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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0372000 |
| Transcript ID | LotjaGi2g1v0372000.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 70 kDa heat shock protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|A0A0R4J4D6|A0A0R4J4D6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0372000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:86876892..86879268) extracted from Lotus japonicus Gifu genome v1.2.
TCAATTAGCATGGCTGGTAAAGGTGAAGGTCCGGCGATCGGAATCGATCTCGGAACGACGTACTCCTGCGTCGGCGTTTG GCAGCATGATCGTGTTGAAATCATAGCTAACGATCAGGGTAACAGGACTACTCCGTCCTATGTCGCTTTCACAGATACTG AGCGGTTGATCGGAGATGCCGCCAAGAACCAGGTCGCTATGAACCCTACCAACACTGTTTTCGGTAAGTCCTAGTTCTTT CTCTTCCACATTGCTCTTCTGCAATTCCATTGAGTCTGTTAAATTTTTTATTATTATGATTTTGATTTTATTTTATGATA ATTTAGGAAATTATGAGACGTTGTAGATTTATAATTGTTATGTGGTTTGATCGTGTATCTGTAGTTCTGTACAAATTGAT TTTCTCCAATTTTACTCTGTTTCAGTGATTCTATAGCTCACAAATGCATTCAATATTGTTGTGAATTTTGCAGTTTGTTT ATGTGCTAGCTAGTAGTTATGAGATTTGATTGTGCTTCTTAATTAGAGTTTGAATTGCAGCTTCCAATTCATTGTTATGA TGCTTTTTTTAACTGAGTGAAAAATTTGGTGTTGTGTATGGTTTTGGTGATGATGTTGGTTTGATTTTGCGTGTGCAGAT GCTAAGCGTTTGATTGGAAGGAGGTTCAGCGATACTTCAGTGCAGGGTGACATGAAATTGTGGCCATTCAAGGTGATTCC AGGCCCTGCTGACAAGCCAATGATTGGGGTGAATTACAAAGGAGAGGAGAAGCAGTTTTCTGCAGAGGAGATATCTTCAA TGGTTCTCATGAAGATGAAGGAGATTGCGGAGGCGTATCTTGGTACAACGATTAAGAACGCGGTGGTTACTGTGCCGGCT TACTTCAACGACTCTCAGAGGCAAGCTACCAAGGATGCTGGTGTGATTTCTGGGCTCAATGTGATGCGAATCATCAACGA GCCTACCGCGGCGGCGATTGCGTATGGGCTTGATAAGAAAGCCACCAGCACCGGGGAGAAGAATGTTCTGATTTTCGATC TCGGTGGTGGGACTTTTGATGTTTCGCTTCTCACCATTGAGGAAGGTATCTTTGAGGTGAAATCCACTGCTGGTGATACT CATTTAGGGGGTGAGGATTTTGATAACAGAATGGTGAACCATTTTGTTCAGGAGTTTAAGAGGAAGAACAAGAAGGATAT TAGTGGAAATGCCAGGGCTCTTAGGAGGTTGAGAACAGCTTGTGAGAGGGCCAAGAGGACTCTGTCATCCACTGCTCAAA CCACCATTGAGATTGATTCGTTGTATGAAGGAATTGACTTTTACACCACCATTACTCGTGCTAGATTTGAAGAGCTGAAC ATGGATTTGTTCAGGAAGTGTATGGAGCCTGTGGAGAAGTGTTTGAGGGATGCAAAGATGGACAAGAGTACAATCCATGA TGTTGTTCTTGTTGGTGGGTCAACAAGGATTCCCAAGGTTCAGCAGTTGTTGCAGGACTTTTTCAATGGGAAGGAGCTTT GCAAGAGCATTAACCCGGATGAGGCTGTTGCTTATGGTGCTGCAGTTCAGGCTGCGATTTTGAGCGGTGAGGGCAATGAG AAAGTGCAGGATCTTCTCTTGCTTGATGTCACTCCACTTTCACTTGGATTGGAAACTGCTGGAGGGGTCATGACTGTGTT GATTCCCAGAAACACAACTATTCCCACCAAGAAGGAGCAAGTTTTTTCAACCTACTCTGATAACCAACCTGGTGTTTTGA TTCAGGTCTATGAAGGTGAACGAACAAGGACTCGTGATAACAATTTGCTTGGTAAATTTGAGCTCTCTGGAATCCCTCCA GCTCCAAGGGGTGTTCCACAAATCACTGTCTGCTTCGACATCGACGCGAATGGTATCTTGAATGTGTCCGCGGAGGACAA AACAACTGGACAGAAGAACAAGATCACAATTACAAACGACAAGGGGAGGCTTTCGAAGGAGGAGATTGAGAAGATGGTGC AGGAAGCTGAGAAGTACAAGTCCGAGGACGAGGAGCACAAGAAGAAAGTGGAGGCTAAGAATGCTCTGGAGAATTATGCC TACAACATGAGGAACACGATCAAGGATGATAAGATTGCTTCCAAGTTGTCAGCGGATGATAAGAAGAAGATTGAGGATGC GATTGACCAGGCTATCCAATGGCTCGATGGGAACCAACTTGCTGAGGCTGATGAATTTGAGGACAAGATGAAGGAGTTGG AGACCATTTGCAATCCCATCATTGCTAAGATGTACCAAGGTGCAGGTGCTGATGTGGGTGGTGGAGCCATGGATGAGGAT GGTCCTCCTGCTGGCAGTGGAAGTGGTGCTGGACCCAAGATTGAGGAAGTCGATTAA
CDS sequence (LotjaGi2g1v0372000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGGTAAAGGTGAAGGTCCGGCGATCGGAATCGATCTCGGAACGACGTACTCCTGCGTCGGCGTTTGGCAGCATGA TCGTGTTGAAATCATAGCTAACGATCAGGGTAACAGGACTACTCCGTCCTATGTCGCTTTCACAGATACTGAGCGGTTGA TCGGAGATGCCGCCAAGAACCAGGTCGCTATGAACCCTACCAACACTGTTTTCGATGCTAAGCGTTTGATTGGAAGGAGG TTCAGCGATACTTCAGTGCAGGGTGACATGAAATTGTGGCCATTCAAGGTGATTCCAGGCCCTGCTGACAAGCCAATGAT TGGGGTGAATTACAAAGGAGAGGAGAAGCAGTTTTCTGCAGAGGAGATATCTTCAATGGTTCTCATGAAGATGAAGGAGA TTGCGGAGGCGTATCTTGGTACAACGATTAAGAACGCGGTGGTTACTGTGCCGGCTTACTTCAACGACTCTCAGAGGCAA GCTACCAAGGATGCTGGTGTGATTTCTGGGCTCAATGTGATGCGAATCATCAACGAGCCTACCGCGGCGGCGATTGCGTA TGGGCTTGATAAGAAAGCCACCAGCACCGGGGAGAAGAATGTTCTGATTTTCGATCTCGGTGGTGGGACTTTTGATGTTT CGCTTCTCACCATTGAGGAAGGTATCTTTGAGGTGAAATCCACTGCTGGTGATACTCATTTAGGGGGTGAGGATTTTGAT AACAGAATGGTGAACCATTTTGTTCAGGAGTTTAAGAGGAAGAACAAGAAGGATATTAGTGGAAATGCCAGGGCTCTTAG GAGGTTGAGAACAGCTTGTGAGAGGTTTTACACCACCATTACTCGTGCTAGATTTGAAGAGCTGAACATGGATTTGTTCA GGAAGTGTATGGAGCCTGTGGAGAAGTGTTTGAGGGATGCAAAGATGGACAAGAGTACAATCCATGATGTTGTTCTTGTT GGTGGGTCAACAAGGATTCCCAAGGTTCAGCAGTTGTTGCAGGACTTTTTCAATGGGAAGGAGCTTTGCAAGAGCATTAA CCCGGATGAGGCTGTTGCTTATGGTGCTGCAGTTCAGGCTGCGATTTTGAGCGGTGAGGGCAATGAGAAAGTGCAGGATC TTCTCTTGCTTGATGTCACTCCACTTTCACTTGGATTGGAAACTGCTGGAGGGGTCATGACTGTGTTGATTCCCAGAAAC ACAACTATTCCCACCAAGAAGGAGCAAGTTTTTTCAACCTACTCTGATAACCAACCTGGTGTTTTGATTCAGGTCTATGA AGGTGAACGAACAAGGACTCGTGATAACAATTTGCTTGGTAAATTTGAGCTCTCTGGAATCCCTCCAGCTCCAAGGGGTG TTCCACAAATCACTGTCTGCTTCGACATCGACGCGAATGGTATCTTGAATGTGTCCGCGGAGGACAAAACAACTGGACAG AAGAACAAGATCACAATTACAAACGACAAGGGGAGGCTTTCGAAGGAGGAGATTGAGAAGATGGTGCAGGAAGCTGAGAA GTACAAGTCCGAGGACGAGGAGCACAAGAAGAAAGTGGAGGCTAAGAATGCTCTGGAGAATTATGCCTACAACATGAGGA ACACGATCAAGGATGATAAGATTGCTTCCAAGTTGTCAGCGGATGATAAGAAGAAGATTGAGGATGCGATTGACCAGGCT ATCCAATGGCTCGATGGGAACCAACTTGCTGAGGCTGATGAATTTGAGGACAAGATGAAGGAGTTGGAGACCATTTGCAA TCCCATCATTGCTAAGATGTACCAAGGTGCAGGTGCTGATGTGGGTGGTGGAGCCATGGATGAGGATGGTCCTCCTGCTG GCAGTGGAAGTGGTGCTGGACCCAAGATTGAGGAAGTCGATTAA
Protein sequence (LotjaGi2g1v0372000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRR FSDTSVQGDMKLWPFKVIPGPADKPMIGVNYKGEEKQFSAEEISSMVLMKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQ ATKDAGVISGLNVMRIINEPTAAAIAYGLDKKATSTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFD NRMVNHFVQEFKRKNKKDISGNARALRRLRTACERFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTIHDVVLV GGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRN TTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQ KNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDDKIASKLSADDKKKIEDAIDQA IQWLDGNQLAEADEFEDKMKELETICNPIIAKMYQGAGADVGGGAMDEDGPPAGSGSGAGPKIEEVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 275 | 272 | 0.0 | ||
| PANTHER | 4 | 275 | 272 | 0.0 | – | |
| SUPERFAMILY | 8 | 191 | 184 | 3.11E-69 | ||
| PRINTS | 8 | 21 | 14 | 1.8E-81 | – | |
| CDD | 9 | 364 | 356 | 0.0 | – | |
| Pfam | 9 | 275 | 267 | 6.9E-130 | ||
| Gene3D | 10 | 191 | 182 | 3.7E-122 | – | |
| ProSitePatterns | 12 | 19 | 8 | - | ||
| PRINTS | 36 | 48 | 13 | 1.8E-81 | – | |
| PRINTS | 58 | 66 | 9 | 1.8E-81 | – | |
| Gene3D | 71 | 126 | 56 | 3.7E-122 | – | |
| PRINTS | 146 | 166 | 21 | 1.8E-81 | – | |
| Gene3D | 192 | 234 | 43 | 3.7E-122 | – | |
| SUPERFAMILY | 196 | 365 | 170 | 1.94E-58 | ||
| ProSitePatterns | 203 | 216 | 14 | - | ||
| Gene3D | 235 | 275 | 41 | 3.7E-122 | – | |
| PANTHER | 276 | 605 | 330 | 0.0 | ||
| Gene3D | 276 | 289 | 14 | 1.5E-36 | – | |
| PANTHER | 276 | 605 | 330 | 0.0 | – | |
| Pfam | 278 | 595 | 318 | 3.1E-118 | ||
| Gene3D | 290 | 348 | 59 | 1.5E-36 | – | |
| PRINTS | 314 | 330 | 17 | 1.8E-81 | – | |
| ProSitePatterns | 317 | 331 | 15 | - | ||
| PRINTS | 346 | 366 | 21 | 1.8E-81 | – | |
| Gene3D | 349 | 361 | 13 | 1.5E-36 | – | |
| Gene3D | 364 | 492 | 129 | 2.7E-64 | ||
| SUPERFAMILY | 369 | 526 | 158 | 3.14E-65 | ||
| PRINTS | 373 | 392 | 20 | 1.8E-81 | – | |
| PRINTS | 454 | 470 | 17 | 1.8E-81 | – | |
| Gene3D | 493 | 596 | 104 | 8.3E-41 | ||
| Coils | 498 | 518 | 21 | - | – | |
| SUPERFAMILY | 520 | 599 | 80 | 7.85E-31 | ||
| MobiDBLite | 598 | 627 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0372000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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