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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0241900 |
| Transcript ID | LotjaGi3g1v0241900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ; TAIR: AT2G20560.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q5R8J8|DNJB4_PONAB DnaJ homolog subfamily B member 4; TrEMBL-Plants: tr|B7FHS3|B7FHS3_MEDTR DnaJ heat shock family protein; Found in the gene: LotjaGi3g1v0241900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:39293280..39297868) extracted from Lotus japonicus Gifu genome v1.2.
CGGAAGACTTCGGGTACACCCAAAATTCATTAAATTAATTGTATTAAAATAAATAATATAAAAATATATAAAGTGTAAAA ATGAAATTGTAATTTTCTTTTCACTTTCTATTCAACTAACATAGTAGTGTTTACATCATTTTTCTCCTTTGCTCCTATCA AACTAAACAACTTACTAAATGTACTATATTTCACAATTCAACCTCTTCAATCTCTACTCATTTGGTTTATTCTCTCTTTC TCTTCTCAACAAAACATAAACATCCTAAAAGTTTACAATCACTATATTTTCGAAAGAGAAGTTCTAAGAAACCATTTTTC CAACATTTTCCTAAACACTGTTTTATTAATTGTTTAAATTTCATATGAGCCTCATTAATATTTTTAGTGAATTGAAATTA AATTTTAACATAGCATATGTCGTGCTGGGATCCTTTCAAGTGTAAAAAAACTTGAGAGAGTCAAGTTTTACCATCACACA TTCTCACCATTAACCTTTGTGTAGATAATATGTGAAGAAATAAAATTAAATTAAATCAATGGTGAGATGATGAAACTTGA CACTTGATGTTTGGTAGAAGGTTGGAAAATACATTCCCAAGAATAATATTCGGAGTTTGATTGTTGGGAATATCATTTCT GGGTAAGACTTAAGGTGTGTTTGGTTAAGATTTAAAATTCCCGGGAATATTTTTAAATTTTATTTAATTTAAAAATTCAA AAATTCAAAATGATAAAAAAGTTACATTCACTTTTCAGGAATGCAAGATTCTCACCTCATTTCATGAGAATCAAATGACG GAAGTTATGGAAGTTATGTCATTCCCGAGAATGTTTTATGGCCGAACATCCAATTTACAACCCCATAACAAACACGGGAC TATAATTCCCTACCTCCACATTCCCGGATATAAATTTCTCAATCTTATACCAAACGCCCTCATTTCCGAAATTACCTTAC CCTAGAAAAATCAACAGTGAGTTTGTGAATTTCTGGAACATTCCACGGAGACCGAGGTGTCACGCATCATGTAACTCGGT AAGCTTCCAAAACGTTAAAGATTTAACAATTCTTAGACACGATCATCACCTTCAGATTCTCTGCACAAGCTCTATGAACT GTGAAGAACATAGTAGAACAAAAGAAGGAGAAGAAGAAAAATATTGTGAAAGTGAAGAAGAGAAACAGAGAAGAACAACA ACAAGCACCAGCACCAGCACCATCACCCAAGATGGGTGTGGACTATTACAAAATCTTGCAGGTTGATAAGATTGCTACAG ATGATGACTTGAAGAAGGCTTATAGAAAACTCGCCATGAAATGGCACCCTGATAAGAATCCAAGCAACAAAAAAGAAGCT GAAGCTAAGTTTAAGCAAATTTCAGAAGCCTACGAGGTATGTTTTTTTTCTCAAGGGTATTGCAATTTTTCTTTTTGTTC TGAAATTATGAGTGGGGAAAAAATGAAACCACATGAAATTTTTTTATCTGGGTGATGCTTATGTTTTTCTGTTTTCTTCA AATTCTATTTTCAATATGGGTACTGCAAAGTTTTTAGCTTTCTCAGAAGTTGGGAGTAGAAAAGTGAAATTCAATCATAT GGGTACTGCAAAGTTTTTAGCTTTCTCAGATGTTGGGAGTAGAATAGTGAAAATTCAATCAAAAAATTCATCTGGGTGAT GCTTAAGTTTGTGATTCTAATGTTTCTTCACAAGGTTATTGCAAATTTGTTAGCTTTATGTGAAATTAGGAGTGGAACAA TGAAATCCAATAATAAATTTTAGCTGGGTGATGCTTACTTTGTTTCTGTCTTGATTAGGTGCTAAGTGATCCTGACAAGA GAGCTATCTATGATCAATATGGAGAAGAGGGTTTGAAGGGTCAGGTTCCCCCTCCTGATCCTGGTGGTGGTGGTGGTGGT TGTGGTGGCAGCACTACTTTCTATTCCACAGGAGATTTCCCAGGATCGTTTCGATTCAATCCAAGGAATGCTGATGACAT TTTTGCAGAGTTTTTTGGGTTCTCAAGCCCCTTTGGTGGCATGGATGGGAGAGGTTGTGGTAGTGGCATGAGATCCAGGT TCTCTGGTGGTATGTTTGATGATAATATGTTTGGATCTTTTGGGGAAGGTGGAAGAGTAAATGTGAATCAAGGTGCAACG CGCAAAGCTCCTCCCATTGAGAATAAGCTTCCCTGTACACTTGAGGAGATATATAGAGGGACAACAAAAAAGATGAAGAT CTCTAGAGAGATTGCAGATGCCAGTGGGTGAGTAGTTGTTATTACCTGGCTATTTCTTCAGCTATTTGAGGATATTTTAG CTTTTTGGTCCCCACCTCAGTTTGTTATTATGGTTGGTTTTGGTGCATGATTGAAATTATTGAATTTCAATTTGGTAGCA AGTAAAAACAAATATGGATCCACTACCCCAGTATGTCATTGGCACCCTTTCCGGTAGGTCTTGAGGTGCCTCTCCGAGCC CTACCGTTTTTTAACCAAAAAACAAACAAGACAAATATGGATCCACTGAAGGAAAAACTAATATGACCATAAAATATGAA ATTCTCCCCACAAGGATTTGCTAGTTTCATGTGGTTGTGTTGAGTGCTTGGCTTGAAAAATCAAATTCGAGAAAGTACTT GCTAATTGGCTGTCCATTGTAGGTGGCCATTTGGCTGTTGAGTTTCCTTTCTATGTCTGTACATCTATTTCGTTGATCAA GCCTTTGTCAATAGATGTTTTTGTTTACATAATAGTCAATGCATAGACTGTCATTTTGTTTCTTTGTTCCTTTTGCCTAT TTGTTTGAAGAAGTATGCATGGTAGTTTCTAGTGACTGTTTAAACAGTTAGGTGAACATTAGATGCTTTCTACTTCGAAG TTTCTTCCCTGTAAAGTCTGTATTCCCTCTACATATATCTGTGCTTAAGACATGCTGTAATTGCTTACTGATGACATGAT TTTTTCTCTCAAAGTTACATGTTTGGTACAAATTTTAGGAAGTGCGGTAGGGGAATGGAGGGAACCAAAACCCCTCATAA TCAATTTTATCTCACCTCCAAAAGTGCTCCGGATTTGGAGGGAAAATAGTTTGTATGTCAAAAAAACATTTTCCCATTTT AAACTGCATTTTAAGAGTAAGGTCAATAAAAGTAAATTTTGTTTTAAAATCCCTCCCCTGCCCCCTCTTATGAGGATTGA GATAGGGGAGGGATGCGTGTGGGTGCCACTCCAACATGACTAAAAATTATATTAATGTAGAAATCCCTATAACGGACCAG TCTTGTATCTTTCTATGAGCAATGCTGTTTAGGCCTTTACATACTATTAGAGGTACACTTCTATAATGCTGACTACTATA GCTTGGAACCTGGAAATTCCCTCAGTACTACATAGCATATTTTCCATGTTGGTTTGGATTTCCTTAATTTAACTCCAATT AAGAGATCTTGTAAATTTTACTAGATGTTTGGCTAAAACTTGAAATGGTGCACTGATTTGTAATCCCCTTTTTAGCATCA AAAGTACATAAGATTTTATACACACACAATCTGTTTGATGCTGCACTGATTTGAGTGGGTACTTTTTATTTCTCAAATTG TGTAATATCCATACAGGATGAGATAGCATCTTCATTCCAGATTGTATGCTCAGTTTCTTTTCTGATATGATGTTTGTTTA CCTTCATTATCGAATTAAGGACTTCTTATCGAATGCAGCAAAACCATGCCCGTGGAGGAGATCTTGACCATTGATGTTAA GCCTGGTTGGAAGAAGGGGACAAAGATCACATTCCCAGAGAAGGGTAATGAACAGCCAAATATAGCACCTGCTGATCTTG TTTTTGTCATCGACGAAAAGCCGCAGAGTGTTTTCACCCGCGATGGAAATGATCTGATTGTCACCCAGAAGATATCACTT GTCGAGGCCTTAACTGGTTACACAGTGCAGCTCACTACCTTGGATGGTAGAAACTTAAGCATACTAATCAACAATATTAT CCATCCCAACTATGAGGAGGTTGTCCCAAAAGAAGGAATGCCACTCTCTAAGGATCCATCAAAGAAAGGGAACTTGAGGA TAAAATTCAACATCAAGTTCCCAACTCAGCTCAATGATGAACAAAAAGCAGGAATCAGGAAACTCTTGGCTGCCTCAGCC TGAGATTGAATATAGATGGTATATAGTACTTAGATATGCCAATAAATTTGGTTGTTCTATATGTATTGTAGCTTAGTCAC AAAATTTTGATGAGAAATTTCCTTTTTCATGGTTTTCTCACAGCTTTTAAATTCTTTTAATCGCAGTGATCAACAATCAT TGCCATGTTCAAATTAAAAGAATGAGCTTCTAGTAGTGATCTATCTATTATAATATATAAATTCTAAATCTATCTATTAT AATATATAAATTCTAAAGCGTGTATTGTAGCGCTAACAACTCATCTCTTTTAGGTCCAATGTTAGATCTTACAATGATGT GTCAAGCATTTTGCTTTCTTCACAACTCTTTCTTTGCATCTTGAACTTTTTTACGGCTTCGTTTGGTTGGAGGGAGAGGA AAGGAAAGGGAAAGAAAACACGAAAATCG
CDS sequence (LotjaGi3g1v0241900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGTGGACTATTACAAAATCTTGCAGGTTGATAAGATTGCTACAGATGATGACTTGAAGAAGGCTTATAGAAAACT CGCCATGAAATGGCACCCTGATAAGAATCCAAGCAACAAAAAAGAAGCTGAAGCTAAGTTTAAGCAAATTTCAGAAGCCT ACGAGGTGCTAAGTGATCCTGACAAGAGAGCTATCTATGATCAATATGGAGAAGAGGGTTTGAAGGGTCAGGTTCCCCCT CCTGATCCTGGTGGTGGTGGTGGTGGTTGTGGTGGCAGCACTACTTTCTATTCCACAGGAGATTTCCCAGGATCGTTTCG ATTCAATCCAAGGAATGCTGATGACATTTTTGCAGAGTTTTTTGGGTTCTCAAGCCCCTTTGGTGGCATGGATGGGAGAG GTTGTGGTAGTGGCATGAGATCCAGGTTCTCTGGTGGTATGTTTGATGATAATATGTTTGGATCTTTTGGGGAAGGTGGA AGAGTAAATGTGAATCAAGGTGCAACGCGCAAAGCTCCTCCCATTGAGAATAAGCTTCCCTGTACACTTGAGGAGATATA TAGAGGGACAACAAAAAAGATGAAGATCTCTAGAGAGATTGCAGATGCCAGTGGCAAAACCATGCCCGTGGAGGAGATCT TGACCATTGATGTTAAGCCTGGTTGGAAGAAGGGGACAAAGATCACATTCCCAGAGAAGGGTAATGAACAGCCAAATATA GCACCTGCTGATCTTGTTTTTGTCATCGACGAAAAGCCGCAGAGTGTTTTCACCCGCGATGGAAATGATCTGATTGTCAC CCAGAAGATATCACTTGTCGAGGCCTTAACTGGTTACACAGTGCAGCTCACTACCTTGGATGGTAGAAACTTAAGCATAC TAATCAACAATATTATCCATCCCAACTATGAGGAGGTTGTCCCAAAAGAAGGAATGCCACTCTCTAAGGATCCATCAAAG AAAGGGAACTTGAGGATAAAATTCAACATCAAGTTCCCAACTCAGCTCAATGATGAACAAAAAGCAGGAATCAGGAAACT CTTGGCTGCCTCAGCCTGA
Protein sequence (LotjaGi3g1v0241900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVDYYKILQVDKIATDDDLKKAYRKLAMKWHPDKNPSNKKEAEAKFKQISEAYEVLSDPDKRAIYDQYGEEGLKGQVPP PDPGGGGGGCGGSTTFYSTGDFPGSFRFNPRNADDIFAEFFGFSSPFGGMDGRGCGSGMRSRFSGGMFDDNMFGSFGEGG RVNVNQGATRKAPPIENKLPCTLEEIYRGTTKKMKISREIADASGKTMPVEEILTIDVKPGWKKGTKITFPEKGNEQPNI APADLVFVIDEKPQSVFTRDGNDLIVTQKISLVEALTGYTVQLTTLDGRNLSILINNIIHPNYEEVVPKEGMPLSKDPSK KGNLRIKFNIKFPTQLNDEQKAGIRKLLAASA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 349 | 349 | 1.2E-171 | – | |
| PANTHER | 1 | 349 | 349 | 1.2E-171 | – | |
| Gene3D | 2 | 135 | 134 | 1.7E-35 | ||
| SMART | 3 | 62 | 60 | 5.8E-31 | ||
| SUPERFAMILY | 3 | 97 | 95 | 2.22E-31 | ||
| ProSiteProfiles | 4 | 70 | 67 | 25.043 | ||
| CDD | 4 | 59 | 56 | 8.62005E-27 | ||
| Pfam | 4 | 67 | 64 | 8.2E-28 | ||
| PRINTS | 6 | 24 | 19 | 4.3E-29 | ||
| PRINTS | 24 | 39 | 16 | 4.3E-29 | ||
| PRINTS | 42 | 62 | 21 | 4.3E-29 | ||
| ProSitePatterns | 47 | 66 | 20 | - | ||
| PRINTS | 62 | 81 | 20 | 4.3E-29 | ||
| MobiDBLite | 72 | 92 | 21 | - | – | |
| Gene3D | 171 | 253 | 83 | 1.1E-31 | – | |
| CDD | 173 | 336 | 164 | 3.77546E-48 | – | |
| SUPERFAMILY | 174 | 253 | 80 | 5.76E-15 | ||
| Pfam | 175 | 333 | 159 | 8.8E-42 | ||
| Gene3D | 255 | 334 | 80 | 9.6E-26 | – | |
| SUPERFAMILY | 256 | 342 | 87 | 1.7E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi3g1v0241900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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