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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0246500 |
| Transcript ID | LotjaGi2g1v0246500.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein KINESIN LIGHT CHAIN-RELATED 3; TAIR: AT3G27960.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9LII8|KLCR2_ARATH Protein KINESIN LIGHT CHAIN-RELATED 2; TrEMBL-Plants: tr|A0A0L9VQ02|A0A0L9VQ02_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0246500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:71212674..71216309) extracted from Lotus japonicus Gifu genome v1.2.
GGTCACCTTCCTGGTTTTGCTTCAACATTCCAACTCCATGCTGCAAGCACAACTCTCACACATGCACATTATCTAGAAAA TATCAATAATTCCATTTCACTTTCCCATTCTGCCCTCCACATTTCTCCAAAACCCCCATCACATGCCATGAACTAGTCTT CTTGCACACCCCACATGTCTGTGTATATATATAAATGCATACCTATACAAATGCTACAGCTATATTGTCCCTCATATCTA TTCATCTGTACATAACAACACCCTTACAAAACAGAACAACAACAACAACCTTGGCAAAGTTTTTGATTTTGTTCTTCTGA AAGTACTAAACCAAGGTAACCCCATTCATTGTCTCCTAGTTTTATTTTACTTCAGTTTCAGTTCCTATCTTTAATGCATT TAAACACACCTGTTTTGTACCTGTTATCAATGAGTTACTGCATTTTTATTGCCATAAACGAATTTTTGATTGCTATTATA TATCCTTGTTGTGTTATGTTGTGTTGCACATTAGAAGAAGCATCAGGGAAGAACCAGTTTCAAGCAATTAAACAGATGGA ATATTTTTAGCTACTTTTGGTTTCTCTTTTTCTTTTTTTGGGATTGCTGTGTTGGATTATAAAGTTTGATTCATTTCCCT TTTACTTTTTGTTTCTTCTTTGATAAATTTTTATTGGTTTTCAATGAAATTTACATAACACCTGTTAAGTCATCAATGGA TTTGAGGCTTGTCTCTGCTGCACAGTGAAAGTAGGTAGCTATTGTTTTTGTGATTGAGAATGAGACCCAAATCATTAATA TATACTGTGTTCTCAATTCTTCTGCAGGGTTTGTTTTTGTTTTTTCCTAGTTTGAAGAATTTGACAGGTTTTCTTTTCCT CTAATTTTAGGTGAACAATTGAATATATATACTGTTTGATTCAATGCCTGAGAGAGCTATGGATGAGTTGAACATGAATA TTGCAGGAGAGGGGCCTAGTGGGAGTTATACACCCCATAAGGATAACTTCAATCAACAAGCATCTCCAAGGAGTACACTG AGTCCAAGAAGCATTCAGAGTAGTGACTCAATTGATTTGGCTATTGATGGTGTGGTGGATACCTCAATTGAGCAATTGTA TTACAATGTGTGTGAAATGCGAAGCTCTGATCAATCACCCTCCAGGGCTAGCTTTTACTCATATGGTGAAGAGTCAAGAA TTGATTCAGAATTGGGCCATCTTGTTGGAGGTATCTTGGAGATTACAAAGGAGGTGGTTACAGAGAATAAAGAAGAGTCC AACGGCAATGCTGCTGAGAAAGATATTGTGTCATGTGGCAAGGAAGCTACAAAGAAGGATAATAACCAATCACATTCACC AAGCTCAAGGATCATTGAAGGATCAGCCAAGTCAACCCCCAAAAGCAGAAATTTGCGTGAGAGACCATCAACTGACAAGA GGAGTGAAAGGAGCAGCAGAAAAGGAAGTCTTTACCCTATGAGGAAGCATAGGAGCCTTGCTTTGAGGGGGATCATTGAG GAACGTATTGCCACTGGGTTAGATAATCCAGATTTGGGACCATTTTTGCTCAAGCAAACAAGAGATATGATCTCTTCAGG TGAGAATCCACAGAAAGCTCTTGATTTGGCTCTTAGAGCTCTGAAATCATTTGAGATGTGTGCAGATGGGAAACCCAGTT TAGAATTGGTCATGTGTCTGCATGTCTTGGCAACAATTTACTGTAATTTAGGACAATATAATGAGGCTATTCCCATTCTT GAGCGCTCCATTGATATTCCTGTGTTAGAGGATGGCCAAGATCATGCATTGGCCAAGTTTGCAGGATGCATGCAGTTGGG TGATACTTATGCAATGATGGGGAACATTGAGAATTCTATACTGTTTTACACAGCAGGACTTGAGATTCAAGGGCAGGTCT TGGGGGAAACTGACCCGAGATTTGGCGAGACGTGTCGGTATGTGGCTGAGGCTCATGTTCAGGCTCTGCAATTTGACGAG GCTGAGAGGCTGTGTCAGATGGCTCTTGAAATTCACAGGGGAAATGGAAATGGATCTTCTGCTTCTGTTGAAGAATCTGC AGATAGGAGACTAATGGGGCTTATCTATGACTCAAAGGGTGATTATGAAGCTGCATTAGAGCACTACGTTCTGGCAAGCA TGGCCATGTCAGCAAATGGCCAAGAACAAGATGTGGCTTCAGTTGATTCCAGCATAGGTGATGCCTATCTAGCATTGGCA CGCTACGATGAGGCGGTGTTCTCTTATCAGAAAGCACTCACTGTGTTCAAATCAACCAAAGGAGAGAACCATCCAAATGT TGCTTCAGTCTATGTAAGGTTAGCTGATTTGTACAACAAAATAGGAAAATTCAAGGATTCAAAATCCTACTGTGAGAATG CACTCAGAATTTTCGGAAAGAGCAAACCAGGAATCCCCCCAGAAGAGATTGCTAATGGTTTAATAGATGTTGCTGCTATC TATCAATCCATGAATGATTTGGAGAAGGGGTTGAAGTTACTCAAAAAGGCCTTGAAGATATATGGCCATGCTCCTGGTCA ACAAAGTACTATTGCAGGGATTGAGGCACAAATGGGGGTTATGTATTACATGCTAGGGAACTATTCTGATTCTTACAACA TCTTCAAAAGCGCCGTTGCCAAGTTTCGTGCCAGTGGAGAGAAAAAATCTGCTTTGTTTGGGATTGCTTTGAACCAAATG GGTCTTGCATGTGTGCAACGTTATGCTATAAATGAAGCAGCAGATTTGTTTGAAGAGGCCAGGACTATATTGGAGAAAGA GTATGGTCAATATCACCCAGACACCTTAGGGGTTTATAGCAATCTAGCAGGAACCTATGATGCAATGGGAAGGTAATATT TTCATTGATGACTAACTCTCCGTAGTCCTTATTGTTCTGGCTTATAATTATGGTATTTATGAGTGCTACTTTCTTCATCT CTTTTGTTTACAACTTTATGCAGTATAAGAATACTTGGAAATTTCAGATTTTAATTGCTGATATTTCTTGTGATAATTTT GCAGAGTGGATGATGCCATTGAGATTTTGGAATTTGTGGTTGGAATGAGAGAAGAGAAGCTCGGAACAGCGAACCCCGAT GTGGATGACGAGAAACGTAGATTGGCAGAATTGCTGAAAGAAGCAGGCAGGGGTCGGAATAGGAAATCGAAAAGATCATT GGAAACTCTCCTTGATGCCAATTCTCGGCTTATAAAAAACAATAGCATTAAGGTCCTATAAAGCTGTAGATGTATATAAA ACACAATGAGATTAACTGGTTTGCTTATTTTGATCATTGTTTGAAAACAATAACAAAGTGGTGGAAATAGGCTCCACATC CAATTGTTCACTGGATAAGAATGCTCACAGAATTTACTTTGTTTATCTATTTTCTATAGCTCACAGGAAAGTTCTGTTTT AATACTCTTCTTTGTATAATTGAATTTATAAATGGTGGAAATTCAGTTTTCATGTACACAAATGAATGTTGAAACTTAAT TTTCTCTGCTTGTACACCAAACTGAAAGCTCAGTTGTTTCTAACCATGTTGAGATGCAACCATATATTTAGGGATGGCAA TGGGCAGGATTTGGGTAGGGTACTATAGTACTCATC
CDS sequence (LotjaGi2g1v0246500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTGAGAGAGCTATGGATGAGTTGAACATGAATATTGCAGGAGAGGGGCCTAGTGGGAGTTATACACCCCATAAGGA TAACTTCAATCAACAAGCATCTCCAAGGAGTACACTGAGTCCAAGAAGCATTCAGAGTAGTGACTCAATTGATTTGGCTA TTGATGGTGTGGTGGATACCTCAATTGAGCAATTGTATTACAATGTGTGTGAAATGCGAAGCTCTGATCAATCACCCTCC AGGGCTAGCTTTTACTCATATGGTGAAGAGTCAAGAATTGATTCAGAATTGGGCCATCTTGTTGGAGGTATCTTGGAGAT TACAAAGGAGGTGGTTACAGAGAATAAAGAAGAGTCCAACGGCAATGCTGCTGAGAAAGATATTGTGTCATGTGGCAAGG AAGCTACAAAGAAGGATAATAACCAATCACATTCACCAAGCTCAAGGATCATTGAAGGATCAGCCAAGTCAACCCCCAAA AGCAGAAATTTGCGTGAGAGACCATCAACTGACAAGAGGAGTGAAAGGAGCAGCAGAAAAGGAAGTCTTTACCCTATGAG GAAGCATAGGAGCCTTGCTTTGAGGGGGATCATTGAGGAACGTATTGCCACTGGGTTAGATAATCCAGATTTGGGACCAT TTTTGCTCAAGCAAACAAGAGATATGATCTCTTCAGGTGAGAATCCACAGAAAGCTCTTGATTTGGCTCTTAGAGCTCTG AAATCATTTGAGATGTGTGCAGATGGGAAACCCAGTTTAGAATTGGTCATGTGTCTGCATGTCTTGGCAACAATTTACTG TAATTTAGGACAATATAATGAGGCTATTCCCATTCTTGAGCGCTCCATTGATATTCCTGTGTTAGAGGATGGCCAAGATC ATGCATTGGCCAAGTTTGCAGGATGCATGCAGTTGGGTGATACTTATGCAATGATGGGGAACATTGAGAATTCTATACTG TTTTACACAGCAGGACTTGAGATTCAAGGGCAGGTCTTGGGGGAAACTGACCCGAGATTTGGCGAGACGTGTCGGTATGT GGCTGAGGCTCATGTTCAGGCTCTGCAATTTGACGAGGCTGAGAGGCTGTGTCAGATGGCTCTTGAAATTCACAGGGGAA ATGGAAATGGATCTTCTGCTTCTGTTGAAGAATCTGCAGATAGGAGACTAATGGGGCTTATCTATGACTCAAAGGGTGAT TATGAAGCTGCATTAGAGCACTACGTTCTGGCAAGCATGGCCATGTCAGCAAATGGCCAAGAACAAGATGTGGCTTCAGT TGATTCCAGCATAGGTGATGCCTATCTAGCATTGGCACGCTACGATGAGGCGGTGTTCTCTTATCAGAAAGCACTCACTG TGTTCAAATCAACCAAAGGAGAGAACCATCCAAATGTTGCTTCAGTCTATGTAAGGTTAGCTGATTTGTACAACAAAATA GGAAAATTCAAGGATTCAAAATCCTACTGTGAGAATGCACTCAGAATTTTCGGAAAGAGCAAACCAGGAATCCCCCCAGA AGAGATTGCTAATGGTTTAATAGATGTTGCTGCTATCTATCAATCCATGAATGATTTGGAGAAGGGGTTGAAGTTACTCA AAAAGGCCTTGAAGATATATGGCCATGCTCCTGGTCAACAAAGTACTATTGCAGGGATTGAGGCACAAATGGGGGTTATG TATTACATGCTAGGGAACTATTCTGATTCTTACAACATCTTCAAAAGCGCCGTTGCCAAGTTTCGTGCCAGTGGAGAGAA AAAATCTGCTTTGTTTGGGATTGCTTTGAACCAAATGGGTCTTGCATGTGTGCAACGTTATGCTATAAATGAAGCAGCAG ATTTGTTTGAAGAGGCCAGGACTATATTGGAGAAAGAGTATGGTCAATATCACCCAGACACCTTAGGGGTTTATAGCAAT CTAGCAGGAACCTATGATGCAATGGGAAGAGTGGATGATGCCATTGAGATTTTGGAATTTGTGGTTGGAATGAGAGAAGA GAAGCTCGGAACAGCGAACCCCGATGTGGATGACGAGAAACGTAGATTGGCAGAATTGCTGAAAGAAGCAGGCAGGGGTC GGAATAGGAAATCGAAAAGATCATTGGAAACTCTCCTTGATGCCAATTCTCGGCTTATAAAAAACAATAGCATTAAGGTC CTATAA
Protein sequence (LotjaGi2g1v0246500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPERAMDELNMNIAGEGPSGSYTPHKDNFNQQASPRSTLSPRSIQSSDSIDLAIDGVVDTSIEQLYYNVCEMRSSDQSPS RASFYSYGEESRIDSELGHLVGGILEITKEVVTENKEESNGNAAEKDIVSCGKEATKKDNNQSHSPSSRIIEGSAKSTPK SRNLRERPSTDKRSERSSRKGSLYPMRKHRSLALRGIIEERIATGLDNPDLGPFLLKQTRDMISSGENPQKALDLALRAL KSFEMCADGKPSLELVMCLHVLATIYCNLGQYNEAIPILERSIDIPVLEDGQDHALAKFAGCMQLGDTYAMMGNIENSIL FYTAGLEIQGQVLGETDPRFGETCRYVAEAHVQALQFDEAERLCQMALEIHRGNGNGSSASVEESADRRLMGLIYDSKGD YEAALEHYVLASMAMSANGQEQDVASVDSSIGDAYLALARYDEAVFSYQKALTVFKSTKGENHPNVASVYVRLADLYNKI GKFKDSKSYCENALRIFGKSKPGIPPEEIANGLIDVAAIYQSMNDLEKGLKLLKKALKIYGHAPGQQSTIAGIEAQMGVM YYMLGNYSDSYNIFKSAVAKFRASGEKKSALFGIALNQMGLACVQRYAINEAADLFEEARTILEKEYGQYHPDTLGVYSN LAGTYDAMGRVDDAIEILEFVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRNRKSKRSLETLLDANSRLIKNNSIKV L
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 720 | 720 | 0.0 | – | |
| MobiDBLite | 1 | 44 | 44 | - | – | |
| PANTHER | 1 | 720 | 720 | 0.0 | – | |
| MobiDBLite | 23 | 44 | 22 | - | – | |
| MobiDBLite | 134 | 185 | 52 | - | – | |
| MobiDBLite | 141 | 158 | 18 | - | – | |
| MobiDBLite | 159 | 182 | 24 | - | – | |
| Gene3D | 223 | 382 | 160 | 4.3E-20 | ||
| SUPERFAMILY | 253 | 406 | 154 | 5.25E-18 | ||
| ProSiteProfiles | 256 | 289 | 34 | 6.97 | ||
| SMART | 256 | 289 | 34 | 34.0 | ||
| ProSiteProfiles | 256 | 289 | 34 | 6.107 | ||
| Pfam | 256 | 285 | 30 | 1.9E-4 | – | |
| SMART | 299 | 332 | 34 | 9.2 | ||
| SMART | 341 | 374 | 34 | 14.0 | ||
| ProSiteProfiles | 385 | 668 | 284 | 16.873 | ||
| ProSiteProfiles | 385 | 418 | 34 | 5.9 | ||
| SMART | 385 | 418 | 34 | 37.0 | ||
| Gene3D | 388 | 554 | 167 | 4.0E-29 | ||
| Pfam | 423 | 497 | 75 | 1.9E-11 | – | |
| SMART | 425 | 458 | 34 | 1.5 | ||
| ProSiteProfiles | 425 | 458 | 34 | 9.175 | ||
| SUPERFAMILY | 430 | 576 | 147 | 5.06E-19 | ||
| ProSiteProfiles | 467 | 500 | 34 | 6.992 | ||
| SMART | 467 | 500 | 34 | 0.023 | ||
| ProSiteProfiles | 510 | 543 | 34 | 7.375 | ||
| SMART | 510 | 543 | 34 | 11.0 | ||
| SUPERFAMILY | 550 | 692 | 143 | 3.45E-15 | ||
| SMART | 551 | 584 | 34 | 28.0 | ||
| ProSiteProfiles | 551 | 584 | 34 | 6.372 | ||
| Gene3D | 555 | 721 | 167 | 1.8E-23 | ||
| SMART | 593 | 626 | 34 | 52.0 | ||
| ProSiteProfiles | 593 | 626 | 34 | 5.281 | ||
| Pfam | 594 | 659 | 66 | 1.5E-8 | – | |
| ProSiteProfiles | 635 | 668 | 34 | 6.549 | ||
| SMART | 635 | 668 | 34 | 74.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0246500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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