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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0379100 |
| Transcript ID | LotjaGi2g1v0379100.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein MID1-COMPLEMENTING ACTIVITY 1; TAIR: AT4G35920.1 PLAC8 family protein; Swiss-Prot: sp|Q8L7E9|MCAC1_ARATH Protein MID1-COMPLEMENTING ACTIVITY 1; TrEMBL-Plants: tr|I1LI39|I1LI39_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0379100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:87589724..87596288) extracted from Lotus japonicus Gifu genome v1.2.
ATTATCACTCATCAGCACATGCGGCCAAGCACGGCACTGCAAATTACAGCACCGAACCGAAACTCTAACTCTGTGTGAGA GAAGGAGTAGTGATAAAGAGAGAGAGAGAGAGAGAGACAAAGAGTGTGATTCACAAGAACAAGAAGAAAAAAGCTCCTTC AATTCCCGCAATTCCAATGCCTGCCACCACTTGAATTCTCTGCTCCTTTCCCGTAACTTCAACTTTGCCTTCACGTAAGT AAACACCACCACCATTTCACAAACCAAATCCCAAATCAAAATTATCAACGATTCTCCTGCATTTTTCTGAACCTGGTCAT GGATTATTTCCCTTAATTTTTGCTTAATTAAAATATTTTTTTAATCCTGCATTCTAACATGCAGTTACTGTTTTTTTTGT TTTTCTTTAATTAAAAGTCACTTTAAAAAACATAGAATGATTTACTAGATTTTAATGTAGTTTAATTATAGATTTCTAGC TGAGAAGCATTTCTTCAGTTTCATGATTTTTTGTTTCAGTTTTTTTTTGTTATTTTGTTGACTGATTTTATTTGGTTTTG TTTTGCAGTCCCTCTGATTCTGAATATCCAAGATCCTGGACAATAATGCTGTCTCTGAAAAACATGTTCCAGAGAAATGC TTGATCTGGCCTGAAATCTTCCATTCTTAGGATTTTTCAGCTTTGTTTGGGAGGTAATTATATATTTTTTTAATTGTAAT TTATTTTAATTTAATGATGAAATTGAGGATGAAAATTCATTTTTGGAAATTGATGTTTTGAGCTGATATAGTTTAATTTT GAGGTTTGATTTTTCAGGGAAAATGGCATCATGGGATCATATGGGGGATTTTGCAAATATAGCCCAGTTGACTGGGGTGG ATGCTGTGAAGTTGATTGGGATGATTGTGAAAGCTGCAAGCACTGCAAGGATGCACAAGAAAAACTGCAGGCAATTTGCA CAGCATTTGAAGTTGATTGGGAACTTGCTTGAGCAGCTCAAGATCTCTGAGCTCAAGAGGTACCCGGAGACCAGGGAACC GCTGGAGCAGCTGGAAGATGCTCTTAGGAGGTCTTATATGCTGGTGAATAGTTGTCAGGACCGGAGCTACCTTTATTTGA TGGCTATGGGCTGGAACATTGTTTATCAGTTCAGGAAGGCGCAGAATGAAATTGACAGATACCTGCGTCTAGTTCCTCTC ATTACTCTCGTCGACAATGCTCGAGTCAGGGTATATGTTCTTCTTCACTCTGCTCAATTATCTGCTATGTGCATTTTTTG GAATTCTACTATAATTGATTTTGAAGCTAAAATCAATTTGGATAGAAGCTTCTGAGTGCGAGAGTTGATTTTGAGAAAAA AGTAGCTTATGAAACATGCTAATATCTTTTTGTGAATGGTCTTTTCAGTGTTGACCAACAGGAAAAAAAAATAGAGTGAA AAGTTTGTGGTTTATGACTGATTGAATTGTTCGTTCGACGTTTTGGATACTACTGATCAACCAATTGGCATTTTACTCCA ATTCTAACCTTGATTGTTTACATAGCCTTCTTTGTATAGAATATTCTGATTTTCTATATGCCCACTTTTGGTAGAAGATT TGGGCTACAGGAACTAAATTGTCCTGAACATGTTATCCAGCACATTTCACTTATTTGCTAGATAGAACAGAGTTTTTTCA CTGAGTGGTTGGTTACTTGATTCTGCTACCGCGTTGAGATGTTAGTGCGGTGCATTGGAAGTTTGAAATCCTGGTTTGTC AAATTTAGTGCTCTATGCTGGTGAGGTGCATGTGCTGAATATTTGCAGTCAGCTAACCACATTAAGTGGTTTAGTTTGAT ACTAGATACAATTCAGAAAAAAAAAAGCTCGTATGCTTAAATGAGTGAAAAATTAGTTTCAAACATCTCTTTATAAGGAT CCATTTATCTTAGGAACTTGTTCAAATTGCACTTAGCTGAATACTCTTTTTTGAAACTCGAAGTATTAAGATTCATATTC AAGTCACTCACCTAAGGAAATGGATCCTGTCTCTTCATTTTTTGCACAATTAACAAGTAAGCATTTAATATAAAATAGGA TTCTACTTATAGTCCGGATTCACACAATTGATACGGTTTAGCTGCATCATTGCGATCCTTTAGATAGGGCTGTGTTCTGG TTTTACTTTTACATCAGTTTTTTTATCAGCAGCACTTCACAAACAGGAAGTAGCCCAAATTGTCTGCCACAGAGCAATAA ATCACATCCTTGTTCCTTTTCATCATGTTTGTGAGTACGTGTCCGCGCGCGCAGGCATGTGAGAATGTTATAGAAATAGA AGTTGCGGCATTTTGTTTCTGAATTTTGCATATTTCCCAATATATTTGAGGACTTCAAACTGTGTTGCATTGTCACTTTA GTTGCAACATCTACATCTCTAAATTTGTCTAAATATGGTTGACAACTGGATTACTTTGGAATATACAGGAGAGACTTGAA GTTATTGAAATGGATCAACGTGAATACACATTGGATGATGATGACCAACAGGCACAGACAGTTATTTTAAAACCTGAACC TGACAAAGATGACACTGCAATGCTGAAGAAAACTCTTTCCTGTTCTTACCCCAATTGTTCTTTCACTGAAGCGCTCAAAA AAGAAAATGAAAAGCTTAAACTAGAACTACAACGGTCACAAGCAAATTTGGATATGAATCAGTGTGAAGTCATTCAACGT TTATTAGAAGTCACCGAAGTTGCATCTTATTCTGTTCCAGAGAAATGTTCATCTGAAAAAAGTCATAAGAAAGAGGAGTA CAATTACTCTGACGCTAATGGTGAAAAGGTTCATTCATCTGATGAAAAATACCATGCAAAAGTTGACACTGTTTCACCAT CGAGGTAGTATATTTCCCTCTTCCTCAATTTCAATGTGTTCTAGGTTCACTCGGGGGGATAACTAGTTGAGAAAAAATCA GAATATTTATGTGAATAATGAGCCATACAATTCTGACATCTAGGAAGATCCAAAGTTTACCCTTAGTTTTAACTATGATA TTCCTGTTTCTTCCATCGGTTGGTAACATCAGCATGCAGTCCATACTTCATAATTGTTCTATTTTATAAATTTATCTGTT CTGCCATTTTGGTTACTAACTAAATTTGAACGAGTCTGATGCTTATATGCCTGACCTCAAACAGATTTTCTGTTTCACGA AAGGATCTGCAATCAAATGGAGGTTCATATCACCAGGAAGATTGGCACACTGATTTACTTGCTTGTTGTTCTGAACCTTC TCTTTGTATGTTCTCTCCTTTAGCTTTGTTTGGCTGTAATAGAATAGTATATTCACCTACGATGTTTATTACCTGTACTA CATCTATAGCCTTACTAAAGGGAATGCCTTTCCTTGTGCATTTCCATTGTGTTAGTGGGACTAGCTTGTAACCCTTAATT ACTTTACTAGGCATGATGCTCAGAACACAAGTCACATATCAGTATTACATGGTGCCATTATCTTGAGGTTTATTCTGCAT CTTTTTATAAAGCTATCATATAGGTGCCATGGCTGTGTTGAGGTGGGAACCTTTCCTGTACAGGCATCAGGGATCTATTC AATTTAAAGATTAGTATAATGTAGCTATTGTTAGAAGTCCCACATTGGCTAGAGATAGAGCATAGATAGCCTTTATAAGG GTAGTGCAAACCTCAACTCTTGAGCTAGCTTTTGTGGTTGAGTATAGGCCTCCCAATTTCTAATATGGTATCAGAGCCTA TCCTAGATCCATTTGTTGTTTGTTGTGGAGACTTCCCATATTCGGGGCACCCGTTGTTGTTGATCCCACGTTCCAGGTTG TTCAGTCCTGGACGTGAGGGGGTGTGTTAGAAGTCCCACATTGGCTAGAGATAGAGCATAGATAGCCTTTATAAGGGTAG TGCAAACCTCAACTCTTGAGCTAGCTTTTGTGGTTGAGTATAGGCCTCCCGATTTCTAATAGCTATGATTTTCTATCTTT TTGACCAAATTTCAATTGCCTCAAGTTGCCCACATTACATGTGTTTGTGGTCTGTAGATAAGTTAGATATTCTGTTCGAC ACTTGGTGGGATGAAAAAGACGCTACATGAGAATTAGGAAGAAAATTAGTAGATAGGATAGATGTGGCTTGCGTGATTTC ATGGAATAAAATGAATGCATGTTGAATCAGGAAGTAGGATGAATTTATTTTTCTGTGAATCTTGAATGAGACTGGACGCT GGTACCTATTAGTGGTAATGGTGGAAGCTGTTTTTCTATTTGCTCTTACCTGACATGCTAAGTCATGCATGAATAGTTGT GAAGGGATAATCCCATTGAGCATAAAAATCCTTAAAAGAATTTTTTTAGTGAGGACAAGATGATCAGGAGTTCAGGACTT CAGAAGCTAAATATTACATTCTCATTTAATGGCAGAAAACCCAGAGAATATTACAAATAAAAATTAAATCAGCTAAGTAG AGCTTCCAGTTCCTCCATACTTCTCATTCCAAATATATATTTGACCTGCAGGTATGAAGACATTCTTCTATCCTTGTGGA ACATTTTCAAAGATTGCTAGTGTTGCAAAAAACAGACCCATATGTAAGTTAGTTATAATGAATTGTGTTAGCATTAAAGT GATGAGTCTATATCTGAGTAGTGTTTCTTGCAAACAAAGGCAGAATTTATGTAAATCAAGTTGATATTGATATTAACATT ATACTATCCCTTAGATTTGGTACCTTAGTAAATATCTTTAATATCTTGAGATTAACTTTTCTCTTTTTTATGTTCGGGAG ACCAAGTGGAGTGATATGTCTTGAACTTACCAATAATGAAGATGTGATTTTCTGTGATTCAGACCCTTTCTATAACTTAT GAGTTATTGTCAAGGGTTCTTTAAATTGCAAATACTTTTTGCTGCTTATAATGCTTACCTTCAATCTGATTATTTGAAAC ACTAAAAACATTATCAAGGTCCTGCTATTATGATTTCAGTTGTGTTTTTTCAGCCTCTGGCGAAGCATGTAATGAATTGA TGGCATATTCATTAATTTTGTCTTGCTGTTGCTATACTTGCTGCGTAAGGAGAAAGCTTCGGAAGATGCTGAACATCACA GTAATGCTTCTTTCCTTCTCTACATAAATATGACTTCTCATCATCCTCTCTTTTTGTGCTTTGTATTTGTGGATTTTTAG ATATTGTTAGGTTCAATTGAGGGTGCAGATCACATATAGAGCTTTCTCTGGTAGCATTCTTAATTGTGATATGTCTCAAG TATTCCTTTTTTTTCTGAGGGATGTATTCCTTCATCCAAACTTTTTTTGTAAGCATGTGATAGCAGTTGGCTGCCAGCTC ATCAGTTTTATTAATCCTTTTTTAAGCAACTAATACCAACTCTTATTATTTCAAAGTAGATTCTATTTGTCCAATTTTCA AGGCAAGTTGAAAAAATATAGATAATGTATTTGCTGGTCTCACCAAATGTTTTACTACTATCAATTACTTCTATGCTAGG GCGGCTTTGTTGATGATTTTCTCTCTCATTTGATGTGTTGCTGCTGTGCCCTTGTGCAAGAATGGAGAGAAGTGGAGATC CGTGGGGCTAATGGTATGTTTTCCTATTGGGAATTTCCTCTTATTCAAATTACCATTTCGCCTTTCACGTGTCTCAATCT TGTCTTTCCTTTTCCCTGCAAAACCTGTTGAGTAGGATCTAGCCTGTTGTTCTTGTTGCAAATTTCTATTTTACTATGGC ACTTGACTGAATGTGAATTAACTAGCGAGTTCCATTTGCTGAATGTGCTTTGGGGTGCCTTGAAAACTGGGAAAGTGGCA TTGCAACACAAAAACAAACCCATACTAAATCATTCTTATCTTGTGATCAAATTGCATGCAAAAACGTTTAATGTTAAACC ATTTTGCAGCTTCTGAGAAGACCAGAACAAGCCCTCCAACCTCCCAGTACATGGAATCTTAAGTAAGAAATGAGATTGTC ATTTGGTTACTTAGAGATTCAAGGGTCCTTGAACTTGAAGAAATATTAAATAGAGGCTGTTGACTACTGGAATTCTTGAA GGAGGCAGGAACTATGTAGTTTGATTCTTACCGCACCTGGCCTTTATTTAACTATGTACAGTAATTTATTTCGCTGTACT CAGAAAAAAGTAGCTTCTAGATTTAGCTGGTGTATCATAAACTAATATTTTGTTTTCCTGGTTTAATATAGTTTGAGTTA ATTTATTGGCATGTTTTGTCATGGATCTTTTTGTTGGACTTTCTCTAATTCATTAGACACAGTTTAACGAGCTCTAGGGT TTTCTGATTTGGGATGGAAGATATTGCTTGCGCAGGACATCCTCATTACTAACATCCATGTTTGTGAATTTTGTTCAATT GTTTTCTTGGGGAAGGAGTGAAACTTGTCCCTATTTCTGGGTTCCTTCCCTATTTCCTTAGGGCCCGTTTGGTGACCAGG ATAGGATAGGACAGGATAATAATCATATCCTGTTGTTATTTGTTGTTTGTTGCACCAGCAGGATATGATAACACTATCCT GTCTT
CDS sequence (LotjaGi2g1v0379100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCATGGGATCATATGGGGGATTTTGCAAATATAGCCCAGTTGACTGGGGTGGATGCTGTGAAGTTGATTGGGAT GATTGTGAAAGCTGCAAGCACTGCAAGGATGCACAAGAAAAACTGCAGGCAATTTGCACAGCATTTGAAGTTGATTGGGA ACTTGCTTGAGCAGCTCAAGATCTCTGAGCTCAAGAGGTACCCGGAGACCAGGGAACCGCTGGAGCAGCTGGAAGATGCT CTTAGGAGGTCTTATATGCTGGTGAATAGTTGTCAGGACCGGAGCTACCTTTATTTGATGGCTATGGGCTGGAACATTGT TTATCAGTTCAGGAAGGCGCAGAATGAAATTGACAGATACCTGCGTCTAGTTCCTCTCATTACTCTCGTCGACAATGCTC GAGTCAGGGAGAGACTTGAAGTTATTGAAATGGATCAACGTGAATACACATTGGATGATGATGACCAACAGGCACAGACA GTTATTTTAAAACCTGAACCTGACAAAGATGACACTGCAATGCTGAAGAAAACTCTTTCCTGTTCTTACCCCAATTGTTC TTTCACTGAAGCGCTCAAAAAAGAAAATGAAAAGCTTAAACTAGAACTACAACGGTCACAAGCAAATTTGGATATGAATC AGTGTGAAGTCATTCAACGTTTATTAGAAGTCACCGAAGTTGCATCTTATTCTGTTCCAGAGAAATGTTCATCTGAAAAA AGTCATAAGAAAGAGGAGTACAATTACTCTGACGCTAATGGTGAAAAGGTTCATTCATCTGATGAAAAATACCATGCAAA AGTTGACACTGTTTCACCATCGAGATTTTCTGTTTCACGAAAGGATCTGCAATCAAATGGAGGTTCATATCACCAGGAAG ATTGGCACACTGATTTACTTGCTTGTTGTTCTGAACCTTCTCTTTGTATGAAGACATTCTTCTATCCTTGTGGAACATTT TCAAAGATTGCTAGTGTTGCAAAAAACAGACCCATATCCTCTGGCGAAGCATGTAATGAATTGATGGCATATTCATTAAT TTTGTCTTGCTGTTGCTATACTTGCTGCGTAAGGAGAAAGCTTCGGAAGATGCTGAACATCACAGGCGGCTTTGTTGATG ATTTTCTCTCTCATTTGATGTGTTGCTGCTGTGCCCTTGTGCAAGAATGGAGAGAAGTGGAGATCCGTGGGGCTAATGCT TCTGAGAAGACCAGAACAAGCCCTCCAACCTCCCAGTACATGGAATCTTAA
Protein sequence (LotjaGi2g1v0379100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASWDHMGDFANIAQLTGVDAVKLIGMIVKAASTARMHKKNCRQFAQHLKLIGNLLEQLKISELKRYPETREPLEQLEDA LRRSYMLVNSCQDRSYLYLMAMGWNIVYQFRKAQNEIDRYLRLVPLITLVDNARVRERLEVIEMDQREYTLDDDDQQAQT VILKPEPDKDDTAMLKKTLSCSYPNCSFTEALKKENEKLKLELQRSQANLDMNQCEVIQRLLEVTEVASYSVPEKCSSEK SHKKEEYNYSDANGEKVHSSDEKYHAKVDTVSPSRFSVSRKDLQSNGGSYHQEDWHTDLLACCSEPSLCMKTFFYPCGTF SKIASVAKNRPISSGEACNELMAYSLILSCCCYTCCVRRKLRKMLNITGGFVDDFLSHLMCCCCALVQEWREVEIRGANA SEKTRTSPPTSQYMES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 416 | 416 | 5.7E-283 | – | |
| Phobius | 1 | 340 | 340 | - | – | |
| PANTHER | 1 | 416 | 416 | 5.7E-283 | – | |
| Gene3D | 15 | 128 | 114 | 4.8E-5 | ||
| Coils | 189 | 216 | 28 | - | – | |
| TIGRFAM | 294 | 394 | 101 | 2.5E-24 | ||
| Pfam | 295 | 392 | 98 | 9.1E-16 | ||
| Phobius | 341 | 357 | 17 | - | – | |
| Phobius | 358 | 416 | 59 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cell surface receptor signaling pathway | A series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription. |
Expression pattern of LotjaGi2g1v0379100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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