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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0292900 |
| Transcript ID | LotjaGi2g1v0292900.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dihydropteroate synthase, putative; TAIR: AT4G30000.1 Dihydropterin pyrophosphokinase / Dihydropteroate synthase; Swiss-Prot: sp|O04862|FOLM_PEA Folate synthesis bifunctional protein, mitochondrial; TrEMBL-Plants: tr|G7JY17|G7JY17_MEDTR Dihydropterin pyrophosphokinase/dihydropteroate synthase; Found in the gene: LotjaGi2g1v0292900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:76728809..76731687) extracted from Lotus japonicus Gifu genome v1.2.
GTGTTTTTCAGTGTATATATAGGGAGAGAGAACCTGGTAGGTAAAAGAAACTGTGGAAAAGAGAGACACGCCATGGGAAT GAGCTCAAGTTACAATCACTGATGAGTTCTTCTTGCTTCGGACATGTCAGAAAAACACTAGCTAAGGTTTGGCAGAGATA ACAGCTCAAGAGTTAGAGAGAGAGAGAGAAAGAAGGTGAAGGGTTTAACATGTCTCAAAACGACAAGGGTTTTAACGTAA AACGACATGAAGGGACTAAAACGTCATCGTTTGCGTCACGCTCGAATATTGGGAAAGACACACATATAGTTATTAATAAT AATCCCTATCACAACTCGAAAACTGTCGTGTCTCACCACGCGCCGCTAGTCTAGACGGCGAACGCCGCCGTGTCTCACTG CGCCGCGCCTCCACCAGTCACCGTTCAGTTAGAAGCACATTTGAATAAGGATTCAAGGATCCAAATCAGGTAATTTCAAT TGCAAAATCTATCTAAGTTCATCAACTTCATTGCTGATTAGTTTTTTTACCTTGTGATCAATTGCAGGTAGTGTATGTAT TGAATAATATCAATGCATCAGGTCTAGAGCTTTAGGATATTTGCTTCATATACATTTTGGAAAGCTCTCCTCAGATGTGT ATTCTGAAGTATCTAGGGGCTCCCAGGAATCAGCCTTCTGCTGCCAGAAAGTACCTTAAAGGTAAGTGTTCAAATGAACT CAATCAAACTGCTATATTGTGTATCAGTGAATCTAATGGTTGGTTGTTTTAGTAATAGTGAATTGGTTACCCAGATCAGT GAATTGGTTACCATCAATTGATACTTAGGGAGTGAATGGATTTAGGGGGTTTGTAGAATGCATTACTATATATAGTTGGT TATTTTAGTAATAAACTCTTTTAGCTTTCTGGGTCGTCGACGCTACCTAAACCGTGTATTTGTGTTACCATATGTTACCA TATCGAAACTAGAATGAAGGTTGCAGAGCTCATCATTTTTGGATAATCCAGTCATCACCAATCAGGCTTTCTTTGAACTT TTCTTTTCTTTTTTGCAGGATTGGGGTTTTCATCTCTTCACACAGCTCCAAATTCCTCTGTTGAACTTCACTCACAAGAT GAGGAAGTAGTGATTGCTTTGGGAAGTAATGTAGGTAATAGGCTCCTTAACTTTAAGGAAGCCTTGAAGATGATGAGAAA CTCAGGCATAAACATCACAAGACATGCTTGCCTTTACGAGACAGCACCAGCATATGTTACTGACCAACCTCGCTTTATCA ACTCCGCAGTAAGAGCTATTACCAAACTCGGGCCACATGAATTATTGGCTGCACTCAAACGAATTGAGAAGGACTTGGGC CGTACTGCTGGTATAAGGTATGGTCCAAGGCCAATTGATTTAGACATTTTATTCTATGGTAAATATAATGTCAGGTCTGA TACTCTCATTATACCTCATGAAAGAATTTGGGAAAGGCCATTTGTAATGGCCCCTTTGATGGATTTACTGGGATCAGCTA TTGACAATGATACAGTTGCTAGCTGGCATTCACTTTCAGGTCATTCTGGTGGACTATCTGCATTGTGGGAAAAATTAGGC GGTGAATCCCTTATTGGAGAGGAAGGTATGTATAGGGTGATGCCCTTTGCTAATGGCTTACTTGACTGGTCACGAAGAAC ATTGGTCATGGGGATCCTTAATTTGACTCCGGATAGTTTTAGTGATGGGGGAAATTTCCAGTCTGTGGAGTCTGCTGTGT CTCAGGTTCGGTTAATGATATCAGAGGGCGCAGATATGATTGATATTGGTGCTCAGTCTACTCGGCCGATGGCAACTAGG ATCTCTGTTGAAGAAGAATTAGATAGATTAATCCCTGTCCTGGAAGCTGTGATGTCAATGCCAGAGGTAGAAGGAAAGCT CATATCTATTGATACTTTCTACTCTGAAGTTGCTTCAGAAGCTGTGAGTAAAGGGGCTCATCTTATAAATGATGTATCTG CTGGGCAGTTAGATGCGAACATGTTTAAGGTCATGGCAGATCTTGATGTTCCTTATGTTGCGATGCACATGAGGGGGGAC CCATGTACAATGCAGAGTAGCGAAAACCTGAAATATGATAATGCGTGTAAGGAGGTATCCTCAGAATTATACTCACGGGT TAGAGAGGCAGAAATATCAGGAATCCCAGCATGGAGGATTATTATGGACCCTGGTATTGGATTCTCAAAGAAAACTGAAG ACAATTTAGATGTCCTCACAGGATTACATGATATCAGAACAGAGATTTCCAATAAAAGTATCGCGATCTCTCATGCTCCT ATGCTAATTGGACCCTCAAGAAAGAGATTCTTAGGCGAAATTTGCTCTCGTTCTGCTGCAGTTGAGAGGGATCCTGCTAC CATTGCTTCTGTCACAGCTGGTGTGTTGTCTGGGGCTAATATTGTTAGGGTGCATAATGTCAAAGACAATCTAGATGCGG TGAAGCTTTGCGATGCAATACTAAGACAGAGAAGTGCTCCCGTGAAATTTAGACAATGAATTTCAATTTGTCTTGCTTGG CCAGTTCTAGTGCTGATAAGTTTCGCCACGCTGCCCCTTTGTTCTGAATTTGGCTGTATGCAAAAATTCTGTTACAGTTC TTTCCGGTGTCAGAGCTAGCTTGCCTTGTGTTTAAAACTACCTGTTTAATAATTTAATAAGCAAGGATTGATCTATTATT GTATATGACAAAGATATATTAAGTTGCAAATGAGGGTTGGAATTAAATCTGTGAATCAAATACATCTCAAAGAATGAAAT AAATACGACACAGTTTAGAATTCAAAAATGGTAATTGAATGACAGTGATGTCAATTCAATGTACTACATGCTTCTTTGC
CDS sequence (LotjaGi2g1v0292900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGTATTCTGAAGTATCTAGGGGCTCCCAGGAATCAGCCTTCTGCTGCCAGAAAGTACCTTAAAGGATTGGGGTTTTC ATCTCTTCACACAGCTCCAAATTCCTCTGTTGAACTTCACTCACAAGATGAGGAAGTAGTGATTGCTTTGGGAAGTAATG TAGGTAATAGGCTCCTTAACTTTAAGGAAGCCTTGAAGATGATGAGAAACTCAGGCATAAACATCACAAGACATGCTTGC CTTTACGAGACAGCACCAGCATATGTTACTGACCAACCTCGCTTTATCAACTCCGCAGTAAGAGCTATTACCAAACTCGG GCCACATGAATTATTGGCTGCACTCAAACGAATTGAGAAGGACTTGGGCCGTACTGCTGGTATAAGGTATGGTCCAAGGC CAATTGATTTAGACATTTTATTCTATGGTAAATATAATGTCAGGTCTGATACTCTCATTATACCTCATGAAAGAATTTGG GAAAGGCCATTTGTAATGGCCCCTTTGATGGATTTACTGGGATCAGCTATTGACAATGATACAGTTGCTAGCTGGCATTC ACTTTCAGGTCATTCTGGTGGACTATCTGCATTGTGGGAAAAATTAGGCGGTGAATCCCTTATTGGAGAGGAAGGTATGT ATAGGGTGATGCCCTTTGCTAATGGCTTACTTGACTGGTCACGAAGAACATTGGTCATGGGGATCCTTAATTTGACTCCG GATAGTTTTAGTGATGGGGGAAATTTCCAGTCTGTGGAGTCTGCTGTGTCTCAGGTTCGGTTAATGATATCAGAGGGCGC AGATATGATTGATATTGGTGCTCAGTCTACTCGGCCGATGGCAACTAGGATCTCTGTTGAAGAAGAATTAGATAGATTAA TCCCTGTCCTGGAAGCTGTGATGTCAATGCCAGAGGTAGAAGGAAAGCTCATATCTATTGATACTTTCTACTCTGAAGTT GCTTCAGAAGCTGTGAGTAAAGGGGCTCATCTTATAAATGATGTATCTGCTGGGCAGTTAGATGCGAACATGTTTAAGGT CATGGCAGATCTTGATGTTCCTTATGTTGCGATGCACATGAGGGGGGACCCATGTACAATGCAGAGTAGCGAAAACCTGA AATATGATAATGCGTGTAAGGAGGTATCCTCAGAATTATACTCACGGGTTAGAGAGGCAGAAATATCAGGAATCCCAGCA TGGAGGATTATTATGGACCCTGGTATTGGATTCTCAAAGAAAACTGAAGACAATTTAGATGTCCTCACAGGATTACATGA TATCAGAACAGAGATTTCCAATAAAAGTATCGCGATCTCTCATGCTCCTATGCTAATTGGACCCTCAAGAAAGAGATTCT TAGGCGAAATTTGCTCTCGTTCTGCTGCAGTTGAGAGGGATCCTGCTACCATTGCTTCTGTCACAGCTGGTGTGTTGTCT GGGGCTAATATTGTTAGGGTGCATAATGTCAAAGACAATCTAGATGCGGTGAAGCTTTGCGATGCAATACTAAGACAGAG AAGTGCTCCCGTGAAATTTAGACAATGA
Protein sequence (LotjaGi2g1v0292900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCILKYLGAPRNQPSAARKYLKGLGFSSLHTAPNSSVELHSQDEEVVIALGSNVGNRLLNFKEALKMMRNSGINITRHAC LYETAPAYVTDQPRFINSAVRAITKLGPHELLAALKRIEKDLGRTAGIRYGPRPIDLDILFYGKYNVRSDTLIIPHERIW ERPFVMAPLMDLLGSAIDNDTVASWHSLSGHSGGLSALWEKLGGESLIGEEGMYRVMPFANGLLDWSRRTLVMGILNLTP DSFSDGGNFQSVESAVSQVRLMISEGADMIDIGAQSTRPMATRISVEEELDRLIPVLEAVMSMPEVEGKLISIDTFYSEV ASEAVSKGAHLINDVSAGQLDANMFKVMADLDVPYVAMHMRGDPCTMQSSENLKYDNACKEVSSELYSRVREAEISGIPA WRIIMDPGIGFSKKTEDNLDVLTGLHDIRTEISNKSIAISHAPMLIGPSRKRFLGEICSRSAAVERDPATIASVTAGVLS GANIVRVHNVKDNLDAVKLCDAILRQRSAPVKFRQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 40 | 507 | 468 | 1.7E-218 | – | |
| PANTHER | 40 | 507 | 468 | 1.7E-218 | – | |
| Gene3D | 43 | 191 | 149 | 8.8E-47 | ||
| CDD | 46 | 172 | 127 | 1.04591E-59 | ||
| TIGRFAM | 46 | 172 | 127 | 1.5E-35 | ||
| SUPERFAMILY | 46 | 179 | 134 | 4.58E-42 | ||
| Pfam | 47 | 172 | 126 | 1.8E-32 | ||
| ProSitePatterns | 129 | 140 | 12 | - | ||
| Gene3D | 213 | 509 | 297 | 5.1E-104 | ||
| SUPERFAMILY | 219 | 506 | 288 | 1.31E-85 | ||
| CDD | 230 | 501 | 272 | 5.9202E-121 | ||
| ProSiteProfiles | 230 | 498 | 269 | 73.805 | ||
| TIGRFAM | 232 | 502 | 271 | 1.1E-83 | ||
| ProSitePatterns | 232 | 247 | 16 | - | ||
| Pfam | 233 | 488 | 256 | 1.6E-83 | ||
| ProSitePatterns | 266 | 279 | 14 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity | Catalysis of the reaction: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine + ATP = (2-amino-4-hydroxy-7,8-dihydropteridin-6-yl)methyl diphosphate + AMP + 2 H(+). | ||
| Molecular function | Dihydropteroate synthase activity | Catalysis of the reaction: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate + 4-aminobenzoate = diphosphate + dihydropteroate. | ||
| Biological process | Folic acid-containing compound biosynthetic process | The chemical reactions and pathways resulting in the formation of folic acid and its derivatives. | ||
| Biological process | Pteridine-containing compound metabolic process | The chemical reactions and pathways involving any compound containing pteridine (pyrazino(2,3-dipyrimidine)), e.g. pteroic acid, xanthopterin and folic acid. | ||
| Biological process | Cellular metabolic process | The chemical reactions and pathways by which individual cells transform chemical substances. |
Expression pattern of LotjaGi2g1v0292900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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