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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0015600 |
| Transcript ID | LotjaGi3g1v0015600.1 |
| Related isoforms 8 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Coatomer subunit beta-like protein; TAIR: AT1G52360.1 Coatomer, beta' subunit; Swiss-Prot: sp|Q9C827|COB22_ARATH Coatomer subunit beta'-2; TrEMBL-Plants: tr|A0A072VC11|A0A072VC11_MEDTR Coatomer subunit beta-like protein; Found in the gene: LotjaGi3g1v0015600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:1642641..1654061) extracted from Lotus japonicus Gifu genome v1.2.
GTGGCACTTTCGTAATCTGACGTTAACTGCAAACAAAGCACCGCTCTTCTTCTTTGATTCATCCCCATGGTACTATTTTA CACCGTGCTCTCATCATACAAAAGAAAAAACAACACACATTTCTCTCCCTCATCACTGAGTTCGATCTCTGATCTCTCTC TCTCTCTTTCTCTTGTTCATCGAATTCAGTTTCTGATCTCGATCAACAGAGGCTAAGTTCACTCTCCAATCCACAACAAT GGTAAGCTTCTCCTTCTTCGATCCGTTTCAATTGCTTCTGCATTCTCATCATCAACCTTAGATCTGGATCCAATTCCCTT CGATCCGTTCAATTCTGCGTCGCTCTCAATTTTCTTACGATTTCAATTTCAATGTGATCTACCGTGCACTCACTCAGTTT GTTTTGTTTCTTGCATTTGCAGCCTCTCAGACTCGAAATCAAGGTACTGTAGCTCTTCCGATTTCAATTTCAATGTTCAT TTGTGTTTCATAGTTTTGTAGTGTGGTTGTTTCATAGATTTCTCACGTTTTCTGGCTACTTAAGCTAACGTGTATTTTCC TAAATCCTGATATTTAATCAGCGAAAGCTTGCGCAAAGATCAGAGAGAGTCAAATGTGTGGATCTGCATCCAACAGAGCC ATGGTAATGCTTTGCTTCGTTACATTGTTTGTTTGAAATTCAATTGTGATATGAAACTAGTTTTATAAATGTGAATATCT GCAACTGTTTTAATCGCCGGTGCGATTTTCTTCGCGCGTGCCTGGATTTTAGTCACTGATAGCGGTGTTTGCAATACTTG ATGATAATGCAGGATTCTGGCGAGTTTATACTCTGGAACTGTGTGTATCTGGAATTACCAATCTCAGGTATGGAAATTCT CTTTAATCTTGAGATGTGTTGTGTACTGTTATAAATGAATTTCATCCAAATGAGAAATGCAATGGTTGATAGTTGATACC TATATGTTGGCATTTAAGTCAGACACGGGTGTTTGTTGATTGATCTTCAAACAAGCCACCTTTTGCATGGTGCCTATATA TTATGAGCTGCTGGTTCACAATGAAGAGACCTTTTACTCATGGTTTTCTTCAAATTTCGAGCAGCTATATGGTTGATTTA ACATATTGTTTGAATTAATGGCTGAATGCACGGAGCAAATATTGAAAAAGATTAACAAGACATTTGTAGTTGTTGTTTTA AATGGTTCATTTAGTAGTCTTCTGGAGATAGTTCATTAGTCCAAATATGTAGGGCTGCGAAATGTCCCGTCCCCCCTCAA ACTGTCCATAGAAAGGCTATTAAAATAGAATTTTACAGTTGCAGAGTCTGTGTATTGGGGTAGATTTCATATTCAATTAT GTTCTCGTGAATCTTTTAAATGTCTTTATACTTTTGTCAGTTGAGCTGTTTAGGCACATTGCATTGATAAAGTTTGAGCA ATTTTAGATAGTTCAATCACCATTTGGCGTAGATTTTTTTTTAACTTTTGTTGTTGACCTTGTACATTCTGCAAGCTGTA GTGTACTGGGTTAGGCTATATTATTCTTGTTTTCTCTATCACAAGCTTTCTGTTTTAACTGAGTCATTACTAGTTTCAAT GGAGATTTTGCTATTGTAATTAACTCTGATTTTGTTCATGCTGTTTCAGACCATGGCCAAATCTTTTGAGGTTACTGAGT TACCAGGTACATGAGATTTTTAAGTCCATTTCTTCCTCTTGATACATTTTGCTTGGAGGCTTTTGATGCATTTGATTGAA GGCATAGTTTTATTGCATATTTCTTACTCTGGAAATCATTTGGCTCTTGTGCAACATGATTTTACAGTTAGATCAGCCAA GTTTGTTGCACGCAAACAGTGGGTTGTTGCTGGAGCAGATGATATGTTCATCCGTGTCTATAATTACAACACAATGGATA AAGTCAAAGTATTTGAAGCACATACAGACTACATTAGGTGTGTGGCAGTTCATCCTACCCTTCCTTATGTGCTATCATCA TCTGATGATATGCTCATTAAGCTTTGGGATTGGGAAAAGGGCTGGATTTGTACCCAGATATTTGAAGGACATTCTCATTA TGTCATGCAAGTGACATTTAATCCTAAAGATACAAACACCTTTGCCAGTGCATCTCTTGATCGAACCATAAAGGTATATC TGTGTTCTTGTTGCCGGTTGTTTCCTTTTCTTTAATTATTTTTTCTATTCTTTTATGATATAATGCATTGATGCATCTGT TATCTTCTCTTTCCAGATCTGGAATCTTGGCTCTCCTGACCCTAATTTTACATTGGATGCCCATCAGAAAGGAGTGAATT GCGTTGATTACTTTACAGGTGGTGATAAGCCTTATCTAATCACTGGTTCTGATGATCACACTGCAAAGGTATTGTTTCAA TTTCAGTTTTCTTCTTCTTTTTTACTTGATTTATATGTTCGTGTGTGTGTGTGTATATATATATGTAGCAATAATGTTAA CAAAACCAATGAAACAGGTATGGGATTATCAGACCAAAAGTTGTGTCCAGACTCTAGATGGTCACACACACAATGTGTCT GCTGTATGCTTTCATCCTGAACTTCCTATAATCATTACTGGTTCTGAGGATGGTACAGTACGCATATGGCACTCGACAAC TTACAGGTAATTTGAGATGCACAGATAACTGAGTTATGAGCTTTATTTTTATGTTTTTTCTGTTTGGCATATTCTGATGG AGACCAAAAGGAAACAACAGGAAAATATTGTATTATCAGAGAATAGACACTGAAATGAAAAAGGGTCACAGTAGACGATA TCCTCCACCTTCCTAGAGCCTATGGCTCCACAGATTCAAAATTCTCTGCCCAAAAGTAACTAAAACCACCATGTTGGTGA GTACCCATTCCAGAAACTAACTTGCCGAGTCAGCAAATTATTTATGGTCTTCCCCATTCTGCCCTTATATTGGAATAAAC CGTACAGGTTTTGGGGTTTTTGTTTGGACCATTATCAAGCTGACCTTGACTTTTAACTTCAAATTCAAGCCTAACATTCT AACACTGCCCCTTTGTATAATACAGCCTTGTCCTCACGTTAAAAAAAAACCTTGTCCTCAAGGCTGAATATTGGAAATTG ACACCTGATAGTGAACTCATGCTTCCTGAAAGGTTCTTGCCTTCCATCATTGACCTCTATGTCCATTCCCTCAGGCAGAT GCTGCTTGACTTGATTTTATCCCACTTCCATTTATTCGAGGAGACTTGTGACACATGCAACACTAGGTGGATTTTGGAAG TTACTGGAGTTGTAATTTTTAAGCCACTTTACCAACCTGTTCCACAATCTGAAATGGACCATAATACCTCAAATCACAGG ATTGATTCTTCTGTCCACACAATTGTTGTTGATGTGTTCTGAGTTTCAAAAAGACCCATTCTCCAACTGTAAATGACTCC TCATGTCTGTGTTTGTCCCTCAATTTCTTCATCCTATTCCTTGCTCTCTCCAAATTATACTTTATTTTTTTTCCTTCTCC CTTTGTCATCCACCCTTTTATTGTAACTTGAACTATCTGGCTGTGGTTGACTTTTGACCTTAAAGAATGAGGCCTTTTAC TGACATGCCATTATGTTCTTTTGAATAATATTGTGGCTGATTTGTGACTTCTTCACTTTTTCTTTTCACAGTTTCATAAG TGCATCTATGATCAGGAAGATTTATTCTGATGACTAATCGCTAAATTTTATTTAAATTTGAGATAACACTAATATTAAGT TTGAATTGTACAGTGTTGTTTGTCTCTTTCTATTTTATTTAGGTTATACTATCTTGGCATTTCATTACTTATTGTTTTCT CAATCTACTTACAGGCTTGAGAACACATTGAACTACGGCCTTGAAAGAGTTTGGGCTATTGGATACTTGAAGAGTTCACG TCGGTGAGTTTTTTTTCAAATAAAACTTCTGCAATCAATTTCTTAGTCTTGTTATTTTGGGCCCTTGAATAACTGAGTAG AAACAGTGTCAAATTGTGCCTGAATAATGAAGTTTTCTTATCTTCACTCTTCTGTCATGACTTCAAAATAACCAATATAA CCATCTTACAGGGTTGTGATTGGCTATGACGAAGGAACAATTATGGTCAAACTTGGTCGAGAAGTACCTGTGGCTAGCAT GGACAACAGTGGGAAAATTATTTGGGCTAAACATAATGAAATTCAGACTGTCAATATAAAGAGCATAGGAGTAGATGCGG AGGTATGGACTCAATGTACCCTTTGCGGTATAATATGTGAGCAAGAAGTGTAAGGTTCTTTTTCTTTTAGTGACACATGC GAGTACTATGCTTCTTAGGTTGCTGATGGAGAAAGGTTGCCTTTGGCTGTTAAGGAGTTGGGCACCTGTGATCTCTACCC CCAAGTGAGTCCATGTCATTCTTCTTAATTATTTTGCATTCTTTTGCTCAGCTTCTCTAATTCTTATCATTTCTACTCTC ATTATGCAATCATTGACAGATTACAGAAAAGTGGTATATGTGCATTATCTAGCATATCATTATCAGACATTTTGGTATAT TCATGCTGACTTCATTATGCAGTATTTGTCACATTTTTCTTGAACCCTGTCCAAATTTTATTTTATTTGTATGCAAAAAA GCTTGTCATTGCATATAGGATTAAAGCGGCCAGCGAACCTTGACTTTTATGTTGAGTATATAATCGGGATATTGGTATAA TTTTGCAATGTTTGACGTTGAAATTCAAAATTAATTGCATGTACCTCTGTTTTCTTGTAGAACTTAGATATCTGAGGGAA TATGACTATTTAATGTTGCCAAATTACTGGGTAGTTCAGAACTATGTTTTGTAATCTCCAATCTATATCCAGAGAAGCAA GTTTTAAAATGTTAGTCCTTGTTGCTGGTTCAAGCAATATTTATTTGATTCGTGTGTAATGGCTTGATGTTTAATTATAT GCAGAATTTAAAGCACAATCCTAATGGGAGATTCGTTGTTGTATGTGGAGATGGTGAGTATATTATATACACCGCGTTGG CATGGAGAAATAGGTCATTTGGTTCAGCACTAGAATTTGTCTGGTCTACGGATGGAGAATATGCAGTCAGGGAAAGTACA TCCAAGATTAAAATTTTCAGCAAAAATTTCCAGGTTTGCACTTTTGTTAAACTTTATTTACTCGTTAATCTTGTATTTTG TCTGGTGAAAGTGGTGATGAGAACCAACAAATTGTAGCTTTTTCTCAAAAGGGTAAGCATAACTAGATCTTGCCATTCTT GTACTCTGTTATTGATAGCTCTCGGGGTAGACCTCCTATCACAAAGGTTTACCAGAGGAGCTGTAAAGAGAGTTGTTAGT CAGTTAGTGGTTAGAGTTGGTTAGTATAACTGACTATTAGTGGAGGGAAAGTTAGGATTCAAATGTATAAATAGGGGAAA TGTTATTCAGTTAGTTCATTTTCTGGTTGTTAGTTGTTTGGAAGAGAGTGAGTCTCTCCAAATACTTACCTGTATCTGTT ACACTCTGGTTCCTAAATTGGGAATTAGGGTTCCTTAACAATAATCTTTTCATTGTCACATCTGTCTTCTAAATGAAAAA ATTTGCTCGTTGTGGATGTTTCAGGAAAAGAGGAGTGTCCGACCAACATTTTCAGCTGAACGAATATTTGGTGGTACTTT ATTGGCAATGTGCTCAAATGATTTCATCTGCTTTTATGAATGGGCTGAATGCAGGTTGATCTATCGCATTGATGTCAATG TGAAAGTGAGTGCTAGATTAGGTGACATCTATTTTTCTCTGCTTTTCTTTCCTTATATTCAGTGTTTAATTTAATTTTGT TAATTTTCTTTTGTCAGAACCTCTATTGGGCTGATAGCGGTGATCTAGTTACAATTGCTAGTGATACATCATTCTACATC CTGAAGTACAACGTGAGGATTTTATGAACTTAATCATTTTCTTATAGTTGCTGCCTTGCTTTAGCTGTATGATTCTTTTG TAGACCTTTTCTGTTGAAGCACTGTAAATATTTTGACTTCCATTGTTGCAGCGTGATGTTGTTTCATCGCATTTAGATAG TGGAAGACCCGTAGATGAGGAAGGTGTTGAAGATGCTTTTGAGCTCCTTCATGAAATGAATGAACGTGTCAGGACTGGCA TCTGGGTTGGGGATTGCTTTATCTACAACAATTCCTCTTGGAGACTTAATTACTGTGTTGGTGGTGAGGTATTAACTTTT ATCCCTTGTTTAAAATAAAAAGAACCGCATATTTTTTCTTGAAATACAAGGATCATATGAAACCTATTGATGCAACATTA TGAATTCAGGTAACTACAATGTTCCATTTGGACCGCCCTATGTACTTGTTGGGATACCTTGCAAACCAAAGTCGGGTTTA TTTGATTGACAAAGAGTTTAAGTAAGTGGACTATTTGTTTGGATTATTTAGAGTCTCAAATTGCAGTAATTTGAACTATT TTTCTTTCTATTTATTTTCTTCTCAGTGTTATGGGATACACACTGCTTTTAAGCTTGATTGAATACAAAACACTTGTGAT GCGTGGCGATTTAGAAAGGGCCAGTGAAGTTCTACCATCAATCCCTAAAGATCATCATAACAGGTAGGAGCTACCTTGTG TTATATAAGAGAATGATTAATTTATTTTCGTTATGCCTAAAAAGCTTGTAGGGACAGAATTATGGTTCATAAAATTATGT ACTGTGTATCTAGATAATTATCATGGATTAGTATTCCCTCTCTATTTTATTTTTCTGTTTTGTGCAAGAAAGTCTGGTTT TGATATTTGAACCTGCTGAAAATGGCAGGGCATCTTTAGTGGCTGATCAGAGAATCTTTTGATACTCATAATTTTGTATG AATAACTATTACATTTATTCTGGACTTTCCATTCTTCTTATTTGTCCATCAATGGTTTTCGATTGTCATGCTTTTATGAT AATCTTGTATGAATAAATATTGCACATTGATTTTCCTGTTACTTGTTTTAGATTTTACAATTTGTTCTATTGATCATATA GTGTTTATTCAAACTTCGGGCTTCAGATCTAATGTTTTTCCATATGTTTACCATTATCTAATTGAAATTTTGATTTCATG GTAGTGTGGCTCGTTTCCTGGAATCACGAGGGATGATAGAAGATGCTCTTGAAGTAGCTACTGACCCGGACTATAGATTT GATCTAGCAATACAACTTGGAAGATTAGAGGTTGCAAAGGTGCGTGTTATGTCTACAAGGAGATATTGCATGGCTTGTGA ATGTTAACTTTGGTATCTAAATTTTTCATCTTTCTTTATGAATTTGACATGTCATTTTAACTCAATAGTATTCATTCTCT TCTCTTGCAGAGCATTGCAATAGAAGTGCAGAGTGAGTCAAAATGGAAGCAGTTGGGAGAGCTAGCTATGTCTACTGGAA AGGTGTTTTTCTTTATGATTTAAATCTCCAACTTTAGTGATTCATTTGACACTTAAAAGCTCAATTCCGTTCCTGCATGT CCAAATGTATTAAAGTGAGTGCCTTGATGATGATATACTGCTGAATATCACCATGTGCACAGGATAGATATAGGCCTTAT TGAAGCTTTTGAGATGCAAGACAGCAAGAGGCTACAGTTTAGTTATGGACAAATTAAGATTTTCTTGGTTGCATGTTAGA AGTTGTCTCAGGTGCTTTGAGTTGTAGATGCTGATTCTAGTGTATAGTTAGGATGTTAAGGTTTTCTTCTTTTTCATCAT AATGAGTAATGATTATGTAATCTGGTAGACTCAATATAATGATGATTCTATTTGAATATTCTCTTGTTCAATTGTAGCTC ACTGTATTTTACATTCTTGCAGTTAGAAATGGCTGAGGAATGTTTAAAGCATGCAAAGGATTTGAGTGGATTATTACTGC TGTATTCTTCTTTAGGCGATGCTGAAGGAATATCAAATCTTGCAACCCTTGCTAAAGAGCAAGGGAAGAACAATGTCGCA TTCCTGTGCTTATTTATGTTGGGTAAACTTGAAGACTGTCTTCAACTATTGGTAGAAAGGTAGTCTTCTAAAGTTGTTCT ATTTTTCCATTCTGTATCTTTCTGACATTAGTAGGGAGGGGAATGGACTGATTAGACTTCAATTAGATATAGAACTGAGT TATGCGTTTTGCAGCAATCGGATTCCAGAGGCAGCTTTAATGGCTAGATCATATCTCCCAAGTAAGGTCTCTGAGATTGT GGCAATTTGGAGGAAAGATCTCAACAAGGTAATTTCTGATTCAGATATATGGTATTATGATGGAACTTCCTGATATTTAT TTTATGGGGCATGAGATCATGGAAATTCGGATCCTCTATTGCCCTAAAAAGAACTGTACTATTCTGCCGTTGAAAATCTA AGAGTAGGCACATTTTCAAGGTCTAAGATCCTTTTTTAGTTGAATTGAAAAAAAGATTCTCATTCCTGATCTGATATTGC GGTGATAGGAACTTCGATTCTGGTTCAGTTGCCTTCTTTTGGGCAGTGTTATATGTTGGTAAATGGGTTGTGGGTTATAG AGAGTCTATTTGAGTGCAGGTTAATCCTAAAGCTGCTGAATCTTTGGCTGATCCTGAGGAATATCCAAATTTGTTTGAAG ACTGGCAAGTCGCCCTTGCTGTTGAATCTAAAGCTATAGAAACAAGGTTAGTGTGGAAAATGCTTATTTTCTTGCACTTA TATTACTGTTTTGATGGGTTAGTGTTAGTGTTCAGTGTTCACATGTCCAATAAATACTTACTAACTATAAGATCCTTTTT TAGGAATGTTTACCCTCCTGCAGAGCAGTACATCAGCCATGCTGACAAATCACATGTAACCCTTGTTGAAGCTTTCAGAA ACATGCAGATTGAAGAAGAGGAGCCTCTTGAGAATGGTGACTCGAATTATGAGGTATAATAAATTTAGGGAAAACACCAC ATACTAAAGGTTGCAAGAAATTCTCTTAAATTGTTTGTTTTTCTGCAATATAATAAACAATAACCTTAGTAGATTGTTGG TTGAGGTGTTAAAGTGTTTGTTTATTGTATTGTCCTCATGTTGCAGCAAACTAAACAAGATGAAGAGGACTACACAGAGG AACAAGAGGAACAGAATGACTACAATGAGGAACAGGAGGAACAGAATGGAGAGGAAGGAAGCCAAGAGGAGGCCGTTGTA GTGGATGCGGAATCAACAGATGGTGCAGTACTCGTCAATGGTAACGAGGCTGACGAAGAGTGGGGTACGAATAATGAAGG AGCCCCGTCAGCCTAAAAGCAATTAGTTGGGGTGGTGTGAAAATCGAAATTTTGTCTCTGGTGATTAATTGTTTCTGACG TGCCATCTCTAACTCGCGTTTGACAACTACCTCTTTTTACTATAATCACTTATGCCCCCCTCTCAGTCCTACCTATTCTA TTTGCTTTCAATTTTTAGTATATCTGATACTTCACTGCAGTTAGGCTGTATATTTGGGAATCGGGGAGGAAATTTTCAAA TGATGTCCTTTGTCTATAGTGAATAATTGACTAAATCTTATAACTATGTTTCCCCATGATTTTGGAGACTACTGGGCTTG GTAGTTTATAATGTTTTGTTGCTCTTTGCACACTGGTCTCTAATTTGTTAACTTTAAATCTAGGAAATAACCAGCAAATG TTTCCTGCAAAATCTTGCTGTTGCATATCTTGATTTAAAATCACCTGTGAAATATGGTGTACATTATCTTCTTCTTAAAG TCGTGATGTACTGCCATTGATCTTCACTTTCTTGCTTCCTTTACTTTAAAATGTTGTTGATGCTTGGCTTTCTGTATTCT TTGAACATCTTTTTGTTTTAATAGAACTGCTTGGATGGTTTATTTATGATGAGCTTGTGTATTCACTGTATTATTGACCT CAATTGTGGATGTCACCTCAATTAAGCTGTTTCCTTACTTAAATACTCATCTTTTGTTGACAGTGCTTGCACCACGTCAC TAGGTCCCATCAAGACACCCGGTTCCAGCTTTTGGGATACTAATCTGAGGTTAGAAGAACACTTACATATTGGCTTCAAC ATACTGGCCTTGCATTGACAAGTCTCCTTCATTTTATTGGGATGCTTGCATAAATAGCGTTGTTAATAAAGGACTGGGTC CGTGTTCTGTCATCTGCAGATATCTGGCACTGCATGTTTCTGGATTGTTGGTATGCATTGCCTAAGCATGATAATTTTCT AGTGTTATCTGTTTCATTTTCCTTAAATTTGAAATGCAGGTCTCCTCCTGGGGGATATGAAGCGATTCTGCGGACTGGTT GACTGGTTGTTTCTGTTTCCTGGTGTTGTGGTTTTGTAGTGCCCTGAATTATCTAATTCTGCACGCCGTATAACAATATC CCTTAGGGTCAGTTACAATTTACTAGAATTTATATAGCACATTCTTTTGGGGCTTTACCCCAACATATTCGTACCATTGT GAATGTAGAAAAAACTGAACTAGAAATGGTTGCCTGCTTAAATTTTAGATAGTTTTTTTTTTTCTTGGCCATATTTTTGA ACATCTTTATGTTTTCGTGGATTGTAAACATGGATGGTTAATAGAGAAAATAATGATTTCTTCCCCCAATGTTGCTTCTC TAAACTGATTATTCCTCCTGTTGACCTAAAAAAACAGATTATTCCTCCAAATAAATCACAACAATTCTCATTTTAAGTTC ATGAGCTTTGTATGAGTCTTTCCCTTTCAGAGTAAGTTCGCCCTCCATCGATTAGCAGTCCTAACGAATGCTTCTTTTCC TTCGTTATTCAAAGTAAGGTGGATAGGATTACGGACATCTTGTAGAACATTCTTGAAACTGCAAGTATCATCTTCAATAA ACACCAAACTCGCAATTAGGTAATAGAACATGGATTTGAAAAATGTTATTACCTCCACTTGATTTTAGTACCAAATCATC ATTACATAATCTTATTATAATATTTGTATTTTATCATAATTTTAGTCCGTAATGGTTTACATTTTATTTTTGAAAATCCA ATCTTTCTCGTTTACTCACTTCTTATAATTGGGTAAATTTTGTGTAAGTTTTACAAAATAGAGAGCGCGCTTTGATGTAA GAGGGATGTACTCGGGATTGGTTTGGTCCCATAATATTCAAGAAGGACGAAAGCCTCTCTTTGGGGATTAGTGTCAAGGC CTTTCGGAGTCTTTTATTTCTCATTTTTCCTAAAGCTAGAGTTGGTTGGCTTGATCGGTTTCGCATGATCATTTTCATTT TTTTGGCGGTTGGATCGCTCAAGCGGGCTGCCCATTGAGTGATGACAGCTAACAAAGAAGAGTCTTAGGGCGACACTTGC ATTAGACTTCGATTAATACCTGATTGATTGCTCGCTCACGACTATTATTCAAAGCCTTTCA
CDS sequence (LotjaGi3g1v0015600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTCTCAGACTCGAAATCAAGCGAAAGCTTGCGCAAAGATCAGAGAGAGTCAAATGTGTGGATCTGCATCCAACAGA GCCATGGATTCTGGCGAGTTTATACTCTGGAACTGTGTGTATCTGGAATTACCAATCTCAGACCATGGCCAAATCTTTTG AGGTTACTGAGTTACCAGTTAGATCAGCCAAGTTTGTTGCACGCAAACAGTGGGTTGTTGCTGGAGCAGATGATATGTTC ATCCGTGTCTATAATTACAACACAATGGATAAAGTCAAAGTATTTGAAGCACATACAGACTACATTAGGTGTGTGGCAGT TCATCCTACCCTTCCTTATGTGCTATCATCATCTGATGATATGCTCATTAAGCTTTGGGATTGGGAAAAGGGCTGGATTT GTACCCAGATATTTGAAGGACATTCTCATTATGTCATGCAAGTGACATTTAATCCTAAAGATACAAACACCTTTGCCAGT GCATCTCTTGATCGAACCATAAAGATCTGGAATCTTGGCTCTCCTGACCCTAATTTTACATTGGATGCCCATCAGAAAGG AGTGAATTGCGTTGATTACTTTACAGGTGGTGATAAGCCTTATCTAATCACTGGTTCTGATGATCACACTGCAAAGGTAT GGGATTATCAGACCAAAAGTTGTGTCCAGACTCTAGATGGTCACACACACAATGTGTCTGCTGTATGCTTTCATCCTGAA CTTCCTATAATCATTACTGGTTCTGAGGATGGTACAGTACGCATATGGCACTCGACAACTTACAGGCTTGAGAACACATT GAACTACGGCCTTGAAAGAGTTTGGGCTATTGGATACTTGAAGAGTTCACGTCGGGTTGTGATTGGCTATGACGAAGGAA CAATTATGGTCAAACTTGGTCGAGAAGTACCTGTGGCTAGCATGGACAACAGTGGGAAAATTATTTGGGCTAAACATAAT GAAATTCAGACTGTCAATATAAAGAGCATAGGAGTAGATGCGGAGGTTGCTGATGGAGAAAGGTTGCCTTTGGCTGTTAA GGAGTTGGGCACCTGTGATCTCTACCCCCAAAATTTAAAGCACAATCCTAATGGGAGATTCGTTGTTGTATGTGGAGATG GTGAGTATATTATATACACCGCGTTGGCATGGAGAAATAGGTCATTTGGTTCAGCACTAGAATTTGTCTGGTCTACGGAT GGAGAATATGCAGTCAGGGAAAGTACATCCAAGATTAAAATTTTCAGCAAAAATTTCCAGGAAAAGAGGAGTGTCCGACC AACATTTTCAGCTGAACGAATATTTGGTGGTACTTTATTGGCAATGTGCTCAAATGATTTCATCTGCTTTTATGAATGGG CTGAATGCAGGTTGATCTATCGCATTGATGTCAATGTGAAAAACCTCTATTGGGCTGATAGCGGTGATCTAGTTACAATT GCTAGTGATACATCATTCTACATCCTGAAGTACAACCGTGATGTTGTTTCATCGCATTTAGATAGTGGAAGACCCGTAGA TGAGGAAGGTGTTGAAGATGCTTTTGAGCTCCTTCATGAAATGAATGAACGTGTCAGGACTGGCATCTGGGTTGGGGATT GCTTTATCTACAACAATTCCTCTTGGAGACTTAATTACTGTGTTGGTGGTGAGGTAACTACAATGTTCCATTTGGACCGC CCTATGTACTTGTTGGGATACCTTGCAAACCAAAGTCGGGTTTATTTGATTGACAAAGAGTTTAATGTTATGGGATACAC ACTGCTTTTAAGCTTGATTGAATACAAAACACTTGTGATGCGTGGCGATTTAGAAAGGGCCAGTGAAGTTCTACCATCAA TCCCTAAAGATCATCATAACAGTGTGGCTCGTTTCCTGGAATCACGAGGGATGATAGAAGATGCTCTTGAAGTAGCTACT GACCCGGACTATAGATTTGATCTAGCAATACAACTTGGAAGATTAGAGGTTGCAAAGAGCATTGCAATAGAAGTGCAGAG TGAGTCAAAATGGAAGCAGTTGGGAGAGCTAGCTATGTCTACTGGAAAGTTAGAAATGGCTGAGGAATGTTTAAAGCATG CAAAGGATTTGAGTGGATTATTACTGCTGTATTCTTCTTTAGGCGATGCTGAAGGAATATCAAATCTTGCAACCCTTGCT AAAGAGCAAGGGAAGAACAATGTCGCATTCCTGTGCTTATTTATGTTGGGTAAACTTGAAGACTGTCTTCAACTATTGGT AGAAAGCAATCGGATTCCAGAGGCAGCTTTAATGGCTAGATCATATCTCCCAAGTAAGGTCTCTGAGATTGTGGCAATTT GGAGGAAAGATCTCAACAAGGTTAATCCTAAAGCTGCTGAATCTTTGGCTGATCCTGAGGAATATCCAAATTTGTTTGAA GACTGGCAAGTCGCCCTTGCTGTTGAATCTAAAGCTATAGAAACAAGGAATGTTTACCCTCCTGCAGAGCAGTACATCAG CCATGCTGACAAATCACATGTAACCCTTGTTGAAGCTTTCAGAAACATGCAGATTGAAGAAGAGGAGCCTCTTGAGAATG GTGACTCGAATTATGAGCAAACTAAACAAGATGAAGAGGACTACACAGAGGAACAAGAGGAACAGAATGACTACAATGAG GAACAGGAGGAACAGAATGGAGAGGAAGGAAGCCAAGAGGAGGCCGTTGTAGTGGATGCGGAATCAACAGATGGTGCAGT ACTCGTCAATGGTAACGAGGCTGACGAAGAGTGGGGTACGAATAATGAAGGAGCCCCGTCAGCCTAA
Protein sequence (LotjaGi3g1v0015600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPLRLEIKRKLAQRSERVKCVDLHPTEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMF IRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWICTQIFEGHSHYVMQVTFNPKDTNTFAS ASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYLKSSRRVVIGYDEGTIMVKLGREVPVASMDNSGKIIWAKHN EIQTVNIKSIGVDAEVADGERLPLAVKELGTCDLYPQNLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSTD GEYAVRESTSKIKIFSKNFQEKRSVRPTFSAERIFGGTLLAMCSNDFICFYEWAECRLIYRIDVNVKNLYWADSGDLVTI ASDTSFYILKYNRDVVSSHLDSGRPVDEEGVEDAFELLHEMNERVRTGIWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDR PMYLLGYLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERASEVLPSIPKDHHNSVARFLESRGMIEDALEVAT DPDYRFDLAIQLGRLEVAKSIAIEVQSESKWKQLGELAMSTGKLEMAEECLKHAKDLSGLLLLYSSLGDAEGISNLATLA KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFE DWQVALAVESKAIETRNVYPPAEQYISHADKSHVTLVEAFRNMQIEEEEPLENGDSNYEQTKQDEEDYTEEQEEQNDYNE EQEEQNGEEGSQEEAVVVDAESTDGAVLVNGNEADEEWGTNNEGAPSA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 912 | 911 | 0.0 | – | |
| PANTHER | 2 | 912 | 911 | 0.0 | – | |
| PIRSF | 2 | 894 | 893 | 0.0 | ||
| SUPERFAMILY | 3 | 297 | 295 | 3.0E-79 | ||
| SMART | 4 | 43 | 40 | 0.25 | ||
| Gene3D | 11 | 300 | 290 | 3.9E-115 | ||
| ProSiteProfiles | 11 | 266 | 256 | 50.674 | ||
| CDD | 17 | 297 | 281 | 2.49122E-69 | – | |
| Pfam | 18 | 43 | 26 | 0.12 | ||
| SMART | 46 | 85 | 40 | 1.6 | ||
| SMART | 88 | 127 | 40 | 8.5E-9 | ||
| Pfam | 91 | 127 | 37 | 7.4E-6 | ||
| ProSiteProfiles | 95 | 127 | 33 | 12.747 | ||
| SMART | 131 | 171 | 41 | 5.3E-9 | ||
| Pfam | 134 | 171 | 38 | 2.2E-4 | ||
| ProSiteProfiles | 138 | 180 | 43 | 13.65 | ||
| PRINTS | 158 | 172 | 15 | 1.6E-6 | ||
| SMART | 174 | 215 | 42 | 1.1E-7 | ||
| Pfam | 177 | 215 | 39 | 4.6E-6 | ||
| ProSiteProfiles | 181 | 224 | 44 | 12.514 | ||
| PRINTS | 202 | 216 | 15 | 1.6E-6 | ||
| SMART | 218 | 257 | 40 | 5.1E-12 | ||
| Pfam | 220 | 256 | 37 | 8.6E-9 | ||
| ProSiteProfiles | 225 | 266 | 42 | 15.789 | ||
| SUPERFAMILY | 227 | 494 | 268 | 4.94E-17 | ||
| PRINTS | 244 | 258 | 15 | 1.6E-6 | ||
| Pfam | 319 | 763 | 445 | 1.3E-164 | ||
| Gene3D | 590 | 798 | 209 | 5.4E-87 | – | |
| MobiDBLite | 846 | 928 | 83 | - | – | |
| Coils | 861 | 888 | 28 | - | – | |
| MobiDBLite | 864 | 890 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Structural molecule activity | The action of a molecule that contributes to the structural integrity of a complex or its assembly within or outside a cell. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. | ||
| Cellular component | Membrane coat | Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules. |
Expression pattern of LotjaGi3g1v0015600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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