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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0385200 |
| Transcript ID | LotjaGi2g1v0385200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | D-2-hydroxyglutarate dehydrogenase, mitochondrial; TAIR: AT4G36400.1 FAD-linked oxidases family protein; Swiss-Prot: sp|O23240|D2HDH_ARATH D-2-hydroxyglutarate dehydrogenase, mitochondrial; TrEMBL-Plants: tr|A0A0R0HMH0|A0A0R0HMH0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0385200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:88139959..88146031) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCTGGGTTGGTTCAGAGGAACCCCAGATTCTCAGAATTGAATGATGATGATGTTAGATACTTCCAGGAGATACTGGG TCAAAAAAATGTTGTGCAGGATGAGGAGAAGCTCAGCACTGTAAACACTGATTGGATGCATAAGTACAAAGGCTCTAGTA AGCTCCTGCTACAACCTTGGAACACTGATCAGGTTCTGTCTTTTATCTGTTTTATTTTTTCTTACCTTTCTTTTACTTCT ATTGCATGCATGTAATAAGCAATTATGCATTACCCCTTTAGAACATTGATTCTGTGTTTTCTTTGTTGATTTGTTTTCAA GAGTATTTCTGTTTGCAGGTTTCTCAGATTCTTAAATACTGTAACTCCAGAAGCCTGGCTGTTGTTCCTCAGGGTGGAAA CACTGGTCTTGTAGGTGGAAGTGTACCTGTCTTTGATGAAGTATGTCTCTTCTTCATTCACTCTCTGTCATGATAAGGGT TCAATCTTACAAAAAAGCCCAATTTTTACTGTGAGCTTAAATGCTGTTTTTGCATGTTGTATTTTGACTACTTTCTTACA ATCTGATGCTGCAGGTGATTGTTAGTCTTAGTTCTATGAATAAGATCATATCTTTCGACAAGGTAGGCTATCTACTTCTT GAAAGGCATATTTTTTATGAGCTCCCTCCTTCCTCTGTGTGTTTGTGTTGGATGGTTTTGGTAGGAACTTCTGTACTTTA TTGAGCACTGAGTAGCATTTTCTTTAAAAAAAAAGCTACTTTTATATCAATTTATCATCTGATCAATGTTTTTCTTTCCT ACAGTCTTTTATTTTTCTAAAAAGTAAATTAAATATTGCATTAGCTTATTTTGTGTTCACAATAGGTTTATAATCAACAT GCTTCAGATAGAGCTTATGGCTAGAAAGTTGTGTCTGTAAAATAAAGTAATACTATGCGGAGTGTGGACCACAATGCTCA AACATCCACAAGCAACTCACCTTAACACAGCTTTTTAATGTCATATAACCAAACAACATCTGATTCCACCAGTGACCTTA AAACACCAGATTGCATCAAATTTATTATAGGATTCGTTTCAATTGAATTAACTTCAGTGTCAGACATTGGAGTGACAGAT TTCAATACTTAGTGCTGAAGTTCCTGCCAATGTCTTTCGTAGGTTAGTGGAATATTGGTTTGTGAAGCTGGATGCATACT GGAAAATATAATATCATTCCTGGACAATGAAGGGTAATCTTTTTCACTTTATAAAGACGTTATAGTTTGTAATTCTTATA GATCAATTTCATAGAACCATAACTGGATGAATATTTTCTTTGGGCAATCTGATGCTAGCTACTTTTGAAAGAAGAATTTA CAATACTACCAAACTTGCTACTTCCATATTTTTAACTAATAATTCCAAAATGGGATTATGTTGGTCCTTTGCTTGATGAA ATTATGGCGGTAGTGGAAAAATGATTTTTCATTTGGTTTGTTCTTTTCTCAAAGTTCTATGTAGTGATAGTGCAGTGACA TAACTTAGGTCTTGAAATTTTTAGATGATCGGTTCCCCTTTCTTCAACCATTTGAGTTTTACTCATAGCCTTGAGGTGTA CTTTCTGTATTTTAATTGTCTACACTGTTCATACAGATTTATTATGCCACTAGACTTGGGTGCTAAGGGGAGTTGCCAGA TTGGTGGAAATGTTTCAACCAATGCTGGTGGTTTGCGTCTTGTTCGTTATGGATCTCTTCATGGAAGTGTGCTTGGTAAG AGAATACTTTAACCCATAAAACCTTAACTGTTTAAACAGGTTGAGTCTGATTGACTTTTACCTGTGTAGTTATATCATCT AAATTTAATACTTCCAAAGTCAATGCACCAATGCTAGATGATTTAGTGATTTCTATAATTGAGTCCAATTGTTAGGTAGA ATCATCTTCATATCAGAGTATAAACCACTGGGATTGTTTAAGACATTGCAAACTTAGTGGCATAATTGATCCACTTTCCT TTTGGCTCTGCTAAATTTATTCTGAAGCAAGATTCTGATTGTTTGGCAGGAGTTGAAGCTGTTTTAGCAGATGGTACTGT ACTTGACATGCTTAAGACGTTGCGCAAAGATAATACTGGCTATGACTTGAAACATCTATTTATAGGTTTGTAGTTAACAG TTGATAATAATGCAAAACTGGAAACTAATAGATAATGTGATTGTAACTTAACTTCCCAATGATGTAGGAAGTGAAGGTTC CTTGGGAATTGTTACTAAGGTTGCAATACTAACCCCACCAAAGTTATCTTCAGTAAACGTGGCTCTTCTTGCTTGCAAAG ATTATAACTGCTGCCAGGCATGATTAATGTTCTTACTTAGAATTTACTTTGCGAAGTCAATTTGTAAAACTAGTCATAGT TTATTCTGGTTGTTGCACTGGTCTCTTTTTTGTAATTTCTATGTGTGAGTTCAATTGATTGCCCTTTATGAATTTGGTAA TTTTATGCTGAGAGATTTGGAAGCAATGTACGTGTTCTTTTTTCTTTACCGTGTATGTTTTCATTTTTGTTTATGTGGAT CCTTGAGTTCTAATTTTATTTTAATTTTCTTATTATCATCTTATAAGGTGTAGACACATATAACATAGGTACAATGATGA AGAACTGTGAACCTGAATACAAAAGGACTCTCACACAAACCTCTCTGTATTTTATAGGGAACACATATAATAAATTTATG AAAACATAACTGGTCGCATTTCTGAAGAAAAGGAATACAATATATATAAGGATTTACTTAGATCATCAATTATTTTGTTT TAAAGAAAAACATATCCACCACCTTTGAATAAGGAAAATGAAAATGGATCTCTAATGACAAGATAATAGGAGCTAATGAG AACATATTAACTTCAAGTTACAAAGTAGGGGAAATTCTTGTATATAAGTTGACCTATTGTATTCATTTTTGTTTGTCAAA CTTTGACAATTTATACTGCTAACTGAAAATGTAAAAGTTTATGAAATTTTGTATGTTCATGTTTTGTTGTGCTGTGTGGT CTTATGGTTTATGTTTACCTTTTACTAGAAAAAGTTTATTCCAATAAGCTTTGCCCCTTTTGTTTGTGAGAATAAAACAG GCATAAATCTTATTAGATTTCTTGTGTTTCTATACTGCTTAACAGAAGCTACTACAGGAAGCAAAAAGGAAACTTGGGGA GATTTTATCTGCATTTGAATTTTTAGACAGCCAGTCAATGAATTTGGTAATCTCTAGTGATACTTTGTGATGTAATTAAT TTTTTAATTGTTACTTACATGCATTGAAGTTATCTTGGCTCATAAGCATCTGTTAAAACTTGATCTAAATGCTGCCATTG CCTCCAGTCTAGGACTATGGAGCTCTGGACTTTGATCTCTGATTTTGAAAGGACCTACATAATGTTCTCTTCCTTGTCAT AAAATTTGTGAGAATCATACTGGTCTGATTGGTTTCTGAGCAGGTTATAAATCACCTTGAAGGTGCTCGGAATCCATTAC CTACACTGCATGACTTTTATGTTTTGATTGAGACAACTGGAAGTGATGAATCTTCTGACAAGTAAATTTCTTGCCATTTT ATCTTGATTTACGTTGTTCATTTTTGTACAGTAAATTACATTGGCCTCACCTGCTATGGATTTTAATCAATCAAATACCC CCTATTTAAATCGTATGTTAGACAATTCTCAACAGATATTAGTGTAAACTTCCATGTTAATGGACTTATTCAGTGCTGAA TTTTGTCACTACTAATCTCAGGCCTCTACTGGCCTTAATGAACTGGCACCTGCTACTTGCAGGGTCTGGCCACTTATAGA TAACAGGTATAGGAGAGTTTCTTTATATATCTTGTCCTCCACAATTTCATCTTAAAATATCCTATGTTTATCGAAATGAA AATTTTATGCCATGAACCTAAATATATGCCTGAACACATTTGTTTATCCTTAATATGTGTAATTTTGTTTTAGTTGTCAA CATTGATCATGTAATTAAGGTCCTTCATATTTGATATCTCATTTGATTTTCATATCACCAGACAAAAGCTTGAAGCATTT CTACTTCACTCAATGGAAAATGAATTGATATCTGATGGTGTTCTTGCCCAAGACATAAACCAAGCATCATCCTTTTGGCG TCTACGTGAGGTTGACATATTCTGTTCCATGACTCTCCTTTTTGGAGGAATACTCTATGCTTTTCAACATTAAGGATATA TCTCTGTTGTGCTTAAGCTTTTAATATTTTAGTGGTTTCGCTTCTCTGAGCTGGTTTTCTGATTTTTTTTAGTCAGTATT TGACTATTTTCTCCTCTTCTGAATTCATGCTTCATTTCCTAAATCAACTAGCTTCACCAAGTTAGATCATCTGTACACTT TGGATTTGGAAATTGCATACCGGTGTCATGTAGAAGTTATTGTTACCAGTGTGCATGACTCCATATCCGCTTGCAATCTT GCATGCCAAATAAGGCTCTTTACCAGCTATATCATCCTTAGAGCAGATTTCAATTTAAACTTTACATATGGTTTTATACT TTTACAGTTTTACTCTTCAACTAATATGAACTTCCTGCTAAATTAGACATTCTTTTTCTTCATTTTTTCTGGGCTACGTT GCTCATAATTATTTTGATATCAGTAAGCACTTGTGGATGCTTTTCAGTATAGACCCTTCTTTGCTTGTTTGACATATATT TATTCTCAGTTTATTGAAATGGACAAAATTAACTAGATTTGTGAACGTATTGAGTGGCTGAAATTCATAAGGATCTAAAC GGAACTTTTTTTCCTCAAAAGTTTTATTTCTTCTGTTTGCTTTACAGCAACGGTTTGTCATTGGTGACTAGAATTTCAAT TTATAATGAAATCCTTAATTGTTCTTCAATGAAAATATTTTTGTAGAATTCAGTTATATTAAATGTTATTTACTGGTTTC AGGGTATAACCGAGGCATTGATGAGAGTAGGAGCAGTTTACAAATATGATTTATCAATACCTCTTGAAAATCTGTACAAT CTTGTCGAAGAAATGCGCTCTAGACTAGGTAAGAAACAGAATACTGTTACCATTTGTTGTCATATTTTCAGTTCCCTCTG TTGGTGTATTGTTCAGATACAATCTGATAGGATGAACAGTGCGCATGAACAGTAGCAGTTAGAAAGTTATTATTTAATTA TTTGTTGGGGTAGTTATTGGGTTAGTTATTTACATAAGTTTATGTTAGTTATGTTCTATCAAAACTGCCTAGGGGTGGTT ATTAAATTTCTAGTTATAAATAGAAGTTGTGGCTGTTATTTTAGACATTCAGAAATTGGGTGGTTGTCTTAGGGAGAGAC TGGACTCTCAAAATTCTAGAATTTGTAGGAGAAAACTGGCTCTCGAACACCAGTACTTCCATAAATATTCTGTAATAAAT TCGGTTCCTATCACAATCATAATGGATGAGATTTAATTGTGTCCTAGAATCCTGTGTATACTCTCTTAGCCTTTTATTAT GTAAAATATGTTATCAGTTGTATTGTATCACAATGGTGCATACTAGACCATGATTATTAATTTTTTTTAATTACAGGTAA TGCTGCTAATGTAGTTGGATATGGTCACCTTGGAGATGGTAATTTGCATTTAAATATTTCTGTGCCTCAGTATGATGACA AGGTAGCTCAAGCAAACTCAAAAGAACTACTTGGTTATGAAATTACTCTTTGCATTTTATAAGTCTATAGCTGTTAAATT TTGCAGATTTTATCGCAAATTGAGCCTTTCGTGTACGAATGGACATCTAAACACAATGGCAGTATTAGCGCAGAGCATGG CCTGGGATTAATGAAAGCTAACGAGATTTTGTATAGCAAGTCACTGGAAACGGTAAGTATATTGTGGACTCAAGCTGCAG TTCCTTCTATTTGAAAATGTGAACTTGTGAATTGAATGTCTAAACCATTTTGGAATTGTGCAGGTGCAACTAATGGCTTC CATCAAGAGTTTGCTGGATCCCAATCACATACTCAACCCATATAAAGTTCTTCCTCACTCTCTCAATGCATAA
CDS sequence (LotjaGi2g1v0385200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTGGGTTGGTTCAGAGGAACCCCAGATTCTCAGAATTGAATGATGATGATGTTAGATACTTCCAGGAGATACTGGG TCAAAAAAATGTTGTGCAGGATGAGGAGAAGCTCAGCACTGTAAACACTGATTGGATGCATAAGTACAAAGGCTCTAGTA AGCTCCTGCTACAACCTTGGAACACTGATCAGGTTTCTCAGATTCTTAAATACTGTAACTCCAGAAGCCTGGCTGTTGTT CCTCAGGGTGGAAACACTGGTCTTGTAGGTGTGATTGTTAGTCTTAGTTCTATGAATAAGATCATATCTTTCGACAAGAT TTTATCGCAAATTGAGCCTTTCGTGTACGAATGGACATCTAAACACAATGGCAGTATTAGCGCAGAGCATGGCCTGGGAT TAATGAAAGCTAACGAGATTTTGTATAGCAAGTCACTGGAAACGGTGCAACTAATGGCTTCCATCAAGAGTTTGCTGGAT CCCAATCACATACTCAACCCATATAAAGTTCTTCCTCACTCTCTCAATGCATAA
Protein sequence (LotjaGi2g1v0385200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPGLVQRNPRFSELNDDDVRYFQEILGQKNVVQDEEKLSTVNTDWMHKYKGSSKLLLQPWNTDQVSQILKYCNSRSLAVV PQGGNTGLVGVIVSLSSMNKIISFDKILSQIEPFVYEWTSKHNGSISAEHGLGLMKANEILYSKSLETVQLMASIKSLLD PNHILNPYKVLPHSLNA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 4 | 105 | 102 | 4.7E-26 | ||
| PANTHER | 5 | 106 | 102 | 1.0E-71 | – | |
| SUPERFAMILY | 10 | 106 | 97 | 6.07E-18 | ||
| Pfam | 55 | 106 | 52 | 1.8E-6 | ||
| PANTHER | 105 | 174 | 70 | 1.0E-71 | – | |
| SUPERFAMILY | 107 | 173 | 67 | 5.23E-18 | ||
| Pfam | 109 | 170 | 62 | 1.2E-18 | ||
| Gene3D | 131 | 171 | 41 | 4.6E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Flavin adenine dinucleotide binding | Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi2g1v0385200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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