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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0376900 |
| Transcript ID | LotjaGi3g1v0376900.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Homeobox leucine zipper protein; TAIR: AT4G00730.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein; Swiss-Prot: sp|Q0WV12|ANL2_ARATH Homeobox-leucine zipper protein ANTHOCYANINLESS 2; TrEMBL-Plants: tr|V7ANR5|V7ANR5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0376900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:76955279..76959966) extracted from Lotus japonicus Gifu genome v1.2.
TGTTCCTTACAGCAACGGCAACACCACCAACGATAGAATGGCCTTTGGTGCAATCTCTCAGCCACGCCTGGTGACTACTA CTCCCTCTTTGGCAAAACCCATGTTCACCTCTCCTGGATTGTCTCTGGCACTTGTGAGAGATCTTGTTAGCTTTCTTAGT TCCCCTTTGCATTTCTTGCTGGTAGTTACCTTGTTCTTGTTATGTTTCCTGATTTGTTTTCCTTTTTGTTTTCTGTGTTT GGAAAATAAATTCAAAAGCAGCAAAGCAATATAGATGGACAAGAAGATGTGAATAGAATGTGTGAGCCAAATGGTTTGAA GAGGAGCAGGGAAGAAGAGCAAAGCAGATCTGGCAGTGATAACATGGATGGTGGTGCTTCCTGTGATGAACAAGATGCTG CCGACAATCCTCCTAATAAGAAGAAGCGTTATCACCGACACACTCCTCAGCAGATTCAAGAGCTTGAAGCGTATGCTATT TTGGTCCACCGTGTGTTTGTTTTTAAGGTTTATTTACTTAGATTCTGAATGATGATTGTTTTTTTTTTTTTGGTAAATGG GTTTTAGGTTGTTCAAGGAGTGTCCTCACCCAGATGAGAAGCAAAGATTAGAACTCAGCAGAAGGCTTTGTTTGGAAACT AGGCAGGTCAAGTTCTGGTTCCAAAATCGGAGGACCCAAATGAAGGTACATTTTCTCACATGGCTTCTTTTAATGGACCA TCATGAAACTTTTATTACTTTTGTTAATAGATTTATTTGGTTGTACAATTGTACCAGACTCAATTGGAACGCCATGAGAA CACGCTGCTTAGGCAAGAGAATGATAAGCTGAGAGGTGAGAACATGTCTATTAGGGACGCTATGAGGAACCCAATTTGTT CAAACTGTGGGGGTCCAGCTATGATTGGTGAGATTTCAATTGAGGAGCAGCATCTTCGGATCGAGAATGCCCGATTGAAG GATGAGCTAGACCGGGTTTGCGCGCTCGCGGGGAAGTTCTTGGGTCGCCCCATTTCGTCATTGCCGAACTCAAGTTTGGA GCTTGGTGTTGGGGGAAACAATGGTTTTGGTGGGATGAACACAATGCCTGATTTTGGGATGGCTAACTCTTTAGCCATGG TGTCTCCTTCAATAAGACCATCACCGACTGGGGTTACTTCTGGATTTGTTGATAGATCAATTGAGAGGTCTATGATTGTT GAGCTTGCTTTGGCTGCTATGGATGAATTGATGAAGATGGCGCAGACCGGTGAGCCTCTCTGGATGAGGAATGTTGAAGT GGGGAGGGAAATTTTGAACCATGAGGAGTACATGAGGACATTCACTCCTTGCATTGGGATTAGGCCTAATGGTTTTGTCT CTGAGGCTTCTAGGGAGACTGGAATGGTCATCATAAACAGCTTAGCCCTTGTTGAAACTCTCATGGATGCAGTAAGTTAT ATTAAACTAGTAATTGGGTAAAATTTGTGTTTGAATTGTTTTCATTCTATGTGGAAATGTGTACAACATCAAATTGATTT GCTTTTTCGCCTTCGCAGAATCGATGGGCAGAGATGTTTCCTTGCATGATTGCCAGAACCGCCACCAACGAAGTTGTATC CAGTGGGATAAATGGAACCAGAAATGGTGCACTTCAACTAGTAAGTTCAATTTGTTGTATGGAACACTGTTATTAATTTT AGTAAAGCTTTTCTTTAATTTGTTAACCCATCAATTATGTGCACAGATGCATGGTGAACTTCATGTTCTTTCACCTTTGG TTCCGGTTCGCGAGGTCAATTTCCTCCGATTTTGCAAGCAGCACAGAGAAGGTGTGTGGGCTGTGGTGGATCTGTCCATA GATACCATCCGAGAAGGTTCGGGCGTGCCTAGTTTTGGTAACTGCAGGAGGCTTCCTTCTGGTTGTGTGGTGCAAGATAT GCCTAATGGTTATTCCAAGGTAAAATTTCCAAATGTTCTTTCTGCTTGTTATAACAATTGGATCAGCTTATTTTTGCTTG GAAGCTACACAATTGTTTTTGTTTTAGAATCAATTGTAGGAGAGTTTCTAAACATAATTTAGAGGACAGTAAAAATGATT TACAGTCATCCACGCTTTGTGTCCTAAACATTTTATAGACACACACAAGGGTTGTACTAATCACCATGCAACTATTTTAT GAACCTTACTAAAGTACAGTGTTTAATGGAGCCTGTTTAATCTCTCTTGATTTCATGTTTTTATTTTTAAAAAATTATTA TAATTACCTTCAAGTAACTGGATCATGAGAGCTGGTAGAATATTCAAGTGAAGCAAACACCAGGCCAAGGAATCACGGGG CTTTTGCTTTTCCAAGCCATTAAAAATCTCCTAGTTCCAAGCAACTTAACTAGCCTAGTGACTACTCACTCTAGAACTAC TCTGTCAGTGATAATTCCCATATTCCTCTTTTCAATAAATTTGGACAATTGCATTGCAACTGAGCAGTGTGCTTCTTCTT GTCTCAATCAAAGCATTAATATAATTCTACACTGAGCTTCTCAACAATTCATCTAAAATCCAACAAACTAGTATATTTGA ATAATACCCCTCATCATGTGGTCCAGGTCCAGAAAATTTTCATTAATTTAATCATAGAAGCCTCTGTCACTTGATATTCT GCACCACATTAACTAGATAGTAGATATCCTTTCCTAAACAATTTATCTTGTAATCTTCCAAGTACTTTTTGATTCTATAA ACAACATATATGATGTTTCTATTCCAATCAGACAATTCCCCAGAAGCATTATTTAATTCCAATATAACAATAATAATAGC ATAGTTTTGAAATCCAAACCCTTGGGGTTGAAAATCAAAGAGTGGCTATTTTGTCTGTTTCTAGTGAGTACTGTATTAGT TTTGAGTTTAGTTACATTGGCAAATCTCGATGCTCATAGTGTCACTACCCCCTTACTTGACTTTTTATGTTGTACCAATA TTTTATCTACTTGGTAGAGATTCATTAGATACCTTTGTCTCAACCCCTTGTCCAATAATGGTATTTTAATCAAATTATAT ATTAATTAATAAACTCTTAAACTTTGTGTGCAATCTAACGACCCTTTAATTTTGCGTTTCATTTAATTTACAGGTGACAT GGGTGGAGCATGCAGAATACGACGAAAGTCAAGTCCACCAGCTGTACAGACCCTTATTGAGCTCCGGCATGGGGTTTGGA GCACAACGCTGGATCGCCACCTTACAACGCCAGTGCGAGTGCCTCGCCATCCTCATGTCCTCTGCACCACCCTCCATCAG AGACCACTCCGGTAACATTATCTTATATTTTTAATTTAATGAAGGTTGGATATAATAATGAAATTATTTAAGAATTTTTT TCTAAAGTTATTAATTGTGGTGGTGGTGGATCCGGAACAGCACCGATTACAGCAGGGGGAAAGCGCAGCATGCTGAAGCT GGCGCAGCGCATGACCAACAACTTCTGCGCCGGGGTGTGCGCCTCCACCGTGCACAAATGGAACAAGCTGAATCCGGGCA ATGTGGAGGAAAACGTGAGGGTGATGACACGGCAGAGCATCGACGATCCCGGTGAGCCACCGGGGATCGTGCTCAGCGCT GCCACGTCTGTGTGGCTCCCTGTCTCCCCTCACCGGCTCTTCAATTTCCTCCGTGACGAGAGGCTCCGGAGTGAGTGGGA CATACTCTCCAACGGTGGTCCCATGCAGGAGATGGCCCACATCGCTAAGGGTCAAGACCATGGCAACTGCGTCTCTCTTC TACGAGCTAGTGTAAGATTGTTTTCTTTTATCAAATGACCATAATGCCCTTTTCCATGTCAATGAGCTTTCTTTGTCGTT TATTGTTTGGATTGGAGAGGTTGAAAATATGAAAAGGACAAAGGAGGAAATTTTTTAGAGGCGCTAATTTTGATGAAGCG GTAAAATAAGAAGATTTTATAACAAGTCAAAATAAAAGGACATGGTACTTTCTGACATCATTGTCTTTTTATTTATTTTT ATTTTTTGAAAATTAAAAATATAATATAGGAAAAAGTTGAATCAGGGTTTGACTAAAACGAAATGACAGGGTTTCTTACA TCATTATTTTATTTCATTTTTATTTTTGGAAATCAATATAACTTCATGAAAATGACAAGATGCTATTACTATATTATACT GAAATAAAAATATTTTTGTATTAATTGATTTATAATTTATTTTTATTTTGCAGGCAATGAATTCGAACCAGAGTAGCATG TTGATACTACAGGAGACATGCACAGACGCGTCGGGGTCGCTTGTGGTGTACGCGCCGGTGGATACTCCGGCCATGCACGT GGTCATGAATGGTGGCGATTCTGCTTATGTGGCGTTGTTGCCGTCTGGTTTTGCGGTTGCTCCTGATGGTGATGAGACGC GTGGGCTGGAGAATGGTGGTGGTGCTAATGGCGGTGATGATGGTGAGGCGCGTGCGGGTGGGTCCCTTCTGACGGTGGCG TTTCAGATACTCGTGAATAGTCTCCCTACGGCCAAGCTGACGGTGGAGTCAGTGGAGACCGTGAACAATCTCATCTCCTG CACGGTTCAGAAGATCAGAGCCGCGCTTTCACTGTGAAAATTGTCTGTCACGTGATCATCACCTCTGAGTCACGTGAACC CTGTGTTTTTTTTGTATTTTTTGTTGTAGAGGAGTGATTGAAAGTTGA
CDS sequence (LotjaGi3g1v0376900.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCTTTGGTGCAATCTCTCAGCCACGCCTGGTGACTACTACTCCCTCTTTGGCAAAACCCATGTTCACCTCTCCTGG ATTGTCTCTGGCACTTGTGAGAGATCTTCAAAGCAATATAGATGGACAAGAAGATGTGAATAGAATGTGTGAGCCAAATG GTTTGAAGAGGAGCAGGGAAGAAGAGCAAAGCAGATCTGGCAGTGATAACATGGATGGTGGTGCTTCCTGTGATGAACAA GATGCTGCCGACAATCCTCCTAATAAGAAGAAGCGTTATCACCGACACACTCCTCAGCAGATTCAAGAGCTTGAAGCGTT GTTCAAGGAGTGTCCTCACCCAGATGAGAAGCAAAGATTAGAACTCAGCAGAAGGCTTTGTTTGGAAACTAGGCAGGTCA AGTTCTGGTTCCAAAATCGGAGGACCCAAATGAAGACTCAATTGGAACGCCATGAGAACACGCTGCTTAGGCAAGAGAAT GATAAGCTGAGAGGTGAGAACATGTCTATTAGGGACGCTATGAGGAACCCAATTTGTTCAAACTGTGGGGGTCCAGCTAT GATTGGTGAGATTTCAATTGAGGAGCAGCATCTTCGGATCGAGAATGCCCGATTGAAGGATGAGCTAGACCGGGTTTGCG CGCTCGCGGGGAAGTTCTTGGGTCGCCCCATTTCGTCATTGCCGAACTCAAGTTTGGAGCTTGGTGTTGGGGGAAACAAT GGTTTTGGTGGGATGAACACAATGCCTGATTTTGGGATGGCTAACTCTTTAGCCATGGTGTCTCCTTCAATAAGACCATC ACCGACTGGGGTTACTTCTGGATTTGTTGATAGATCAATTGAGAGGTCTATGATTGTTGAGCTTGCTTTGGCTGCTATGG ATGAATTGATGAAGATGGCGCAGACCGGTGAGCCTCTCTGGATGAGGAATGTTGAAGTGGGGAGGGAAATTTTGAACCAT GAGGAGTACATGAGGACATTCACTCCTTGCATTGGGATTAGGCCTAATGGTTTTGTCTCTGAGGCTTCTAGGGAGACTGG AATGGTCATCATAAACAGCTTAGCCCTTGTTGAAACTCTCATGGATGCAAATCGATGGGCAGAGATGTTTCCTTGCATGA TTGCCAGAACCGCCACCAACGAAGTTGTATCCAGTGGGATAAATGGAACCAGAAATGGTGCACTTCAACTAATGCATGGT GAACTTCATGTTCTTTCACCTTTGGTTCCGGTTCGCGAGGTCAATTTCCTCCGATTTTGCAAGCAGCACAGAGAAGGTGT GTGGGCTGTGGTGGATCTGTCCATAGATACCATCCGAGAAGGTTCGGGCGTGCCTAGTTTTGGTAACTGCAGGAGGCTTC CTTCTGGTTGTGTGGTGCAAGATATGCCTAATGGTTATTCCAAGGTGACATGGGTGGAGCATGCAGAATACGACGAAAGT CAAGTCCACCAGCTGTACAGACCCTTATTGAGCTCCGGCATGGGGTTTGGAGCACAACGCTGGATCGCCACCTTACAACG CCAGTGCGAGTGCCTCGCCATCCTCATGTCCTCTGCACCACCCTCCATCAGAGACCACTCCGCACCGATTACAGCAGGGG GAAAGCGCAGCATGCTGAAGCTGGCGCAGCGCATGACCAACAACTTCTGCGCCGGGGTGTGCGCCTCCACCGTGCACAAA TGGAACAAGCTGAATCCGGGCAATGTGGAGGAAAACGTGAGGGTGATGACACGGCAGAGCATCGACGATCCCGGTGAGCC ACCGGGGATCGTGCTCAGCGCTGCCACGTCTGTGTGGCTCCCTGTCTCCCCTCACCGGCTCTTCAATTTCCTCCGTGACG AGAGGCTCCGGAGTGAGTGGGACATACTCTCCAACGGTGGTCCCATGCAGGAGATGGCCCACATCGCTAAGGGTCAAGAC CATGGCAACTGCGTCTCTCTTCTACGAGCTAGTGCAATGAATTCGAACCAGAGTAGCATGTTGATACTACAGGAGACATG CACAGACGCGTCGGGGTCGCTTGTGGTGTACGCGCCGGTGGATACTCCGGCCATGCACGTGGTCATGAATGGTGGCGATT CTGCTTATGTGGCGTTGTTGCCGTCTGGTTTTGCGGTTGCTCCTGATGGTGATGAGACGCGTGGGCTGGAGAATGGTGGT GGTGCTAATGGCGGTGATGATGGTGAGGCGCGTGCGGGTGGGTCCCTTCTGACGGTGGCGTTTCAGATACTCGTGAATAG TCTCCCTACGGCCAAGCTGACGGTGGAGTCAGTGGAGACCGTGAACAATCTCATCTCCTGCACGGTTCAGAAGATCAGAG CCGCAGGAGTGATTGAAAGTTGA
Protein sequence (LotjaGi3g1v0376900.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFGAISQPRLVTTTPSLAKPMFTSPGLSLALVRDLQSNIDGQEDVNRMCEPNGLKRSREEEQSRSGSDNMDGGASCDEQ DAADNPPNKKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQEN DKLRGENMSIRDAMRNPICSNCGGPAMIGEISIEEQHLRIENARLKDELDRVCALAGKFLGRPISSLPNSSLELGVGGNN GFGGMNTMPDFGMANSLAMVSPSIRPSPTGVTSGFVDRSIERSMIVELALAAMDELMKMAQTGEPLWMRNVEVGREILNH EEYMRTFTPCIGIRPNGFVSEASRETGMVIINSLALVETLMDANRWAEMFPCMIARTATNEVVSSGINGTRNGALQLMHG ELHVLSPLVPVREVNFLRFCKQHREGVWAVVDLSIDTIREGSGVPSFGNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDES QVHQLYRPLLSSGMGFGAQRWIATLQRQCECLAILMSSAPPSIRDHSAPITAGGKRSMLKLAQRMTNNFCAGVCASTVHK WNKLNPGNVEENVRVMTRQSIDDPGEPPGIVLSAATSVWLPVSPHRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQD HGNCVSLLRASAMNSNQSSMLILQETCTDASGSLVVYAPVDTPAMHVVMNGGDSAYVALLPSGFAVAPDGDETRGLENGG GANGGDDGEARAGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIRAAGVIES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 19 | 19 | - | – | |
| PANTHER | 42 | 779 | 738 | 0.0 | – | |
| PANTHER | 42 | 779 | 738 | 0.0 | ||
| MobiDBLite | 43 | 97 | 55 | - | – | |
| MobiDBLite | 50 | 67 | 18 | - | – | |
| Gene3D | 63 | 146 | 84 | 7.1E-20 | – | |
| SUPERFAMILY | 70 | 147 | 78 | 4.71E-21 | ||
| ProSiteProfiles | 87 | 147 | 61 | 17.362 | ||
| SMART | 88 | 151 | 64 | 4.7E-17 | ||
| Pfam | 90 | 145 | 56 | 1.6E-18 | ||
| CDD | 90 | 147 | 58 | 6.12002E-19 | ||
| ProSitePatterns | 122 | 145 | 24 | - | ||
| Coils | 141 | 161 | 21 | - | – | |
| ProSiteProfiles | 278 | 514 | 237 | 42.319 | ||
| SUPERFAMILY | 280 | 511 | 232 | 2.43E-31 | – | |
| CDD | 282 | 510 | 229 | 2.90569E-124 | – | |
| Pfam | 287 | 511 | 225 | 1.9E-54 | ||
| SMART | 287 | 511 | 225 | 1.7E-45 | ||
| SUPERFAMILY | 541 | 772 | 232 | 6.96E-23 | – | |
| MobiDBLite | 710 | 729 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi3g1v0376900.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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