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LotjaGi2g1v0217400.2

Overview

Field Value
Gene ID LotjaGi2g1v0217400
Transcript ID LotjaGi2g1v0217400.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT3G24550.1 proline extensin-like receptor kinase 1; Swiss-Prot: sp|Q9LV48|PERK1_ARATH Proline-rich receptor-like protein kinase PERK1; TrEMBL-Plants: tr|A0A151TIW5|A0A151TIW5_CAJCA Putative serine/threonine-protein kinase family; Found in the gene: LotjaGi2g1v0217400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:67200302..67204070) extracted from Lotus japonicus Gifu genome v1.2.

CTCATAATCCTTCAACTGGGTTCTTCTCTTTGATTTTGTTTTTCTCATTTTTCTGCAATGTCCGCCGCACCAGCACCATC TTCGCCGCCGTCAACCCCGGCCGCACCACCACCTACAACACCCTCCGCGCCCCCTCCTGCTACACCTTCATCGCCTCCGC CGGCCACTCCCTCTGCTCCGCCGCCGGCAACCCCCTCTGCGCCGCCGCCGGCTACACCCTCATCATCGCCGCCGCCGGCT ACTCCCTCGTTGTCTCCACCTTCGCCTTCTCCTCCGGCTCCTACTACGCCGGAGGCTTCTCCACCGTCGACATCTACGCC GGGCGGCGGCACTACTCCGAGTCCACCGTCTCGTAGCTCTCCCTCCCCTCCTCCTCCGACGAGTACTGGTAAAACGCCAT CATCGCCGCCTCCGCCGGCGTCCAGGTCTTCTCCTTCTCCTTCACCTCCTTCGTCGTCGTCGAGCATTTCGACCGGTGTC GTCGTCGGGATCGCCGTTGGGGCAGTGGCGATTCTCTTGGTGTTGAGCCTTCTCTGCATATGCTTTAGGAAGAAGAAGAG AAGACGTGATGAGGAGTACTATGTTCCTCCGCCGCCGCAGCAACAACAACCATGGGGACCCAAAAGTGAGAGCTTTACCT GCTACTGTTTCTCAGCTTTAAATCTCATTCTAAATGAAATCTTGTGTTTTTCACTTTTGAAGGTTATTTTTTTACCATAT TGTTTAGATGGGGTTTGTTTAATTTGTAAAATTTGAATTTTGTTTTATTTTGATTGAAAATAGATCTTATGTTTTGATTT TCCTCTTGCTGGATCTGATCATACACCACAAATTTGATATTATGTTCTTTGGTGGATTCAGAATTTCAGATTATGGTACT TTCATCTTTGAAATATCCTTGCACCGCACTTGATTTTGGGGACAAATATAGAACCTTGGTGTGAATCTTGTTACCTCTAA TGTAGATTACTGCACTTGTTTTCATCTGTGTAGCTATTTGTTTTAGTTCATTCTTAGCTATTGAGTTTTGTTCTAGTTTA TAGAGAATGTGGCCTATTACTTTGTGTTTTTGGTGATGTTCAAGTGTATTGATTGGTATTGGAGTCTAATGATAATTTGA TTAATTGCTCATATTGATGCTGATTTCTTCACAATTGGCAGATGAACCGTATGGTGGCCCTCCACGTAACTGGCAACACA ATGCTCCCCCTCCTTCAGATCATGTAGTCTCAATGATGCCTCCGAAGCCATCACCTCCAGTTCCTCCCCCTGTTGCTTCA CGACCGCCATCCAATTCATCTTCGTCACTTTACTCTGCACAACCGCCACCGCCTCCTCCTTTCATGAACAGCAGTGGAGG GTCTGGATCAAACTATTCTGGTGGTGAACCACTTCCACCTCCTTCTCCAGGCATGTCATTGGGATTCTCGAAGAGCGCAT TTACATACGAGGAGTTGGCTCGGGCAACGGATGGCTTCACCGATGCCAACCTCCTTGGATCAGGTGGATTTGGATACGTG CACAGAGGAATCCTCCCCAATGGCAAGGAGGTTGCTGTGAAGCAGCTGAAGGCTGGAAGTGGGCAAGGGGAGCGTGAATT TCAAGCTGAAGTCGAGATTATTAGCCGTGTTCATCACAAACATCTTGTCTCTTTGGTTGGATACTGCAGCACTGGGGCCC AGAGGCTCCTTGTTTATGAATTTGTCCCCAACAATACAATGGAATTCCATTTACACGGTACATCTGGTTTTAGCTTTTCT TTCAAAATAATGTTTCTTAAAATTCAATCTAATTGAAAGTTGGCACCAACTATTGATGTATGTTTTGTTGCATAATACTT CTGATAGAAGCAGTCTGATGTGTTTTTTGAACTTCAGGAAAAGGGCGGCCTACCATGGATTGGCCCACGAGACTACGAAT TGCTTTGGGATCTGCAAAAGGGCTTGCATATCTTCATGAAGATTGTATGTCCTGTCCATTTGATTGTGATTACTTCAGCT ATAATTGATTTAAGCCAACCTTAATGTTCATTGTAATTTGCTGTACATTCAGGTCACCCTAAGATCATCCATCGCGATAT TAAAGCTGCTAACATCCTTCTGGATTTCAAGTTTGAAGCAAAGGTATGTTCTGTTATGTGTCTTCCTAGCAGTCATAGTT ATTGGCCCTTGCAAAAAAATTTGTTTGATGTGAATAATCTGTTTTAAACTTGCAATCCTTCAAAAGGTGTCTGTGGTAGT GTTGATGCCCCCTTAAAATGTTATAAAAGATTGTGTGATTGATAGAATTGTTAGTGTAAAGTGTGAATCTTAGATTAATT TAGTATGAATTGTTTTCTTTTGGCAGGTTGCAGATTTTGGTCTAGCGAAGTTTTCTTCTGACCTCAACACTCATGTTTCT ACGCGAGTGATGGGAACTTTTGGGTAGGAATTAACTTCCTTCTATCTTTTCAAAAACTTTGGATATCAACAGGAAAAGTA GTAGTTTGTTCATGAAATCTTCCATATGGAGGTTCTGGACATGAGTGTTTGAGTGTAATTGTGCTATTCTTCAACGATAT ATGAAATCTTCCATATGGAGGTTCTGGACATGAGTGTTTGAGTGTAATTGTGCTATTCTTCAACGATATGCACATAGAAA GTATATGGCGTTTTTGTTGTCAACAAAAGTTGATAAGCAAAGCTAGATTATGATATGCTGTTTGGCATTTTATGTATGCA ATGCTCATGAATCATCATTTGCTGCATACAGGTATCTGGCTCCAGAATATGCTGCCAGTGGAAAACTTACAGACAAATCG GATGTTTTCTCCTATGGAGTCATGCTCCTTGAGTTAATAACTGGACGGCGACCAGTTGATAAAAATCAAACTTACCAGGA CGATAGTTTGGTAGAATGGGTGAGTAGAGTATTACAGTGCTCCTTGTTTCTTGCTGAAACATAATTTACAACTAAAATTT CATAGACGTTTTCATATTCATAGAACAGCTCTTAACTCTATCCATCTTCATCATCACAGGCTAGGCCTTTGCTCACACGT GCTTTGGAAGAGGATGATTTTGATTCTCTTATTGACCCGAGGATCCAGAATGAATATGATCCTAATGAGATGCTTCGTAT GGTAGCATGTGCTGCATCTTGCACACGTCATTCAGCTAAGCGTCGACCAAGGATGAGCCAGGTAAAGTACAATGATGAAT TTGTGACAAAAAATCTTAACACTATGATGACTCAGACTAAAAGGATTTAGTTGGATTTCAGTTCCCACATTTAGATTTTT GGACCTGTTTGTGCGATTGAAGCTATGGTTGGGTATCTGTTAGGCCTAGTTCAATCGGACGTTAACACACACTTCACGAC TAGAAGTGAATGAAACCCTTCTTATCTGTTAACATTACACTACTGGTATCAAAACTTGCTGAATCTTATCTAATAACGAT ACATTACACTGCAGGTCGTTCGTGCTCTGGAAGGAGATGTGTCTCTATCAGATCTTAATGAAGGAATAAGACCTGGACAC AGCACTGTCTACAGTTCTCATGAAAGCTCAGATTATGATACTTCACAATACAAGGAAGACATGAAGAAGTTCAGAAAAAT GGCATTGGGAACTCAGGATTATGGTGCCAGCAGTGAGTACAGTGCGGCTACGAGCGAGTACGGTTTAAACCCATCCGGCT CAAGCAGCGAAGCCCAGAGCCTCCAGCACACACGGGAAATGGAAATGAGAAAGTTGAAGAACAGTCAAGGTTTCAGTGGA AGCTCTTGA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0217400.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAACAGCAGTGGAGGGTCTGGATCAAACTATTCTGGTGGTGAACCACTTCCACCTCCTTCTCCAGGCATGTCATTGGG ATTCTCGAAGAGCGCATTTACATACGAGGAGTTGGCTCGGGCAACGGATGGCTTCACCGATGCCAACCTCCTTGGATCAG GTGGATTTGGATACGTGCACAGAGGAATCCTCCCCAATGGCAAGGAGGTTGCTGTGAAGCAGCTGAAGGCTGGAAGTGGG CAAGGGGAGCGTGAATTTCAAGCTGAAGTCGAGATTATTAGCCGTGTTCATCACAAACATCTTGTCTCTTTGGTTGGATA CTGCAGCACTGGGGCCCAGAGGCTCCTTGTTTATGAATTTGTCCCCAACAATACAATGGAATTCCATTTACACGGAAAAG GGCGGCCTACCATGGATTGGCCCACGAGACTACGAATTGCTTTGGGATCTGCAAAAGGGCTTGCATATCTTCATGAAGAT TGTCACCCTAAGATCATCCATCGCGATATTAAAGCTGCTAACATCCTTCTGGATTTCAAGTTTGAAGCAAAGGTTGCAGA TTTTGGTCTAGCGAAGTTTTCTTCTGACCTCAACACTCATGTTTCTACGCGAGTGATGGGAACTTTTGGGTATCTGGCTC CAGAATATGCTGCCAGTGGAAAACTTACAGACAAATCGGATGTTTTCTCCTATGGAGTCATGCTCCTTGAGTTAATAACT GGACGGCGACCAGTTGATAAAAATCAAACTTACCAGGACGATAGTTTGGTAGAATGGGCTAGGCCTTTGCTCACACGTGC TTTGGAAGAGGATGATTTTGATTCTCTTATTGACCCGAGGATCCAGAATGAATATGATCCTAATGAGATGCTTCGTATGG TAGCATGTGCTGCATCTTGCACACGTCATTCAGCTAAGCGTCGACCAAGGATGAGCCAGGTCGTTCGTGCTCTGGAAGGA GATGTGTCTCTATCAGATCTTAATGAAGGAATAAGACCTGGACACAGCACTGTCTACAGTTCTCATGAAAGCTCAGATTA TGATACTTCACAATACAAGGAAGACATGAAGAAGTTCAGAAAAATGGCATTGGGAACTCAGGATTATGGTGCCAGCAGTG AGTACAGTGCGGCTACGAGCGAGTACGGTTTAAACCCATCCGGCTCAAGCAGCGAAGCCCAGAGCCTCCAGCACACACGG GAAATGGAAATGAGAAAGTTGAAGAACAGTCAAGGTTTCAGTGGAAGCTCTTGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0217400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MNSSGGSGSNYSGGEPLPPPSPGMSLGFSKSAFTYEELARATDGFTDANLLGSGGFGYVHRGILPNGKEVAVKQLKAGSG QGEREFQAEVEIISRVHHKHLVSLVGYCSTGAQRLLVYEFVPNNTMEFHLHGKGRPTMDWPTRLRIALGSAKGLAYLHED CHPKIIHRDIKAANILLDFKFEAKVADFGLAKFSSDLNTHVSTRVMGTFGYLAPEYAASGKLTDKSDVFSYGVMLLELIT GRRPVDKNQTYQDDSLVEWARPLLTRALEEDDFDSLIDPRIQNEYDPNEMLRMVACAASCTRHSAKRRPRMSQVVRALEG DVSLSDLNEGIRPGHSTVYSSHESSDYDTSQYKEDMKKFRKMALGTQDYGASSEYSAATSEYGLNPSGSSSEAQSLQHTR EMEMRKLKNSQGFSGSS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 23 23 - –
PANTHER
PTHR27001:SF793
18 354 337 6.5E-200 –
PANTHER
PTHR27001
18 354 337 6.5E-200 –
SUPERFAMILY
SSF56112
19 318 300 5.59E-80
IPR011009
Gene3D
G3DSA:3.30.200.20
24 120 97 9.5E-36 –
ProSiteProfiles
PS50011
45 324 280 35.976
IPR000719
SMART
SM00220
45 318 274 1.1E-33
IPR000719
Pfam
PF07714
49 318 270 5.2E-46
IPR001245
ProSitePatterns
PS00107
51 73 23 -
IPR017441
Gene3D
G3DSA:1.10.510.10
121 329 209 2.6E-62 –
ProSitePatterns
PS00108
165 177 13 -
IPR008271
MobiDBLite
mobidb-lite
375 397 23 - –
MobiDBLite
mobidb-lite
375 417 43 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0217400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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