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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0379100 |
| Transcript ID | LotjaGi2g1v0379100.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein MID1-COMPLEMENTING ACTIVITY 1; TAIR: AT4G35920.1 PLAC8 family protein; Swiss-Prot: sp|Q8L7E9|MCAC1_ARATH Protein MID1-COMPLEMENTING ACTIVITY 1; TrEMBL-Plants: tr|A0A151THS6|A0A151THS6_CAJCA Uncharacterized protein family; Found in the gene: LotjaGi2g1v0379100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:87590403..87595466) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCATCATGGGATCATATGGGGGATTTTGCAAATATAGCCCAGTTGACTGGGGTGGATGCTGTGAAGTTGATTGGGAT GATTGTGAAAGCTGCAAGCACTGCAAGGATGCACAAGAAAAACTGCAGGCAATTTGCACAGCATTTGAAGTTGATTGGGA ACTTGCTTGAGCAGCTCAAGATCTCTGAGCTCAAGAGGTACCCGGAGACCAGGGAACCGCTGGAGCAGCTGGAAGATGCT CTTAGGAGGTCTTATATGCTGGTGAATAGTTGTCAGGACCGGAGCTACCTTTATTTGATGGCTATGGGCTGGAACATTGT TTATCAGTTCAGGAAGGCGCAGAATGAAATTGACAGATACCTGCGTCTAGTTCCTCTCATTACTCTCGTCGACAATGCTC GAGTCAGGGTATATGTTCTTCTTCACTCTGCTCAATTATCTGCTATGTGCATTTTTTGGAATTCTACTATAATTGATTTT GAAGCTAAAATCAATTTGGATAGAAGCTTCTGAGTGCGAGAGTTGATTTTGAGAAAAAAGTAGCTTATGAAACATGCTAA TATCTTTTTGTGAATGGTCTTTTCAGTGTTGACCAACAGGAAAAAAAAATAGAGTGAAAAGTTTGTGGTTTATGACTGAT TGAATTGTTCGTTCGACGTTTTGGATACTACTGATCAACCAATTGGCATTTTACTCCAATTCTAACCTTGATTGTTTACA TAGCCTTCTTTGTATAGAATATTCTGATTTTCTATATGCCCACTTTTGGTAGAAGATTTGGGCTACAGGAACTAAATTGT CCTGAACATGTTATCCAGCACATTTCACTTATTTGCTAGATAGAACAGAGTTTTTTCACTGAGTGGTTGGTTACTTGATT CTGCTACCGCGTTGAGATGTTAGTGCGGTGCATTGGAAGTTTGAAATCCTGGTTTGTCAAATTTAGTGCTCTATGCTGGT GAGGTGCATGTGCTGAATATTTGCAGTCAGCTAACCACATTAAGTGGTTTAGTTTGATACTAGATACAATTCAGAAAAAA AAAAGCTCGTATGCTTAAATGAGTGAAAAATTAGTTTCAAACATCTCTTTATAAGGATCCATTTATCTTAGGAACTTGTT CAAATTGCACTTAGCTGAATACTCTTTTTTGAAACTCGAAGTATTAAGATTCATATTCAAGTCACTCACCTAAGGAAATG GATCCTGTCTCTTCATTTTTTGCACAATTAACAAGTAAGCATTTAATATAAAATAGGATTCTACTTATAGTCCGGATTCA CACAATTGATACGGTTTAGCTGCATCATTGCGATCCTTTAGATAGGGCTGTGTTCTGGTTTTACTTTTACATCAGTTTTT TTATCAGCAGCACTTCACAAACAGGAAGTAGCCCAAATTGTCTGCCACAGAGCAATAAATCACATCCTTGTTCCTTTTCA TCATGTTTGTGAGTACGTGTCCGCGCGCGCAGGCATGTGAGAATGTTATAGAAATAGAAGTTGCGGCATTTTGTTTCTGA ATTTTGCATATTTCCCAATATATTTGAGGACTTCAAACTGTGTTGCATTGTCACTTTAGTTGCAACATCTACATCTCTAA ATTTGTCTAAATATGGTTGACAACTGGATTACTTTGGAATATACAGGAGAGACTTGAAGTTATTGAAATGGATCAACGTG AATACACATTGGATGATGATGACCAACAGGCACAGACAGTTATTTTAAAACCTGAACCTGACAAAGATGACACTGCAATG CTGAAGAAAACTCTTTCCTGTTCTTACCCCAATTGTTCTTTCACTGAAGCGCTCAAAAAAGAAAATGAAAAGCTTAAACT AGAACTACAACGGTCACAAGCAAATTTGGATATGAATCAGTGTGAAGTCATTCAACGTTTATTAGAAGTCACCGAAGTTG CATCTTATTCTGTTCCAGAGAAATGTTCATCTGAAAAAAGTCATAAGAAAGAGGAGTACAATTACTCTGACGCTAATGGT GAAAAGGTTCATTCATCTGATGAAAAATACCATGCAAAAGTTGACACTGTTTCACCATCGAGGTAGTATATTTCCCTCTT CCTCAATTTCAATGTGTTCTAGGTTCACTCGGGGGGATAACTAGTTGAGAAAAAATCAGAATATTTATGTGAATAATGAG CCATACAATTCTGACATCTAGGAAGATCCAAAGTTTACCCTTAGTTTTAACTATGATATTCCTGTTTCTTCCATCGGTTG GTAACATCAGCATGCAGTCCATACTTCATAATTGTTCTATTTTATAAATTTATCTGTTCTGCCATTTTGGTTACTAACTA AATTTGAACGAGTCTGATGCTTATATGCCTGACCTCAAACAGATTTTCTGTTTCACGAAAGGATCTGCAATCAAATGGAG GTTCATATCACCAGGAAGATTGGCACACTGATTTACTTGCTTGTTGTTCTGAACCTTCTCTTTGTATGTTCTCTCCTTTA GCTTTGTTTGGCTGTAATAGAATAGTATATTCACCTACGATGTTTATTACCTGTACTACATCTATAGCCTTACTAAAGGG AATGCCTTTCCTTGTGCATTTCCATTGTGTTAGTGGGACTAGCTTGTAACCCTTAATTACTTTACTAGGCATGATGCTCA GAACACAAGTCACATATCAGTATTACATGGTGCCATTATCTTGAGGTTTATTCTGCATCTTTTTATAAAGCTATCATATA GGTGCCATGGCTGTGTTGAGGTGGGAACCTTTCCTGTACAGGCATCAGGGATCTATTCAATTTAAAGATTAGTATAATGT AGCTATTGTTAGAAGTCCCACATTGGCTAGAGATAGAGCATAGATAGCCTTTATAAGGGTAGTGCAAACCTCAACTCTTG AGCTAGCTTTTGTGGTTGAGTATAGGCCTCCCAATTTCTAATATGGTATCAGAGCCTATCCTAGATCCATTTGTTGTTTG TTGTGGAGACTTCCCATATTCGGGGCACCCGTTGTTGTTGATCCCACGTTCCAGGTTGTTCAGTCCTGGACGTGAGGGGG TGTGTTAGAAGTCCCACATTGGCTAGAGATAGAGCATAGATAGCCTTTATAAGGGTAGTGCAAACCTCAACTCTTGAGCT AGCTTTTGTGGTTGAGTATAGGCCTCCCGATTTCTAATAGCTATGATTTTCTATCTTTTTGACCAAATTTCAATTGCCTC AAGTTGCCCACATTACATGTGTTTGTGGTCTGTAGATAAGTTAGATATTCTGTTCGACACTTGGTGGGATGAAAAAGACG CTACATGAGAATTAGGAAGAAAATTAGTAGATAGGATAGATGTGGCTTGCGTGATTTCATGGAATAAAATGAATGCATGT TGAATCAGGAAGTAGGATGAATTTATTTTTCTGTGAATCTTGAATGAGACTGGACGCTGGTACCTATTAGTGGTAATGGT GGAAGCTGTTTTTCTATTTGCTCTTACCTGACATGCTAAGTCATGCATGAATAGTTGTGAAGGGATAATCCCATTGAGCA TAAAAATCCTTAAAAGAATTTTTTTAGTGAGGACAAGATGATCAGGAGTTCAGGACTTCAGAAGCTAAATATTACATTCT CATTTAATGGCAGAAAACCCAGAGAATATTACAAATAAAAATTAAATCAGCTAAGTAGAGCTTCCAGTTCCTCCATACTT CTCATTCCAAATATATATTTGACCTGCAGGTATGAAGACATTCTTCTATCCTTGTGGAACATTTTCAAAGATTGCTAGTG TTGCAAAAAACAGACCCATATGTAAGTTAGTTATAATGAATTGTGTTAGCATTAAAGTGATGAGTCTATATCTGAGTAGT GTTTCTTGCAAACAAAGGCAGAATTTATGTAAATCAAGTTGATATTGATATTAACATTATACTATCCCTTAGATTTGGTA CCTTAGTAAATATCTTTAATATCTTGAGATTAACTTTTCTCTTTTTTATGTTCGGGAGACCAAGTGGAGTGATATGTCTT GAACTTACCAATAATGAAGATGTGATTTTCTGTGATTCAGACCCTTTCTATAACTTATGAGTTATTGTCAAGGGTTCTTT AAATTGCAAATACTTTTTGCTGCTTATAATGCTTACCTTCAATCTGATTATTTGAAACACTAAAAACATTATCAAGGTCC TGCTATTATGATTTCAGTTGTGTTTTTTCAGCCTCTGGCGAAGCATGTAATGAATTGATGGCATATTCATTAATTTTGTC TTGCTGTTGCTATACTTGCTGCGTAAGGAGAAAGCTTCGGAAGATGCTGAACATCACAGTAATGCTTCTTTCCTTCTCTA CATAAATATGACTTCTCATCATCCTCTCTTTTTGTGCTTTGTATTTGTGGATTTTTAGATATTGTTAGGTTCAATTGAGG GTGCAGATCACATATAGAGCTTTCTCTGGTAGCATTCTTAATTGTGATATGTCTCAAGTATTCCTTTTTTTTCTGAGGGA TGTATTCCTTCATCCAAACTTTTTTTGTAAGCATGTGATAGCAGTTGGCTGCCAGCTCATCAGTTTTATTAATCCTTTTT TAAGCAACTAATACCAACTCTTATTATTTCAAAGTAGATTCTATTTGTCCAATTTTCAAGGCAAGTTGAAAAAATATAGA TAATGTATTTGCTGGTCTCACCAAATGTTTTACTACTATCAATTACTTCTATGCTAGGGCGGCTTTGTTGATGATTTTCT CTCTCATTTGATGTGTTGCTGCTGTGCCCTTGTGCAAGAATGGAGAGAAGTGGAGATCCGTGGGGCTAATGGTATGTTTT CCTATTGGGAATTTCCTCTTATTCAAATTACCATTTCGCCTTTCACGTGTCTCAATCTTGTCTTTCCTTTTCCCTGCAAA ACCTGTTGAGTAGGATCTAGCCTGTTGTTCTTGTTGCAAATTTCTATTTTACTATGGCACTTGACTGAATGTGAATTAAC TAGCGAGTTCCATTTGCTGAATGTGCTTTGGGGTGCCTTGAAAACTGGGAAAGTGGCATTGCAACACAAAAACAAACCCA TACTAAATCATTCTTATCTTGTGA
CDS sequence (LotjaGi2g1v0379100.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCATGGGATCATATGGGGGATTTTGCAAATATAGCCCAGTTGACTGGGGTGGATGCTGTGAAGTTGATTGGGAT GATTGTGAAAGCTGCAAGCACTGCAAGGATGCACAAGAAAAACTGCAGGCAATTTGCACAGCATTTGAAGTTGATTGGGA ACTTGCTTGAGCAGCTCAAGATCTCTGAGCTCAAGAGGTACCCGGAGACCAGGGAACCGCTGGAGCAGCTGGAAGATGCT CTTAGGAGGTCTTATATGCTGGTGAATAGTTGTCAGGACCGGAGCTACCTTTATTTGATGGCTATGGGCTGGAACATTGT TTATCAGTTCAGGAAGGCGCAGAATGAAATTGACAGATACCTGCGTCTAGTTCCTCTCATTACTCTCGTCGACAATGCTC GAGTCAGGGAGAGACTTGAAGTTATTGAAATGGATCAACGTGAATACACATTGGATGATGATGACCAACAGGCACAGACA GTTATTTTAAAACCTGAACCTGACAAAGATGACACTGCAATGCTGAAGAAAACTCTTTCCTGTTCTTACCCCAATTGTTC TTTCACTGAAGCGCTCAAAAAAGAAAATGAAAAGCTTAAACTAGAACTACAACGGTCACAAGCAAATTTGGATATGAATC AGTGTGAAGTCATTCAACGTTTATTAGAAGTCACCGAAGTTGCATCTTATTCTGTTCCAGAGAAATGTTCATCTGAAAAA AGTCATAAGAAAGAGGAGTACAATTACTCTGACGCTAATGGTGAAAAGGTTCATTCATCTGATGAAAAATACCATGCAAA AGTTGACACTGTTTCACCATCGAGATTTTCTGTTTCACGAAAGGATCTGCAATCAAATGGAGGTTCATATCACCAGGAAG ATTGGCACACTGATTTACTTGCTTGTTGTTCTGAACCTTCTCTTTGTATGAAGACATTCTTCTATCCTTGTGGAACATTT TCAAAGATTGCTAGTGTTGCAAAAAACAGACCCATATCCTCTGGCGAAGCATGTAATGAATTGATGGCATATTCATTAAT TTTGTCTTGCTGTTGCTATACTTGCTGCGTAAGGAGAAAGCTTCGGAAGATGCTGAACATCACAGGCGGCTTTGTTGATG ATTTTCTCTCTCATTTGATGTGTTGCTGCTGTGCCCTTGTGCAAGAATGGAGAGAAGTGGAGATCCGTGGGGCTAATGGG CATTGCAACACAAAAACAAACCCATACTAA
Protein sequence (LotjaGi2g1v0379100.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASWDHMGDFANIAQLTGVDAVKLIGMIVKAASTARMHKKNCRQFAQHLKLIGNLLEQLKISELKRYPETREPLEQLEDA LRRSYMLVNSCQDRSYLYLMAMGWNIVYQFRKAQNEIDRYLRLVPLITLVDNARVRERLEVIEMDQREYTLDDDDQQAQT VILKPEPDKDDTAMLKKTLSCSYPNCSFTEALKKENEKLKLELQRSQANLDMNQCEVIQRLLEVTEVASYSVPEKCSSEK SHKKEEYNYSDANGEKVHSSDEKYHAKVDTVSPSRFSVSRKDLQSNGGSYHQEDWHTDLLACCSEPSLCMKTFFYPCGTF SKIASVAKNRPISSGEACNELMAYSLILSCCCYTCCVRRKLRKMLNITGGFVDDFLSHLMCCCCALVQEWREVEIRGANG HCNTKTNPY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 340 | 340 | - | – | |
| PANTHER | 1 | 408 | 408 | 2.1E-276 | – | |
| PANTHER | 1 | 408 | 408 | 2.1E-276 | – | |
| Gene3D | 15 | 128 | 114 | 4.7E-5 | ||
| Coils | 189 | 216 | 28 | - | – | |
| TIGRFAM | 294 | 394 | 101 | 2.4E-24 | ||
| Pfam | 295 | 392 | 98 | 8.8E-16 | ||
| Phobius | 341 | 357 | 17 | - | – | |
| Phobius | 358 | 409 | 52 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cell surface receptor signaling pathway | A series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription. |
Expression pattern of LotjaGi2g1v0379100.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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