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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0239700 |
Transcript ID | LotjaGi3g1v0239700.3 |
Related isoforms 5 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase family protein; TAIR: AT2G30980.1 SHAGGY-related protein kinase dZeta; Swiss-Prot: sp|Q39010|KSG6_ARATH Shaggy-related protein kinase zeta; TrEMBL-Plants: tr|G7IM77|G7IM77_MEDTR Shaggy-like kinase dzeta; Found in the gene: LotjaGi3g1v0239700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:38762739..38766884) extracted from Lotus japonicus Gifu genome v1.2.
GAATTCAAAGTATTGACTATGACTACTAAATTGGCTTTGTATATATGCATGTCCATTAGTGAATTTGCTGACTCATGCAT GTGATACATGATAGGCACATGACATTGCCATGTTAAGTAAATGCTTTTAAACAAAATTATTGATGATAATTGCTATTAAG CTAATTTTGGCTGTTAGTTAATTGAGTCAACTCGATAAGCTATCACTGGTATTGTATTATAAAGAGTTTTATATTCTATT TCTGCATTAGGAGAATTGGTTTACCATATTAAATATATATTTATTGCTATGAATTGCAGGAAATGTCAGCTTCTGTCGGT GAGGGTAATGACGCAGTTACCGGTCACATAATCTCAACCACAATCGGAGGCAAAAATGGTGAACCTAAACGGGTCTGGAT GTGTTCTAACCTTCATTCTCAAATTCCAGTTTTTAAAAATTAATTTTGTACTTAAAATTTTACTTCCTTTGTGGGATAGA GTGGAACTACATTTTGGGCTGGGTAATTAAGTTAAAATCTACCCTTTTATTAATGATTCATCCAAAAGTTTATTACTATT AATCACCTAGAAGTTGGGTTACTTTCTTGGAGCCTATCTAATCTAATAGTTCCTTTTTTTATTTTATTTTAATTCTTCCC CCCTTGTGCCAATTGATAATTTTTTGTTTCCCCTTTTGGACCCTAAAAGGTAGTCTTAAAAAATTTCAATGTTTTGAGTG ATGTATTAATAGACTATTGATGATAGCATCCTCAGGTTTCAATTTCTTTAATTGTTTCATAAATTTATGCTCTAATATCA ATTGCAGACCATCAGTTACATGGCTGAACGTGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGTAAGGATAAATG AAGTAATAAACTCGAAGGTGATATCTATTCCTACTAAGCATTCTCTGCTGTCAAGTATCTCATATTGCTTCATGCCCACG GGTTTTGTACCTTTTTGACCTGGAACAAAGGCAAAGTGCTTGGAGACTGGGGAAGCAGTGGCCATAAAGAAGGTTTTGCA GGACAAGAGGTACAAAAATCGTGAATTGCAGTTAATGCGGGTGATGGATCATCCAAATGTGATTTCCCTGAAGCACTGTT TCTTCTCTACGACAAGCAGAGATGAACTTTTTCTGAACTTGGTAATGGAATATGTCCCTGAGACATTGTACCGAGTTCTA AAGCACTACAATAATATCAATCAGAGAATGCCCCTAATCTATGTGAAATTGTATACATATCAAGTATGGAGTCTTCTCTA TTTGCAATTTGGTTTCTTATGTTGTTCCTCTCTTTTTTGTTTGTAATCTTCTAATGATTGTGTTGGGATGTGATGTTTAG ATCTTTAGAGGACTAGCATATATCCATACTGTACCAGGAGTTTGCCATAGGGATGTGAAGCCTCAAAATCTTTTGGTATG TTATTCATTTGTTACTTTTCCTCTATGATTTGCACTCTTTTATTCTAAACCTATCACATGTTTGTTCTGTAGGTTGATCC TCTCACTCACCAAGTTAAGCTTTGTGATTTTGGGAGTGCAAAAGTTCTGGTATGTTGGTCTGCATTCTTCTTGTGCTTAT CATTACTTCGTAAATGCATGATACGATGCTGTTAGTGGAATAGTGAAGTCTTGTGCTACCTATAGGTAGGTAGCATATGA CTTAAGCATGTTTGATTTGTCCAAAATTGCAATTTTAATTGTGTATGTGATGAATGACATTTCAGTTAATAGTCGTTAAA ATATATATGTTGCGATTAATATGTACCCCCCCTGATTTCTTTTTCGGCTTAAAAATATTTTTGGTAGGCCTCACATTTAT CAAAATAGTGTGTTTTTAGTCCTTCACATCTATGCTTTAAAGTTTTAGTGCTAAAAGCACATGGTTTTTGTATTTTAAAG GACTTAAAATGGAAACTTAAAATATAGAGGACTAATTTCAAAACATGTCGCATTTTTAGGGAGAAAAAAGATATTGGTTG GAATCAATGCTAATTTTGGTTACAATTATTTGGTTTAAAAAGATAAAGTATTAAAGTGTAATTGTTATGATTTTATCTCA GGTCAAAGGTGAATCAAACATTTCGTACATATGTTCACGGTACTATCGAGCGCCGGAACTAATATTTGGTGCGACAGAAT ACACAACTTCTATTGATATTTGGTCTGCTGGTTGTGTCCTAGCAGAACTACTTCTAGGCCAGGTTAATTTTTTTTTTGGG TAACTTATGCACTAATGTTGCACGTACAAAATAAATGTTTTCCCTTTGTTTTTGAGATATGTTATCTTGATTTCTCATAG TTTGAAATGTTTCTTTAGCCATTGTTCCCCGGTGAAAATCAGGTGGACCAACTTGTGGAAATTATTAAGGTGATCCTCAT TTATTCTCAGATGTCACCCTAGATTGCTTGAATATAAGTACAAAGAGATAATAATTTGGGTGTCTTTTTATAGGTTCTTG GTACTCCAACTCGAGAAGAAATTCGTTGCATGAACCCTAATTATACAGATTTTAGATTCCCCCAGATTAAAGCTCATCCT TGGCATAAGGTAATTGCATTCCCTGCCATTCCTCCTTTTGCTTTGTAACAATGGTTTTTCTGGTTGATTGATGCCATGAT TCCTGGTTCAGGTTTTTCACAAGCGAATGCCTCCTGAAGCAATTGACCTCGCATCAAGGCTGCTCCAATATTCACCAAGT CTTCGTTGCAGTGCAGTAAGTTGGGCAAACCCTTATACCTTCTCCACCTCCCTCCTTGGTGAAGGCACAAATAGAGAAAT AGCATAGCAGTAATATGTTAAACAAACCTTGATATAAAATATATTTACATACATAGTAGTCAATCCCGGATCGCGGCGCG TAGCGGCCGACCCCAAAAGTGGGATAGCGGGATAGCGGATAGCGGGATGACCGCTATTTTGATTTTTCACATATAATATT ATATAACTAATATATACATATAATTACTAAAAGAAAGGAAAAAAAAATAGAGGAAAAGAAGAAAAAAACAGAGCAACTCA GAACAGAATAAAGGCCCAAGGGTAAACAGGGGTGGTGGTCGCCGGAGCCTGGACGGTGCTTGTCAGATTGCGCCGCGGCC ATGGGTTCTGGACTTCTGGTCGAAGGTGGCTGAGGGGAAGCAAGTCGCGCCGGAGAAACGCGTTGAAGAAGGTTGCAAGT TGCAGAGGAAACGCGTAAAGAAAGAAGAAACGCGTGAAGAAGACGAGTGAAACGGTGCGTTTCACTTATTAAGAGCGAAA TTCCAAAAGTACCCTCAAATTTTAACCTAATTTACAATTTTGAGGGCAATTTGGGGATTTTCCTTGAACCCAACCCATCT TCAACCTGGAGCACCGCGATTGAACGCGATCGAACGCGATTTGGACGCGATTTGGACGCGATTTGGCCGCAATTCGCGGC GCGACAGCCGCGACGGCGTTCCGCGACGCGATCGATTCAAAATCGCGGGGAAGGGCCGCGACGCGACGGCGCTATCGCGC CGCTATTTGCCGCGATCGATAACTATGTTTACATAATTACATAAACATAAGAAGTTCCCTTGTTTCTTATATTGTTGCTC TGAGATTTGATCCACATGCCTTGGTATGTCATGTTTTAGTATGGTGGTTGATTTCTGCGATAAAGTATTTTTACCAATGA GATTCCATTATAATCACTGTTTATATTTTATTTGAAAATATTAGTATACATAGCATAGTTTTCACTAGTGGATTTTATAT TTCAGCTGGAAGCATGTGCACATCCTTTCTTTGATGAGCTTCGTGAGCCCAATGCCCGGTTACCTAATGGCCGTCCATTG CCGCCACTTTTCAACTTCAGACAGGAAGTATGTATCTAGTTGCCAAATTGGTTTCTTCTATTAACTAGTCATAGCTTCTT TTTACTGTAACCTATGTGCGCACCAGGCTTACATGGCAATTTTTGTTGAAGCGCAATTCCGATAGAGTCTGGGTTGAAAT GTTGGTAAAGGAATCAATGGTTCTAATTAAAATTATGTCTGCAGTTAGGTGGAGCATCCCCTGAACTGATCATTAAACTC ATACCTGAGCATGTGAGGCGGCAAACTGGTCTTAGCTTCCCATATCCGGCTAGCACATAAATGTAA
CDS sequence (LotjaGi3g1v0239700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGCTTCTGTCGGTGAGGGTAATGACGCAGTTACCGGTCACATAATCTCAACCACAATCGGAGGCAAAAATGGTGA ACCTAAACGGACCATCAGTTACATGGCTGAACGTGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCT TGGAGACTGGGGAAGCAGTGGCCATAAAGAAGGTTTTGCAGGACAAGAGGTACAAAAATCGTGAATTGCAGTTAATGCGG GTGATGGATCATCCAAATGTGATTTCCCTGAAGCACTGTTTCTTCTCTACGACAAGCAGAGATGAACTTTTTCTGAACTT GGTAATGGAATATGTCCCTGAGACATTGTACCGAGTTCTAAAGCACTACAATAATATCAATCAGAGAATGCCCCTAATCT ATGTGAAATTGTATACATATCAAATCTTTAGAGGACTAGCATATATCCATACTGTACCAGGAGTTTGCCATAGGGATGTG AAGCCTCAAAATCTTTTGGTTGATCCTCTCACTCACCAAGTTAAGCTTTGTGATTTTGGGAGTGCAAAAGTTCTGGTCAA AGGTGAATCAAACATTTCGTACATATGTTCACGGTACTATCGAGCGCCGGAACTAATATTTGGTGCGACAGAATACACAA CTTCTATTGATATTTGGTCTGCTGGTTGTGTCCTAGTTCTTGGTACTCCAACTCGAGAAGAAATTCGTTGCATGAACCCT AATTATACAGATTTTAGATTCCCCCAGATTAAAGCTCATCCTTGGCATAAGGTTTTTCACAAGCGAATGCCTCCTGAAGC AATTGACCTCGCATCAAGGCTGCTCCAATATTCACCAAGTCTTCGTTGCAGTGCACTGGAAGCATGTGCACATCCTTTCT TTGATGAGCTTCGTGAGCCCAATGCCCGGTTACCTAATGGCCGTCCATTGCCGCCACTTTTCAACTTCAGACAGGAATTA GGTGGAGCATCCCCTGAACTGATCATTAAACTCATACCTGAGCATGTGAGGCGGCAAACTGGTCTTAGCTTCCCATATCC GGCTAGCACATAA
Protein sequence (LotjaGi3g1v0239700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSASVGEGNDAVTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDKRYKNRELQLMR VMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYNNINQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDV KPQNLLVDPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLVLGTPTREEIRCMNP NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCSALEACAHPFFDELREPNARLPNGRPLPPLFNFRQEL GGASPELIIKLIPEHVRRQTGLSFPYPAST
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 2 | 225 | 224 | 3.5E-226 | – | |
PANTHER | 2 | 225 | 224 | 3.5E-226 | – | |
Gene3D | 19 | 113 | 95 | 5.5E-33 | – | |
CDD | 29 | 297 | 269 | 0.0 | ||
SUPERFAMILY | 33 | 318 | 286 | 1.03E-76 | ||
ProSiteProfiles | 34 | 294 | 261 | 39.849 | ||
SMART | 34 | 294 | 261 | 2.1E-71 | ||
Pfam | 34 | 294 | 261 | 5.9E-56 | ||
ProSitePatterns | 40 | 64 | 25 | - | ||
Gene3D | 114 | 337 | 224 | 2.1E-61 | – | |
ProSitePatterns | 155 | 167 | 13 | - | ||
PANTHER | 226 | 350 | 125 | 3.5E-226 | – | |
PANTHER | 226 | 350 | 125 | 3.5E-226 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0239700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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