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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0312000 |
Transcript ID | LotjaGi3g1v0312000.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Receptor-like kinase; TAIR: AT4G23180.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 10; Swiss-Prot: sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10; TrEMBL-Plants: tr|V7AN77|V7AN77_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0312000 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:66048324..66052921) extracted from Lotus japonicus Gifu genome v1.2.
GGCGTAATTGCAGTCACTAATTTTCCTAATCTCCTAATCTTATCACAATCACTTCTTCTCCTAATTTTCCTCCACAAATC TTATCTTATCAATCATCATCCTCGAGTTCAAAAAAAAATCATCATCCTCAACACCATATCATCTGCATCCTCAACATACA GACCATAATCCCCAACTTCTTCTTCCTTTTTCTATATCCCATCTCTCAACCCTAACCTCCTCCTCATTCTCTCACCCACT ACAACCCCCAACTCTGCAAATCAACCCCACCACTCCCACGACTATCACCCCACTCCCCTCCCCCAAACCCAGAAAATTTA CCCATAAAATAGACTTTTCCAAAACAACAATTTCAATTTCAATCTTCTCATCTCATCTTTCTCAAATGGCCAACCCTGAT GAAGTCTGTGCCCTCTACCGCATCAAACTGCACCTTTTCGGCGAACTCTCTCCCATCCTGATCCGCACCACCACCCAAGA AGACAACGACTTCACCTTTCAATTCGATCTACCAAACCCTAATTCATCTCAATATTTTACTTCAGATCCAACCGATTCAA TCTTCGAATTTGACACCAAACCCCAAATATTTGACATACAAATCGAATCTCCTAAACCTATACCCGTCCAGAAGAAGCAA CCTACACTGAGTCAACGAAAATCACTCGAGATCTCTCTTCCCAAGAAAACAACCGAGTGGATCCAGTTCGGGGAAATAGC AGAGAAGAGGAGAAGGAGAAAGAGAAGAGGAGAAGGGTTTGGAACAATGGAATCGAAACCCAGAATCCAGAATCTTACTC CAGGTTGAGGTCGAGGCAGAGGCCAGCGGTGGTGGTGGAGATCGGAGGAGGAGGCGTTGATGTCGAGGTAGAAGCCAGCG GCGGTGGTGGCGGGATCACTCTCCTTCCCTTCTTCCTTCTCTTCTGCGTTCTTCTTCCTTCTCTTGCAACTTTTTCCCCT TCCAGATTAGTTTTAAGGTTTAATTAGAATAGGTTTTGTTTTTATTGAAATGAGATGGAATTAAAAATAAATGAATAACA TTAGTTTCTAATTAAAGAAAAAGATAAAAGCCACATAAATTAAGTTTTGGAATTTTTCAATTAAAAAAAATTTAAAATGC CACGTGGAAAAGCTGAGTAGGCTACACTTCAGCATCAGACACATTTTGTCCTTAATTAAATTAAAAAAAATTTCTTAGGG ACTCAATTTGATGCGAAAATTTTTCAGGCCCTAGAATTGATTCCCTTTACAATTTCAGGGGCCTTTTGATGTATTAAGCC AAAAAAAAATGAGAGGTTTGATCAGGAAAGCAACTAAGGAGACCAATCAGTTGTTCTATATGAGTGAGTTCAATTTGAAT TCTACTCTGAGAGTGTATGGACTAGTGCAATGCAGCAGAGATCTTACAAATGAGGGGTGCAGGCAGTGTTTGGAGGCCAT GTTAACTCAGGTTCCCAAATGTTGTGAAAGAAAGATTGGGTGGCAGGTTCTCACTATAAGTTGTGGGATACAGTATGATG ATTACAACTTCTACACTTTTAAGAATCAAACATCTTCAGTTCCTGTGCCTAATTCACAAACAGGTCACACATTAAATGCT TCTTTGTTCTCTTGTAATTACTAATTATATAACAATTTATTTCTGCTAGCACAAGAATTCCCTTACCGTGTTTGGATCCA TCTCTCTTTCCTCATAATAAATTCTGGCATCCACAAGCTACTAAAAAAAGCTTCTACCCATAATTCATTTTGGTTTTAGA ACTGATTTTAGTTTCAGAGTTAATTGTAGAAATATTTCCAAATATTCAGATAATAACCATGTTATTTTCTTATGCTATTT CAGCCGGACAAGGGGGTACTAGTAAGTCAAGAAACTTGATCATTGGCTTCAGTGTGCTGGGGTCAGTAACTCTATTAAGT TTGAGTGTTTACTGCTTCTGGTGCAGGAATAGAGTTAAAAAAGGTGATTTCCTACAGCAACATATGCTTACATTTGTCTG AATTAGCTTATTTCACATACTTTATAATATATATAGGGTCATTTAGTTCAAATATAAACTCAATAAACTTCTCTTTGTAG ATTGGCTGACACCTGACAGTGACACCATTCCTCTATCTTCAAATGGGGAAGCTCTGAACTCAGACCTGCCTACAATCCCA TTAATCAGAATCCTGCAGAGTGCAGAGCACTCATCATTTTTCAGAGGCATGTAAATTAGGGGAAGGTGGTTTTGGCCCTG TTTACAAGATACTACCTCAATTCCTTTTGTTATTTAAAGTTATGCGCACAGTTTAAAAACTCCTTATTGATACAAACTTG ACTAAAAGACCTTTATTTAATTAGTGGATTATGTTTTAGAGAGAATGGTAGTAATTGGTTGAGTTAATGAGGAGAGCGGT GATTTGTGAAAATATGAGGTGATTGGTGAGTAATATAATCATAATAATTGGTTCAACATGGGTACTACTAATGATGTGGA ACTTTAGCTATAGGTTCTTTGTTATTGTCACCTTTTCCTAAATGATTTTACATTCATTTCAATCATTTTTTCAGGGAACT CTGCCAGATGGAAGAAAAATTGCAGTCAAAAGGCTCTCAAAATCTTCTGGCCAAGGCTCAGAGGAGTTCAAGAATGAAAT AATGTTCATAGCTAAATTGCAACATCGAAACCTTGTAAGACTGTTGGCTTGCTGCTTGGAACAAAATGAAAAGCTACTTG TGTATGAATACATGTCCAATGCAAGTCTTGACTTTCACTTGTTTGGTATGTTTTCATTATTGCTTTTTAGTTTTTAATAA TCATTTTAAAAAAAATTACTGTGCATTATAGGCTTCTGCTTTAGGTGATAATGATGTGGGCTTTAAGGTAGTTGGGAGTA GGTTACAACTTTATTGTATATTATTGCCAGTTAGATGTAAGTATCCCGATTCACGAGTTGTGCACTATGACATTGATATC TCTTGCTCTTAAGGGAACAGCTAATGATCATAATATCCAAGTAAGCTAAGGCCAATTTTCTTTTCCTGATAATTGTATGG AACTAAATTCAAGTTACCTTATGTAAACTGTAGTCATGTTATAACTTGAAAAATATCCAAGAAAGGGTATTACTAGAAAA GTATGGTCTTTTTTCCATGCTAAGGCCAGTACTTAATATTTGGCATTTGGGATTTCTATTTCAAATATTTAGTGATCTTT TTTCTTAGGATTTGCATTTGGGAGTTTCTTTAAGTTTTCTATTTCAAATATTTAGTTATTTTTTTTCTTAGGATTTATAT ATCGTGGATCAAGAAAAATCTGGTTCACAAGTTAAAAGAGTTTCTCTGCAAATCTATTTTAGCACATAAGAAGCATATTG TAAATAATGTGTACTTAATGTTAGTAGTAAAAACATGGTTCATAGATGTACCAATTTTTGACAAGGTCCACCATAGAATT GTCATTTTTCTTATCAAATCTTTTCTGTCCTTTTGTTGACAGATGATGAAAAAAGAAAGAAAATCGATTGGAAACTAAGA TTAAGCATTATGAATGGAATAGCTAAAGGTCTTCTATACCTTCATGAGGACTCTCGGCTAAGAGTAATCCATAGAGATCT CAAAGCTAGCAATGTTCTATTAGACCAGGAAATGAATCCCAAAATATCAGATTTTGGATTGGCAAGGGCATTTGAAACAG GCCAAAACCAGGCAAATACAAGAAGAGTAATGGGTACCTAGTGAGTTCCACTTACACCTCACATTTATTTTATCAATAAG ATTTATTACTAATGCAGTTTTAAGCACTTAATTAGTTGAAAAAGAATAAAATTTCCCCTAGTCCTAAATTAATCTATGAT TTAAGAGAATACTAACACAAAGTTGAACTGATTTCAATAGTGGATACATGGCTCCAGAGTATGCTATGGAAGGATTATTT TCAGTTAAATCCGATGTTTTCAGCTTTGGAGTACTTGTTTTAGAAATCATTTGTGGGAAAAAGAACAGTGGATTCTATCT GTCCGAACATGGTCAAGGCCTTCTCTTATATGTAAGTTTTTCATTCATATCTGATCAAGAATGTGTTAACTAGAACTTAT ATAGCAACATTCACAATTACTTGCAGACATGGACAAAATGGTGTGAAGGAAAATGTTTGGACTTAATGGATTCCCAATTG GAAAAATCCTGCATAACCAGTGAAGTTGTGAACTGCATACACATTGGCCTATTGTGTGTTCAAGAAAATGCAGCAGATAG ACCAACCATGTCAAATGTTGTAGAAATGCTGGGGAGTGACACAATTACCCTTCCAAAACCTAAACCCCCTGCATTTTCAG TTGGAAGAATGGGCCCAGAGGATGCATCTACTTCAAGAAGTTCCAATAATCTTTCTATTAATGATGTAACAATCTCTAAC ATTCTACCAAGGTAATTAAGGGACGCCGAATAAAAACATATTTTCTTTGTTGCTCCCAATAAATGGTAATCTAAATCTTG AAGATGATTGTTACAAAATACCTGAAATAATATGAACTGGAAAGTAATTATCAAATTCTGGAATAGGGGAATGTATCTCG GTTTATTTTGTGTGCATTTTTTTTTCTTGTCATCACCC
CDS sequence (LotjaGi3g1v0312000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTTTACATTCATTTCAATCATTTTTTCAGGGAACTCTGCCAGATGGAAGAAAAATTGCAGTCAAAAGGCTCTCAAA ATCTTCTGGCCAAGGCTCAGAGGAGTTCAAGAATGAAATAATGTTCATAGCTAAATTGCAACATCGAAACCTTGTAAGAC TGTTGGCTTGCTGCTTGGAACAAAATGAAAAGCTACTTGTGTATGAATACATGTCCAATGCAAGTCTTGACTTTCACTTG TTTGATGATGAAAAAAGAAAGAAAATCGATTGGAAACTAAGATTAAGCATTATGAATGGAATAGCTAAAGGTCTTCTATA CCTTCATGAGGACTCTCGGCTAAGAGTAATCCATAGAGATCTCAAAGCTAGCAATGTTCTATTAGACCAGGAAATGAATC CCAAAATATCAGATTTTGGATTGGCAAGGGCATTTGAAACAGGCCAAAACCAGGCAAATACAAGAAGAGTAATGGGTACC TATGGATACATGGCTCCAGAGTATGCTATGGAAGGATTATTTTCAGTTAAATCCGATGTTTTCAGCTTTGGAGTACTTGT TTTAGAAATCATTTGTGGGAAAAAGAACAGTGGATTCTATCTGTCCGAACATGGTCAAGGCCTTCTCTTATATACATGGA CAAAATGGTGTGAAGGAAAATGTTTGGACTTAATGGATTCCCAATTGGAAAAATCCTGCATAACCAGTGAAGTTGTGAAC TGCATACACATTGGCCTATTGTGTGTTCAAGAAAATGCAGCAGATAGACCAACCATGTCAAATGTTGTAGAAATGCTGGG GAGTGACACAATTACCCTTCCAAAACCTAAACCCCCTGCATTTTCAGTTGGAAGAATGGGCCCAGAGGATGCATCTACTT CAAGAAGTTCCAATAATCTTTCTATTAATGATGTAACAATCTCTAACATTCTACCAAGGTAA
Protein sequence (LotjaGi3g1v0312000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MILHSFQSFFQGTLPDGRKIAVKRLSKSSGQGSEEFKNEIMFIAKLQHRNLVRLLACCLEQNEKLLVYEYMSNASLDFHL FDDEKRKKIDWKLRLSIMNGIAKGLLYLHEDSRLRVIHRDLKASNVLLDQEMNPKISDFGLARAFETGQNQANTRRVMGT YGYMAPEYAMEGLFSVKSDVFSFGVLVLEIICGKKNSGFYLSEHGQGLLLYTWTKWCEGKCLDLMDSQLEKSCITSEVVN CIHIGLLCVQENAADRPTMSNVVEMLGSDTITLPKPKPPAFSVGRMGPEDASTSRSSNNLSINDVTISNILPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
ProSiteProfiles | 1 | 271 | 271 | 31.849 | ||
Gene3D | 3 | 70 | 68 | 4.1E-26 | – | |
CDD | 5 | 266 | 262 | 9.60112E-91 | – | |
PIRSF | 5 | 275 | 271 | 1.3E-31 | – | |
PANTHER | 6 | 278 | 273 | 1.4E-123 | – | |
PANTHER | 6 | 278 | 273 | 1.4E-123 | – | |
SMART | 10 | 266 | 257 | 6.4E-18 | ||
SUPERFAMILY | 11 | 299 | 289 | 4.45E-72 | ||
Pfam | 17 | 266 | 250 | 2.8E-45 | ||
Gene3D | 71 | 272 | 202 | 8.8E-59 | – | |
ProSitePatterns | 116 | 128 | 13 | - | ||
Pfam | 268 | 313 | 46 | 9.9E-12 | ||
MobiDBLite | 274 | 299 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0312000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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