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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0427100 |
| Transcript ID | LotjaGi2g1v0427100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SNARE-interacting protein KEULE; TAIR: AT1G12360.1 Sec1/munc18-like (SM) proteins superfamily; Swiss-Prot: sp|Q9C5X3|KEULE_ARATH SNARE-interacting protein KEULE; TrEMBL-Plants: tr|K7K529|K7K529_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0427100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:92459412..92463267) extracted from Lotus japonicus Gifu genome v1.2.
ATCTTTTACAATACCTTATTAGGCACCTGGTTATTGAGATCTTTCCTCAAGAAATATGTGTCAAATTTCAATTTCACTGG TTAGAGATTCTTTAATAGTTTCTAATCTCATCATCATCCTATTATTTGGTACCTTCATTTTTCAGGTTTGTTTTATTGTC ATATTAATGCAGGGTTTCATTACAAATAATGAAAGAGCTTTAGAAGAGCTATTTGGGGATGAAGAGAATAATTACAAAGG TGTTGCATGCTTGAATTTGATGGCAAGACGAATTGCTACAGTGTTTGCTTCATTAAGAGTATGTATATTACAAGATACAA AAAGTTGTAGTCAATGCTTTATAATTGTTAAAACACGTGATTGAGAAGTCTTTTGAAGCATGTAAATATCTTTTAGGAAT TTCCTTCTGTTCGCTTTCGTGCTGCCAAGTCCCTAGATGCAACCACAATGACTACTTTCCGCGATCTTATTCCTACGAAG CTTGCTGCTGGAGTCTGGGACTGTCTTATGAAATATAAGAAAACTATACCAAATTTTCCTCAGACAGAGACTTGCGAGTT GCTGATTCTTGACAGATCTATTGATCAGGTTTCATAGCTCATTTTGTTGGCCATTGACTTATATTCTTATGGCAGAGTGT CATGTTGTTTGCAATGAGGATCTTATTCTGATTTTGCAGATTGCCCCTGTAATACATGAATGGACTTATGATGCCATGTG TCACGATTTGCTGAATTTGGAAGGGAATAAATACGTTCATGAAGTAACTTCTACATTTTCCCTTTCTCTGTGAATTTTGT GTCTGCTTTCTTCTATATAAAGTATAAACATGAATATACTATATTTTTAAGGTTCCTGGCAAGGACGGCGGTCCACCTGA GAGAAAAGAGGTTCTTTTGGAGGATCATGATCCTGTATGGCTTGAGCTTCGCCATGCACATATTGCAGATGTATGTGCTT CTTTTACTATCCTAGGCTTTAGCAACATGAATACCTTTTGATATTGATGACCATGATGCCAGGCTAGTGAACGGCTGCAT GAGAAGATGACCAACTTTGTTTCAAAGAACAAAGCTGCACAAATCCAACACGGTTCAAGGTGAGTGCTAATTTTCTCGAG ATTTCTAAGCAATGAAATTGTTACATAAGAGGACATTGATGGTGATAGTCTTTATTTGGAATTAAATATTTGGCTATTTT TATAAATATCTTATGTTCTATAAAACTGCATGATTTATTTGACTCACCCCATAGTCCGACTAGCATTCATACCCAGTGTG ACATAAAAATTGATACTTCGCCACCTTTGCAAGAGCTAGTTGTCTTGTCTGAGAGAAGACTTCGAATACATTCCCTTCTA GTTTGTACTGAGGGACAAAGAAGTAGATAAAAAAAAAGCAAAGTATAAATTTTTCTTCCATGTGACAAAATGAATTTGGG TCAAACAATGCAAGTTGTAGAAGTTTGTGTTTTTTCTTAAATTAAGCCTAGTTTTGTGGTTTGATGGAAATGTTTATTTA TTCATCTGGTTCCTGCCGTAATAAACATCACTTAAATTATCAAATTGTATTGTATTTATAGAAATAGTGGTGAAATGTCA ACAAGGGACTTACAAAAGATGGTTCAAGCACTTCCACAATACAGTGAACAAATTGGCAAGCTCTCCCTCCATGTAGAGGT TAGTTCTTTTGTCATAAAATCATTATACAACTTCTTTCCCCTAATATTCATTATATGGTGTGATTTGCACAAATACATTT TCTATCTAATCTTTCGAGGCTATGTTTTTTTTTGCAACTACGGGGAATCATTTATATTTTTAAACGAAGGGGGCCTATTT AAAAAAATCCTGTAAAATAAAGGGACTTGAAGATTAATTTAATCATTAATAATGATAGATGATGGGCTTCTTCATCCAGA TTGCAGGAAAAATCAACAGAATCATTAGGGAGTCAGGACTGCGGGAACTTGGCCAGCTGGAGCAAGATCTTGTTTTTGGA GATGCAACAATGAAAGATGTGATCAAATTTTTTACTACGAATGAAGTAAGGAATTATCCTAGATGAGGAATCAAAGGGTG TTTTTTTTAACTCCTAATCAATGTACATGTCAAAATTATATAGCTTTTAGTGCAAGATAGAGTTGTGAAATTAGACATGC AACTTTTACACTAACTTTCATATTTAAACTGCTTAATTCAGGACATATCCCGTGAAAATAAATTGCGCTTGTTAATGATT CTTGCTGCAATTTATCCTGAGAAATTTGAGGGAGAAAAGGGTATGAATTTAATGAAGGTATGGCTTCTTTCTTATTGGCT TGCCCATCATTTTATATTTTAAAGAATAAATATGCTGCTAATGATGTTATTCCTAACAGCTGTAATGGTGTTATCCAACT TTTATCTTTCAAATGAGTTTTTCAGGTAGCAAAATTGACAGATGAGGATATCTGTGCTGTGGAAAATTTGAGAATGCTTG GGGTACAACCAAATACCAAAAAAAGTTCGACTCGTACTTTTGGTCTGAAGTTTGATATGAATAAGGTAAAAGGTAATTTC TAGTTAAAAATTGTGAGTTTTCAAGGTTACATTATGCCTAAAATGTGTTCTTTTAAGTTGTCAGAAAACGCGTGCTGCAA GGAAAGAACGTCCTGGTGAAGAAGAGAAATGGCAGCTATCGCGCTTTTATCCCATAATAGAGGTGCAAATTATATCAATA TGATTTTCTCGCATAAAATATGCATTCGCTTTAAAATTTCAAGGATAGCAGCCATCAGCATAAAGGAAGAGTTTAACGAT GTAGTTTGGTTGTCTGAGGGTTCCAAATATTAGTCGCTGCAAAAATGTTGAATAAGCAAATAGTTTTTGCTACTCTATCG TATAATGTCTTTTCGATTATGTTATGGGTTGCATATTTATAGCCTCAATGCCTCGTGTGATGTGTTGATGATTACTCAGG AACTCATTGAAAAACTCACAAAAAATGAACTGTCAAAGGTAGACTATCCATGTTTGAATGATCCAAGTCCAAGTTTTCAC AGCTCCCCCCTTGCTGGGTCTTTAAATGAAAATCATCATTCGATGAGATCTAGACGCACGCCGACTTGGGCTCGACCACG AGGCTCTGATGATGGATATTCCAGGTTTTCTTGTCTTCATTCCTCAGTGCTAGTCAGTAATTTAATTATTGCTTTTGATC AGATCAGTATATTTCTCTTTCTTTGTCCATTAACTGTTCTTCCCTCTACTTGCTCGCTTATTATTCACCCTTCGCTTATG AGTTGTGTAGACTTGCATTAGCTTGTTATTATTATTATTATTATTAATATATTTTAGTTTGTAGTAAACCACCATGCGTA TGTTGAAATAGCTAATAAAGCCGCAACTTTCTCATGTGATTTTCATATGTTCCTGCTCTCATACAGCGATTCAGTGCTTA GACATGCATCAAGTGATTTCAAGAAGATGGGGCGACGAATTTTTGTATTTATCGTCGGTGGAGCAACCAGATCAGAGGTT TGAATCCTTTCTTTGATGAAATGAGATTATAATATTTAATCCTTGTGTTCTAATTTCTGAACTGAACGTTGTTTTAATCT TCAGCTGAGGGCTTGCCACAAGCTTAGTGGAAAGCTGAGGAGGGAAATTATTCTGGGTTCATCAAGTCTTGATGATCCTG CACAATTTATCACGGTATTGAAGTTTCTACCTTATTCCTTGCCAGATGTGTTCCTTAACTAGGAATTGCAAATATGTCAA ATGCAACAACGATCCTTGCTTGACATTTGTCTTCTTTTGCAGAAATTGAAGACGCTAACTACACATGAACTTTCATTAGA TGATCTCCAGATATGA
CDS sequence (LotjaGi2g1v0427100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGTCAAATTTCAATTTCACTGGTTAGAGATTCTTTAATAGTTTCTAATCTCATCATCATCCTATTATTTGGTACCTT CATTTTTCAGGTTTGTTTTATTGTCATATTAATGCAGGGTTTCATTACAAATAATGAAAGAGCTTTAGAAGAGCTATTTG GGGATGAAGAGAATAATTACAAAGGTGTTGCATGCTTGAATTTGATGGCAAGACGAATTGCTACAGTGTTTGCTTCATTA AGAGAATTTCCTTCTGTTCGCTTTCGTGCTGCCAAGTCCCTAGATGCAACCACAATGACTACTTTCCGCGATCTTATTCC TACGAAGCTTGCTGCTGGAGTCTGGGACTGTCTTATGAAATATAAGAAAACTATACCAAATTTTCCTCAGACAGAGACTT GCGAGTTGCTGATTCTTGACAGATCTATTGATCAGATTGCCCCTGTAATACATGAATGGACTTATGATGCCATGTGTCAC GATTTGCTGAATTTGGAAGGGAATAAATACGTTCATGAAGTTCCTGGCAAGGACGGCGGTCCACCTGAGAGAAAAGAGGT TCTTTTGGAGGATCATGATCCTGTATGGCTTGAGCTTCGCCATGCACATATTGCAGATGCTAGTGAACGGCTGCATGAGA AGATGACCAACTTTGTTTCAAAGAACAAAGCTGCACAAATCCAACACGGTTCAAGAAATAGTGGTGAAATGTCAACAAGG GACTTACAAAAGATGGTTCAAGCACTTCCACAATACAGTGAACAAATTGGCAAGCTCTCCCTCCATGTAGAGATTGCAGG AAAAATCAACAGAATCATTAGGGAGTCAGGACTGCGGGAACTTGGCCAGCTGGAGCAAGATCTTGTTTTTGGAGATGCAA CAATGAAAGATGTGATCAAATTTTTTACTACGAATGAAGACATATCCCGTGAAAATAAATTGCGCTTGTTAATGATTCTT GCTGCAATTTATCCTGAGAAATTTGAGGGAGAAAAGGGTATGAATTTAATGAAGGTAGCAAAATTGACAGATGAGGATAT CTGTGCTGTGGAAAATTTGAGAATGCTTGGGGTACAACCAAATACCAAAAAAAGTTCGACTCGTACTTTTGGTCTGAAGT TTGATATGAATAAGAAAACGCGTGCTGCAAGGAAAGAACGTCCTGGTGAAGAAGAGAAATGGCAGCTATCGCGCTTTTAT CCCATAATAGAGGATAGCAGCCATCACCTCAATGCCTCGTGTGATGTGTTGATGATTACTCAGGAACTCATTGAAAAACT CACAAAAAATGAACTGTCAAAGGTAGACTATCCATGTTTGAATGATCCAAGTCCAAGTTTTCACAGCTCCCCCCTTGCTG GGTCTTTAAATGAAAATCATCATTCGATGAGATCTAGACGCACGCCGACTTGGGCTCGACCACGAGGCTCTGATGATGGA TATTCCAGCGATTCAGTGCTTAGACATGCATCAAGTGATTTCAAGAAGATGGGGCGACGAATTTTTGTATTTATCGTCGG TGGAGCAACCAGATCAGAGCTGAGGGCTTGCCACAAGCTTAGTGGAAAGCTGAGGAGGGAAATTATTCTGGGTTCATCAA GTCTTGATGATCCTGCACAATTTATCACGAAATTGAAGACGCTAACTACACATGAACTTTCATTAGATGATCTCCAGATA TGA
Protein sequence (LotjaGi2g1v0427100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCQISISLVRDSLIVSNLIIILLFGTFIFQVCFIVILMQGFITNNERALEELFGDEENNYKGVACLNLMARRIATVFASL REFPSVRFRAAKSLDATTMTTFRDLIPTKLAAGVWDCLMKYKKTIPNFPQTETCELLILDRSIDQIAPVIHEWTYDAMCH DLLNLEGNKYVHEVPGKDGGPPERKEVLLEDHDPVWLELRHAHIADASERLHEKMTNFVSKNKAAQIQHGSRNSGEMSTR DLQKMVQALPQYSEQIGKLSLHVEIAGKINRIIRESGLRELGQLEQDLVFGDATMKDVIKFFTTNEDISRENKLRLLMIL AAIYPEKFEGEKGMNLMKVAKLTDEDICAVENLRMLGVQPNTKKSSTRTFGLKFDMNKKTRAARKERPGEEEKWQLSRFY PIIEDSSHHLNASCDVLMITQELIEKLTKNELSKVDYPCLNDPSPSFHSSPLAGSLNENHHSMRSRRTPTWARPRGSDDG YSSDSVLRHASSDFKKMGRRIFVFIVGGATRSELRACHKLSGKLRREIILGSSSLDDPAQFITKLKTLTTHELSLDDLQI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 38 | 27 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| PIRSF | 28 | 554 | 527 | 2.6E-118 | ||
| SUPERFAMILY | 28 | 549 | 522 | 4.05E-100 | ||
| Pfam | 29 | 543 | 515 | 3.1E-81 | ||
| Gene3D | 33 | 156 | 124 | 2.7E-6 | ||
| PANTHER | 33 | 558 | 526 | 3.6E-298 | – | |
| PANTHER | 33 | 558 | 526 | 3.6E-298 | ||
| Phobius | 39 | 560 | 522 | - | – | |
| Gene3D | 157 | 271 | 115 | 4.0E-37 | ||
| Gene3D | 277 | 400 | 124 | 3.3E-11 | – | |
| Gene3D | 412 | 557 | 146 | 5.1E-28 | ||
| MobiDBLite | 448 | 483 | 36 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Vesicle docking involved in exocytosis | The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, that contributes to exocytosis. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. |
Expression pattern of LotjaGi2g1v0427100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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