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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR016164
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We have found 26 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.539s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v0809870.1
LjCkx8 PREDICTED: cytokinin dehydrogenase 6-like [Glycine max] gi|356539470|ref|XP_003538221.1| chr3 9845762 9848884 -
2 domain predictions
2 GO terms
Lj3g3v3650360.1
LjCkx6 PREDICTED: cytokinin dehydrogenase 6-like [Glycine max] gi|356542934|ref|XP_003539919.1| chr3 44514871 44518966 +
2 domain predictions
2 GO terms
Lj4g3v2171460.1
LjCkx2 PREDICTED: cytokinin dehydrogenase 3-like [Cicer arietinum] gi|502150402|ref|XP_004507936.1| chr4 29817085 29822610 +
2 domain predictions
2 GO terms
Lj4g3v2641050.1
LjCkx1 PREDICTED: cytokinin dehydrogenase 1-like [Cicer arietinum] gi|502108374|ref|XP_004493454.1| chr4 35942025 35944954 +
2 domain predictions
2 GO terms
Lj5g3v0434840.1
LjCkx7 PREDICTED: LOW QUALITY PROTEIN: cytokinin dehydrogenase 7-like [Glycine max] gi|356564029|ref|XP_003550259.1| chr5 4380475 4387632 -
2 domain predictions
2 GO terms
Lj5g3v0692300.1
LjCkx3 PREDICTED: cytokinin dehydrogenase 3-like [Glycine max] gi|356558359|ref|XP_003547474.1| chr5 10137598 10141548 +
2 domain predictions
2 GO terms
Lj5g3v2238680.1
LjCkx5 PREDICTED: LOW QUALITY PROTEIN: cytokinin dehydrogenase 5-like [Glycine max] gi|356509660|ref|XP_003523564.1| chr5 32118144 32122298 +
2 domain predictions
2 GO terms
Lj6g3v1249630.1
LjCkx4 FAD linked oxidase, N-terminal [Medicago truncatula] gi|124360772|gb|ABN08744.1| chr6 15350730 15354064 -
2 domain predictions
2 GO terms
Lj0g3v0360459.1
n.a. PREDICTED: cytokinin dehydrogenase 3-like [Glycine max] gi|356545727|ref|XP_003541287.1| chr0 189837718 189840862 +
2 domain predictions
2 GO terms
Lj1g3v4226830.1
n.a. PREDICTED: cytokinin dehydrogenase 1-like [Cicer arietinum] gi|502108374|ref|XP_004493454.1| chr1 49900784 49903713 +
2 domain predictions
2 GO terms
Lj1g3v4763480.1
n.a. PREDICTED: D-lactate dehydrogenase [cytochrome] gi|356505459|ref|XP_003521508.1| chr1 57083721 57094167 -
2 domain predictions
2 GO terms
Lj2g3v1728750.1
n.a. PREDICTED: d-2-hydroxyglutarate dehydrogenase, mitochondrial-like [Cicer arietinum] gi|502161240|ref|XP_004512090.1| chr2 26505075 26511668 -
2 domain predictions
2 GO terms
LotjaGi1g1v0423200.1
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT1G75450.1 cytokinin oxidase 5; Swiss-Prot: sp|Q67YU0|CKX5_ARATH Cytokinin dehydrogenase 5; TrEMBL-Plants: tr|A0A0U2UUJ0|A0A0U2UUJ0_LOTJA Cytokinin oxidase/dehydrogenase 5; Found in the gene: LotjaGi1g1v0423200 LjG1.1_chr1 91712580 91723816 -
2 domain predictions
2 GO terms
LotjaGi1g1v0669700.1
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT2G41510.1 cytokinin oxidase/dehydrogenase 1; Swiss-Prot: sp|O22213|CKX1_ARATH Cytokinin dehydrogenase 1; TrEMBL-Plants: tr|A0A0U2UHS9|A0A0U2UHS9_LOTJA Cytokinin oxidase/dehydrogenase 1; Found in the gene: LotjaGi1g1v0669700 LjG1.1_chr1 123336927 123340402 +
2 domain predictions
2 GO terms
LotjaGi1g1v0741700.1
n.a. D-lactate dehydrogenase, putative; TAIR: AT5G06580.1 FAD-linked oxidases family protein; Swiss-Prot: sp|Q94AX4|DLD_ARATH D-lactate dehydrogenase [cytochrome], mitochondrial; TrEMBL-Plants: tr|I1JQD0|I1JQD0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0741700 LjG1.1_chr1 131549106 131559739 -
2 domain predictions
2 GO terms
LotjaGi1g1v0741700.2
n.a. D-lactate dehydrogenase, putative; TAIR: AT5G06580.1 FAD-linked oxidases family protein; Swiss-Prot: sp|Q94AX4|DLD_ARATH D-lactate dehydrogenase [cytochrome], mitochondrial; TrEMBL-Plants: tr|A0A072U583|A0A072U583_MEDTR D-lactate dehydrogenase (Cytochrome); Found in the gene: LotjaGi1g1v0741700 LjG1.1_chr1 131549902 131553756 -
2 domain predictions
2 GO terms
LotjaGi2g1v0385200.1
n.a. D-2-hydroxyglutarate dehydrogenase, mitochondrial; TAIR: AT4G36400.1 FAD-linked oxidases family protein; Swiss-Prot: sp|O23240|D2HDH_ARATH D-2-hydroxyglutarate dehydrogenase, mitochondrial; TrEMBL-Plants: tr|G7KGB4|G7KGB4_MEDTR D-2-hydroxyglutarate dehydrogenase; Found in the gene: LotjaGi2g1v0385200 LjG1.1_chr2 88139507 88146463 -
2 domain predictions
2 GO terms
LotjaGi2g1v0385200.2
n.a. D-2-hydroxyglutarate dehydrogenase, mitochondrial; TAIR: AT4G36400.1 FAD-linked oxidases family protein; Swiss-Prot: sp|O23240|D2HDH_ARATH D-2-hydroxyglutarate dehydrogenase, mitochondrial; TrEMBL-Plants: tr|A0A0R0HMH0|A0A0R0HMH0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0385200 LjG1.1_chr2 88139959 88146031 -
2 domain predictions
2 GO terms
LotjaGi3g1v0117100.1
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT3G63440.1 cytokinin oxidase/dehydrogenase 6; Swiss-Prot: sp|Q9LY71|CKX6_ARATH Cytokinin dehydrogenase 6; TrEMBL-Plants: tr|A0A0U2VEG5|A0A0U2VEG5_LOTJA Cytokinin oxidase/dehydrogenase 8; Found in the gene: LotjaGi3g1v0117100 LjG1.1_chr3 14351358 14356165 +
2 domain predictions
2 GO terms
LotjaGi3g1v0546100.1
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT3G63440.1 cytokinin oxidase/dehydrogenase 6; Swiss-Prot: sp|Q9LY71|CKX6_ARATH Cytokinin dehydrogenase 6; TrEMBL-Plants: tr|A0A0U2T9H6|A0A0U2T9H6_LOTJA Cytokinin oxidase/dehydrogenase 6; Found in the gene: LotjaGi3g1v0546100 LjG1.1_chr3 96232473 96236973 +
2 domain predictions
2 GO terms
LotjaGi4g1v0309700.3
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT5G56970.1 cytokinin oxidase 3; Swiss-Prot: sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3; TrEMBL-Plants: tr|A0A0U2V489|A0A0U2V489_LOTJA Cytokinin oxidase/dehydrogenase 2; Found in the gene: LotjaGi4g1v0309700 LjG1.1_chr4 68577566 68583197 +
2 domain predictions
2 GO terms
LotjaGi4g1v0309900.1
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT5G56970.1 cytokinin oxidase 3; Swiss-Prot: sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3; TrEMBL-Plants: tr|I3T7E3|I3T7E3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0309900 LjG1.1_chr4 68607197 68610920 +
2 domain predictions
2 GO terms
LotjaGi4g1v0310100.1
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT5G56970.1 cytokinin oxidase 3; Swiss-Prot: sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3; TrEMBL-Plants: tr|H7BRI4|H7BRI4_SOYBN Cytokinin dehydrogenase 3; Found in the gene: LotjaGi4g1v0310100 LjG1.1_chr4 68634904 68641234 -
2 domain predictions
2 GO terms
LotjaGi5g1v0046100.1
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT5G21482.1 cytokinin oxidase 7; Swiss-Prot: sp|Q9FUJ1|CKX7_ARATH Cytokinin dehydrogenase 7; TrEMBL-Plants: tr|A0A0U2T7D7|A0A0U2T7D7_LOTJA Cytokinin oxidase/dehydrogenase 7; Found in the gene: LotjaGi5g1v0046100 LjG1.1_chr5 7770197 7777705 -
2 domain predictions
2 GO terms
LotjaGi6g1v0231200.1
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT5G56970.1 cytokinin oxidase 3; Swiss-Prot: sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3; TrEMBL-Plants: tr|A0A0U2V8L5|A0A0U2V8L5_LOTJA Cytokinin oxidase/dehydrogenase 3; Found in the gene: LotjaGi6g1v0231200 LjG1.1_chr6 53987588 53992563 -
2 domain predictions
2 GO terms
LotjaGi6g1v0231300.2
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT5G56970.1 cytokinin oxidase 3; Swiss-Prot: sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3; TrEMBL-Plants: tr|A0A0U2UQP8|A0A0U2UQP8_LOTJA Cytokinin oxidase/dehydrogenase 4; Found in the gene: LotjaGi6g1v0231300 LjG1.1_chr6 54003397 54007681 -
2 domain predictions
2 GO terms