCACCACCACCTACAACACCCTCCGCGCCCCCTCCTGCTACACCTTCATCGCCTCCGC CGGCCACTCCCTCTGCTCCGCCGCCGGCAACCCCCTCTGCGCCGCCGCCGGCTACACCCTCATCATCGCCGCCGCCGGCT ACTCCCTCGTTGTCTCCACCTTCGCCTTCTCCTCCGGCTCCTACTACGCCGGAGGCTTCTCCACCGTCGACATCTACGCC GGGCGGCGGCACTACTCCGAGTCCACCGTCTCGTAGCTCTCCCTCCCCTCCTCCTCCGACGAGTACTGGTAAAACGCCAT CATCGCCGCCTCCGCCGGCGTCCAGGTCTTCTCCTTCTCCTTCACCTCCTTCGTCGTCGTCGAGCATTTCGACCGGTGTC GTCGTCGGGATCGCCGTTGGGGCAGTGGCGATTCTCTTGGTGTTGAGCCTTCTCTGCATATGCTTTAGGAAGAAGAAGAG AAGACGTGATGAGGAGTACTATGTTCCTCCGCCGCCGCAGCAACAACAACCATGGGGACCCAAAAGTGAGAGCTTTACCT GCTACTGTTTCTCAGCTTTAAATCTCATTCTAAATGAAATCTTGTGTTTTTCACTTTTGAAGGTTATTTTTTTACCATAT TGTTTAGATGGGGTTTGTTTAATTTGTAAAATTTGAATTTTGTTTTATTTTGATTGAAAATAGATCTTATGTTTTGATTT TCCTCTTGCTGGATCTGATCATACACCACAAATTTGATATTATGTTCTTTGGTGGATTCAGAATTTCAGATTATGGTACT TTCATCTTTGAAATATCCTTGCACCGCACTTGATTTTGGGGACAAATATAGAACCTTGGTGTGAATCTTGTTACCTCTAA TGTAGATTACTGCACTTGTTTTCATCTGTGTAGCTATTTGTTTTAGTTCATTCTTAGCTATTGAGTTTTGTTCTAGTTTA TAGAGAATGTGGCCTATTACTTTGTGTTTTTGGTGATGTTCAAGTGTATTGATTGGTATTGGAGTCTAATGATAATTTGA TTAATTGCTCATATTGATGCTGATTTCTTCACAATTGGCAGATGAACCGTATGGTGGCCCTCCACGTAACTGGCAACACA ATGCTCCCCCTCCTTCAGATCATGTAGTCTCAATGATGCCTCCGAAGCCATCACCTCCAGTTCCTCCCCCTGTTGCTTCA CGACCGCCATCCAATTCATCTTCGTCACTTTACTCTGCACAACCGCCACCGCCTCCTCCTTTCATGAACAGCAGTGGAGG GTCTGGATCAAACTATTCTGGTGGTGAACCACTTCCACCTCCTTCTCCAGGCATGTCATTGGGATTCTCGAAGAGCGCAT TTACATACGAGGAGTTGGCTCGGGCAACGGATGGCTTCACCGATGCCAACCTCCTTGGATCAGGTGGATTTGGATACGTG CACAGAGGAATCCTCCCCAATGGCAAGGAGGTTGCTGTGAAGCAGCTGAAGGCTGGAAGTGGGCAAGGGGAGCGTGAATT TCAAGCTGAAGTCGAGATTATTAGCCGTGTTCATCACAAACATCTTGTCTCTTTGGTTGGATACTGCAGCACTGGGGCCC AGAGGCTCCTTGTTTATGAATTTGTCCCCAACAATACAATGGAATTCCATTTACACGGTACATCTGGTTTTAGCTTTTCT TTCAAAATAATGTTTCTTAAAATTCAATCTAATTGAAAGTTGGCACCAACTATTGATGTATGTTTTGTTGCATAATACTT CTGATAGAAGCAGTCTGATGTGTTTTTTGAACTTCAGGAAAAGGGCGGCCTACCATGGATTGGCCCACGAGACTACGAAT TGCTTTGGGATCTGCAAAAGGGCTTGCATATCTTCATGAAGATTGTATGTCCTGTCCATTTGATTGTGATTACTTCAGCT ATAATTGATTTAAGCCAACCTTAATGTTCATTGTAATTTGCTGTACATTCAGGTCACCCTAAGATCATCCATCGCGATAT TAAAGCTGCTAACATCCTTCTGGATTTCAAGTTTGAAGCAAAGGTATGTTCTGTTATGTGTCTTCCTAGCAGTCATAGTT ATTGGCCCTTGCAAAAAAATTTGTTTGATGTGAATAATCTGTTTTAAACTTGCAATCCTTCAAAAGGTGTCTGTGGTAGT GTTGATGCCCCCTTAAAATGTTATAAAAGATTGTGTGATTGATAGAATTGTTAGTGTAAAGTGTGAATCTTAGATTAATT TAGTATGAATTGTTTTCTTTTGGCAGGTTGCAGATTTTGGTCTAGCGAAGTTTTCTTCTGACCTCAACACTCATGTTTCT ACGCGAGTGATGGGAACTTTTGGGTAGGAATTAACTTCCTTCTATCTTTTCAAAAACTTTGGATATCAACAGGAAAAGTA GTAGTTTGTTCATGAAATCTTCCATATGGAGGTTCTGGACATGAGTGTTTGAGTGTAATTGTGCTATTCTTCAACGATAT ATGAAATCTTCCATATGGAGGTTCTGGACATGAGTGTTTGAGTGTAATTGTGCTATTCTTCAACGATATGCACATAGAAA GTATATGGCGTTTTTGTTGTCAACAAAAGTTGATAAGCAAAGCTAGATTATGATATGCTGTTTGGCATTTTATGTATGCA ATGCTCATGAATCATCATTTGCTGCATACAGGTATCTGGCTCCAGAATATGCTGCCAGTGGAAAACTTACAGACAAATCG GATGTTTTCTCCTATGGAGTCATGCTCCTTGAGTTAATAACTGGACGGCGACCAGTTGATAAAAATCAAACTTACCAGGA CGATAGTTTGGTAGAATGGGTGAGTAGAGTATTACAGTGCTCCTTGTTTCTTGCTGAAACATAATTTACAACTAAAATTT CATAGACGTTTTCATATTCATAGAACAGCTCTTAACTCTATCCATCTTCATCATCACAGGCTAGGCCTTTGCTCACACGT GCTTTGGAAGAGGATGATTTTGATTCTCTTATTGACCCGAGGATCCAGAATGAATATGATCCTAATGAGATGCTTCGTAT GGTAGCATGTGCTGCATCTTGCACACGTCATTCAGCTAAGCGTCGACCAAGGATGAGCCAGGTAAAGTACAATGATGAAT TTGTGACAAAAAATCTTAACACTATGATGACTCAGACTAAAAGGATTTAGTTGGATTTCAGTTCCCACATTTAGATTTTT GGACCTGTTTGTGCGATTGAAGCTATGGTTGGGTATCTGTTAGGCCTAGTTCAATCGGACGTTAACACACACTTCACGAC TAGAAGTGAATGAAACCCTTCTTATCTGTTAACATTACACTACTGGTATCAAAACTTGCTGAATCTTATCTAATAACGAT ACATTACACTGCAGGTCGTTCGTGCTCTGGAAGGAGATGTGTCTCTATCAGATCTTAATGAAGGAATAAGACCTGGACAC AGCACTGTCTACAGTTCTCATGAAAGCTCAGATTATGATACTTCACAATACAAGGAAGACATGAAGAAGTTCAGAAAAAT GGCATTGGGAACTCAGGATTATGGTGCCAGCAGTGAGTACAGTGCGGCTACGAGCGAGTACGGTTTAAACCCATCCGGCT CAAGCAGCGAAGCCCAGAGCCTCCAGCACACACGGGAAATGGAAATGAGAAAGTTGAAGAACAGTCAAGGTTTCAGTGGA AGCTCTTGA
CDS sequence (LotjaGi2g1v0217400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACAGCAGTGGAGGGTCTGGATCAAACTATTCTGGTGGTGAACCACTTCCACCTCCTTCTCCAGGCATGTCATTGGG ATTCTCGAAGAGCGCATTTACATACGAGGAGTTGGCTCGGGCAACGGATGGCTTCACCGATGCCAACCTCCTTGGATCAG GTGGATTTGGATACGTGCACAGAGGAATCCTCCCCAATGGCAAGGAGGTTGCTGTGAAGCAGCTGAAGGCTGGAAGTGGG CAAGGGGAGCGTGAATTTCAAGCTGAAGTCGAGATTATTAGCCGTGTTCATCACAAACATCTTGTCTCTTTGGTTGGATA CTGCAGCACTGGGGCCCAGAGGCTCCTTGTTTATGAATTTGTCCCCAACAATACAATGGAATTCCATTTACACGGAAAAG GGCGGCCTACCATGGATTGGCCCACGAGACTACGAATTGCTTTGGGATCTGCAAAAGGGCTTGCATATCTTCATGAAGAT TGTCACCCTAAGATCATCCATCGCGATATTAAAGCTGCTAACATCCTTCTGGATTTCAAGTTTGAAGCAAAGGTTGCAGA TTTTGGTCTAGCGAAGTTTTCTTCTGACCTCAACACTCATGTTTCTACGCGAGTGATGGGAACTTTTGGGTATCTGGCTC CAGAATATGCTGCCAGTGGAAAACTTACAGACAAATCGGATGTTTTCTCCTATGGAGTCATGCTCCTTGAGTTAATAACT GGACGGCGACCAGTTGATAAAAATCAAACTTACCAGGACGATAGTTTGGTAGAATGGGCTAGGCCTTTGCTCACACGTGC TTTGGAAGAGGATGATTTTGATTCTCTTATTGACCCGAGGATCCAGAATGAATATGATCCTAATGAGATGCTTCGTATGG TAGCATGTGCTGCATCTTGCACACGTCATTCAGCTAAGCGTCGACCAAGGATGAGCCAGGTCGTTCGTGCTCTGGAAGGA GATGTGTCTCTATCAGATCTTAATGAAGGAATAAGACCTGGACACAGCACTGTCTACAGTTCTCATGAAAGCTCAGATTA TGATACTTCACAATACAAGGAAGACATGAAGAAGTTCAGAAAAATGGCATTGGGAACTCAGGATTATGGTGCCAGCAGTG AGTACAGTGCGGCTACGAGCGAGTACGGTTTAAACCCATCCGGCTCAAGCAGCGAAGCCCAGAGCCTCCAGCACACACGG GAAATGGAAATGAGAAAGTTGAAGAACAGTCAAGGTTTCAGTGGAAGCTCTTGA
Protein sequence (LotjaGi2g1v0217400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNSSGGSGSNYSGGEPLPPPSPGMSLGFSKSAFTYEELARATDGFTDANLLGSGGFGYVHRGILPNGKEVAVKQLKAGSG QGEREFQAEVEIISRVHHKHLVSLVGYCSTGAQRLLVYEFVPNNTMEFHLHGKGRPTMDWPTRLRIALGSAKGLAYLHED CHPKIIHRDIKAANILLDFKFEAKVADFGLAKFSSDLNTHVSTRVMGTFGYLAPEYAASGKLTDKSDVFSYGVMLLELIT GRRPVDKNQTYQDDSLVEWARPLLTRALEEDDFDSLIDPRIQNEYDPNEMLRMVACAASCTRHSAKRRPRMSQVVRALEG DVSLSDLNEGIRPGHSTVYSSHESSDYDTSQYKEDMKKFRKMALGTQDYGASSEYSAATSEYGLNPSGSSSEAQSLQHTR EMEMRKLKNSQGFSGSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
MobiDBLite | 1 | 23 | 23 | - | – | |
PANTHER | 18 | 354 | 337 | 6.5E-200 | – | |
PANTHER | 18 | 354 | 337 | 6.5E-200 | – | |
SUPERFAMILY | 19 | 318 | 300 | 5.59E-80 | ||
Gene3D | 24 | 120 | 97 | 9.5E-36 | – | |
ProSiteProfiles | 45 | 324 | 280 | 35.976 | ||
SMART | 45 | 318 | 274 | 1.1E-33 | ||
Pfam | 49 | 318 | 270 | 5.2E-46 | ||
ProSitePatterns | 51 | 73 | 23 | - | ||
Gene3D | 121 | 329 | 209 | 2.6E-62 | – | |
ProSitePatterns | 165 | 177 | 13 | - | ||
MobiDBLite | 375 | 397 | 23 | - | – | |
MobiDBLite | 375 | 417 | 43 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0217400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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