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IPR017970 is a Homeobox, conserved site.
<p>The homeobox domain or homeodomain was first identified in a number of Drosophila homeotic and segmentation proteins, but is now known to be well-conserved in many other animals, including vertebrates [[cite:PUB00000591], [cite:PUB00005390]]. Hox genes encode homeodomain-containing transcriptional regulators that operate differential genetic programs along the anterior-posterior axis of animal bodies [[cite:PUB00010002]]. The domain binds DNA through a helix-turn-helix (HTH) structure. The HTH motif is characterised by two α-helices, which make intimate contacts with the DNA and are joined by a short turn. The second helix binds to DNA via a number of hydrogen bonds and hydrophobic interactions, which occur between specific side chains and the exposed bases and thymine methyl groups within the major groove of the DNA. The first helix helps to stabilise the structure.</p> <p>The motif is very similar in sequence and structure in a wide range of DNA-binding proteins (e.g., cro and repressor proteins, homeotic proteins, etc.). One of the principal differences between HTH motifs in these different proteins arises from the stereo-chemical requirement for glycine in the turn which is needed to avoid steric interference of the β-carbon with the main chain: for cro and repressor proteins the glycine appears to be mandatory, while for many of the homeotic and other DNA-binding proteins the requirement is relaxed.</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: homeobox-leucine zipper protein ATHB-7-like [Glycine max] gi|356520247|ref|XP_003528775.1| | 18 | ||
– | Homeobox protein knotted-1-like 2-like [Glycine max] gi|388556558|ref|NP_001253999.1| | 24 | ||
– | PREDICTED: homeobox-leucine zipper protein HAT22-like [Glycine max] gi|356541549|ref|XP_003539237.1| | 17 | ||
– | PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Cicer arietinum] gi|502140212|ref|XP_004504111.1| | 18 | ||
– | PREDICTED: homeobox protein knotted-1-like 1-like isoform 1 [Glycine max] gi|356535014|ref|XP_003536044.1| | 24 | ||
– | PREDICTED: homeobox-leucine zipper protein ROC6-like [Cicer arietinum] gi|502175726|ref|XP_004515730.1| | 20 | ||
– | PREDICTED: homeobox-leucine zipper protein HDG2-like isoform X1 [Cicer arietinum] gi|502171637|ref|XP_004515074.1| | 22 | ||
– | PREDICTED: homeobox-leucine zipper protein HAT7-like [Glycine max] gi|356531784|ref|XP_003534456.1| | 17 | ||
– | Homeobox-leucine zipper protein ATHB-22 [Medicago truncatula] gi|357440243|ref|XP_003590399.1| | 18 | ||
– | PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like [Glycine max] gi|356520461|ref|XP_003528880.1| | 20 | ||
– | PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like [Cicer arietinum] gi|502157383|ref|XP_004510857.1| | 20 | ||
– | PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Vitis vinifera] gi|225444363|ref|XP_002266688.1| | 22 | ||
– | Homeobox-leucine zipper protein ATHB-7 [Medicago truncatula] gi|357464079|ref|XP_003602321.1| | 18 | ||
– | PREDICTED: homeobox-leucine zipper protein HOX19-like [Glycine max] gi|356509807|ref|XP_003523637.1| | 16 | ||
– | PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like [Glycine max] gi|356532068|ref|XP_003534596.1| | 20 | ||
– | PREDICTED: homeobox-leucine zipper protein HAT14-like [Glycine max] gi|356530687|ref|XP_003533912.1| | 20 | ||
– | Homeobox-leucine zipper protein ATHB-22 [Medicago truncatula] gi|357440243|ref|XP_003590399.1| | 18 | ||
– | Transcription factor Homeobox [Lotus japonicus] gi|193237555|dbj|BAG50054.1| | 17 | ||
– | PREDICTED: homeobox-leucine zipper protein HAT7-like [Cicer arietinum] gi|502090912|ref|XP_004489381.1| | 18 | ||
– | Homeobox-leucine zipper protein [Medicago truncatula] gi|357486709|ref|XP_003613642.1| | 18 | ||
– | Homeobox-leucine zipper protein [Medicago truncatula] gi|357486709|ref|XP_003613642.1| | 18 | ||
– | Homeodomain leucine zipper protein HDZ2 [Phaseolus vulgaris] gi|15148918|gb|AAK84886.1|AF402605_1 | 18 | ||
– | PREDICTED: homeobox-leucine zipper protein ROC3-like [Glycine max] gi|356529736|ref|XP_003533444.1| | 20 | ||
– | PREDICTED: homeobox-leucine zipper protein HAT22-like [Glycine max] gi|356541549|ref|XP_003539237.1| | 17 | ||
– | Homeobox-leucine zipper protein HOX17 [Medicago truncatula] gi|357482123|ref|XP_003611347.1| | 22 | ||
– | PREDICTED: homeobox protein SBH1-like isoform 1 [Glycine max] gi|356554468|ref|XP_003545568.1| | 23 | ||
– | PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine max] gi|356556218|ref|XP_003546423.1| | 21 | ||
– | PREDICTED: homeobox-leucine zipper protein HAT3-like [Glycine max] gi|356504593|ref|XP_003521080.1| | 19 | ||
– | PREDICTED: homeobox-leucine zipper protein HOX27-like [Glycine max] gi|356557110|ref|XP_003546861.1| | 17 | ||
– | PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max] gi|356542838|ref|XP_003539872.1| | 22 | ||
– | PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max] gi|356550018|ref|XP_003543387.1| | 27 | ||
– | PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Vitis vinifera] gi|225444363|ref|XP_002266688.1| | 22 | ||
– | KNT1 [Glycine max] gi|351734506|ref|NP_001237352.1| | 23 | ||
– | PREDICTED: homeobox-leucine zipper protein HAT4-like [Glycine max] gi|356563350|ref|XP_003549927.1| | 21 | ||
– | PREDICTED: homeobox-leucine zipper protein HAT4-like [Glycine max] gi|356563350|ref|XP_003549927.1| | 21 | ||
– | PREDICTED: homeobox-leucine zipper protein HAT5-like [Glycine max] gi|356562808|ref|XP_003549660.1| | 18 | ||
– | PREDICTED: homeobox-leucine zipper protein HAT14-like [Glycine max] gi|356550712|ref|XP_003543728.1| | 15 | ||
– | PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like [Glycine max] gi|356535894|ref|XP_003536477.1| | 22 | ||
– | PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like [Cicer arietinum] gi|502119362|ref|XP_004496593.1| | 20 | ||
– | Homeobox-leucine zipper-like protein [Medicago truncatula] gi|357462199|ref|XP_003601381.1| | 18 | ||
– | PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Cicer arietinum] gi|502134198|ref|XP_004502034.1| | 18 | ||
– | PREDICTED: homeobox-leucine zipper protein HAT14-like [Glycine max] gi|356556274|ref|XP_003546451.1| | 16 | ||
– | Knox class 1 protein [Pisum sativum] gi|3426304|gb|AAC32262.1| | 23 | ||
– | Homeobox protein knotted-1, putative; TAIR: AT1G62360.1 KNOX/ELK homeobox transcription factor; Swiss-Prot: sp|P46608|HSBH1_SOYBN Homeobox protein SBH1; TrEMBL-Plants: tr|V7B6U2|V7B6U2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0065200 | 23 | ||
– | Homeobox protein knotted-1, putative; TAIR: AT1G62360.1 KNOX/ELK homeobox transcription factor; Swiss-Prot: sp|P46608|HSBH1_SOYBN Homeobox protein SBH1; TrEMBL-Plants: tr|A0A0S3RK69|A0A0S3RK69_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0065200 | 23 | ||
– | Homeobox protein; TAIR: AT1G62360.1 KNOX/ELK homeobox transcription factor; Swiss-Prot: sp|P46608|HSBH1_SOYBN Homeobox protein SBH1; TrEMBL-Plants: tr|K7KB19|K7KB19_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0065200 | 19 | ||
– | Homeobox associated leucine zipper protein; TAIR: AT5G06710.1 homeobox leucine zipper protein; Swiss-Prot: sp|P46665|HAT14_ARATH Homeobox-leucine zipper protein HAT14; TrEMBL-Plants: tr|I1L2K9|I1L2K9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0279600 | 20 | ||
– | Homeobox protein; TAIR: AT2G46680.1 homeobox 7; Swiss-Prot: sp|P46897|ATHB7_ARATH Homeobox-leucine zipper protein ATHB-7; TrEMBL-Plants: tr|A0A0S3RDW7|A0A0S3RDW7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0293900 | 18 | ||
– | Homeobox associated leucine zipper protein; TAIR: AT4G37790.1 Homeobox-leucine zipper protein family; Swiss-Prot: sp|A2XE76|HOX19_ORYSI Homeobox-leucine zipper protein HOX19; TrEMBL-Plants: tr|A0A151TTF7|A0A151TTF7_CAJCA Homeobox-leucine zipper protein HOX19; Found in the gene: LotjaGi1g1v0364700 | 16 | ||
– | Homeobox leucine zipper protein; TAIR: AT4G00730.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein; Swiss-Prot: sp|Q0WV12|ANL2_ARATH Homeobox-leucine zipper protein ANTHOCYANINLESS 2; TrEMBL-Plants: tr|A0A0S3RT53|A0A0S3RT53_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0468000 | 21 | ||
– | Homeobox leucine zipper protein; TAIR: AT4G00730.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein; Swiss-Prot: sp|Q0WV12|ANL2_ARATH Homeobox-leucine zipper protein ANTHOCYANINLESS 2; TrEMBL-Plants: tr|A0A0S3RT53|A0A0S3RT53_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0468000 | 21 | ||
– | Homeobox protein; TAIR: AT3G01220.1 homeobox protein 20; Swiss-Prot: sp|Q8LAT0|ATB20_ARATH Homeobox-leucine zipper protein ATHB-20; TrEMBL-Plants: tr|I1L5Z0|I1L5Z0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0501900 | 17 | ||
– | Homeobox leucine zipper protein; TAIR: AT3G61150.1 homeodomain GLABROUS 1; Swiss-Prot: sp|Q9M2E8|HDG1_ARATH Homeobox-leucine zipper protein HDG1; TrEMBL-Plants: tr|A0A151U6K6|A0A151U6K6_CAJCA Homeobox-leucine zipper protein ANTHOCYANINLESS 2; Found in the gene: LotjaGi2g1v0146700 | 21 | ||
– | Homeobox leucine zipper protein; TAIR: AT1G73360.1 homeodomain GLABROUS 11; Swiss-Prot: sp|Q9FX31|HDG11_ARATH Homeobox-leucine zipper protein HDG11; TrEMBL-Plants: tr|I1L3Y5|I1L3Y5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0184400 | 23 | ||
– | Homeobox leucine zipper protein; TAIR: AT1G73360.1 homeodomain GLABROUS 11; Swiss-Prot: sp|Q9FX31|HDG11_ARATH Homeobox-leucine zipper protein HDG11; TrEMBL-Plants: tr|I1L3Y5|I1L3Y5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0184400 | 23 | ||
– | Homeobox associated leucine zipper protein; TAIR: AT3G01470.1 homeobox 1; Swiss-Prot: sp|Q02283|HAT5_ARATH Homeobox-leucine zipper protein HAT5; TrEMBL-Plants: tr|B3IX27|B3IX27_LOTJA Transcription factor Homeobox; Found in the gene: LotjaGi2g1v0248000 | 17 | ||
– | Homeobox protein; TAIR: AT5G15150.1 homeobox 3; Swiss-Prot: sp|Q00466|HAT7_ARATH Homeobox-leucine zipper protein HAT7; TrEMBL-Plants: tr|I3T0C8|I3T0C8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0257900 | 18 | ||
– | Homeobox protein, putative; TAIR: AT1G69780.1 Homeobox-leucine zipper protein family; Swiss-Prot: sp|Q8LC03|ATB13_ARATH Homeobox-leucine zipper protein ATHB-13; TrEMBL-Plants: tr|I3SIZ2|I3SIZ2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0306600 | 18 | ||
– | Homeobox protein, putative; TAIR: AT1G69780.1 Homeobox-leucine zipper protein family; Swiss-Prot: sp|Q8LC03|ATB13_ARATH Homeobox-leucine zipper protein ATHB-13; TrEMBL-Plants: tr|I3SIZ2|I3SIZ2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0306600 | 18 | ||
– | Homeobox protein, putative; TAIR: AT3G01470.1 homeobox 1; Swiss-Prot: sp|Q02283|HAT5_ARATH Homeobox-leucine zipper protein HAT5; TrEMBL-Plants: tr|A0A0L9VNR3|A0A0L9VNR3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0309100 | 18 | ||
– | Homeobox 1; TAIR: AT1G23380.1 homeobox protein knotted-1-like 6; Swiss-Prot: sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6; TrEMBL-Plants: tr|R9R650|R9R650_9FABA Knotted-1 homeobox protein; Found in the gene: LotjaGi2g1v0322900 | 24 | ||
– | Homeobox 1; TAIR: AT1G23380.1 homeobox protein knotted-1-like 6; Swiss-Prot: sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6; TrEMBL-Plants: tr|G7K060|G7K060_MEDTR Homeobox knotted-like protein; Found in the gene: LotjaGi2g1v0322900 | 24 | ||
– | Homeobox leucine zipper protein; TAIR: AT5G46880.1 homeobox-7; Swiss-Prot: sp|A2ZAI7|ROC3_ORYSI Homeobox-leucine zipper protein ROC3; TrEMBL-Plants: tr|A0A151THF9|A0A151THF9_CAJCA Homeobox-leucine zipper protein ROC3; Found in the gene: LotjaGi2g1v0336500 | 22 | ||
– | Homeobox protein, putative; TAIR: AT4G36740.1 homeobox protein 40; Swiss-Prot: sp|O23208|ATB40_ARATH Homeobox-leucine zipper protein ATHB-40; TrEMBL-Plants: tr|A0A0B2SB91|A0A0B2SB91_GLYSO Homeobox-leucine zipper protein ATHB-40; Found in the gene: LotjaGi2g1v0393100 | 14 | ||
– | Homeobox-leucine zipper protein; TAIR: AT4G37790.1 Homeobox-leucine zipper protein family; Swiss-Prot: sp|P46604|HAT22_ARATH Homeobox-leucine zipper protein HAT22; TrEMBL-Plants: tr|I3SRM0|I3SRM0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0412500 | 17 | ||
– | Homeobox associated leucine zipper protein; TAIR: AT5G47370.1 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein; Swiss-Prot: sp|P46601|HAT2_ARATH Homeobox-leucine zipper protein HAT2; TrEMBL-Plants: tr|B7FJ62|B7FJ62_MEDTR Homeobox associated leucine zipper protein; Found in the gene: LotjaGi2g1v0421000 | 22 | ||
– | Homeobox-leucine zipper family protein; TAIR: AT4G21750.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein; Swiss-Prot: sp|Q8RWU4|ATML1_ARATH Homeobox-leucine zipper protein MERISTEM L1; TrEMBL-Plants: tr|E0CVM0|E0CVM0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0457800 | 23 | ||
– | Homeobox leucine zipper protein; TAIR: AT1G79840.1 HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein; Swiss-Prot: sp|P46607|HGL2_ARATH Homeobox-leucine zipper protein GLABRA 2; TrEMBL-Plants: tr|A0A0L9UPL7|A0A0L9UPL7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0018300 | 24 | ||
– | Homeobox associated leucine zipper protein; TAIR: AT3G60390.1 homeobox-leucine zipper protein 3; Swiss-Prot: sp|P46602|HAT3_ARATH Homeobox-leucine zipper protein HAT3; TrEMBL-Plants: tr|A0A151RB95|A0A151RB95_CAJCA Homeobox-leucine zipper protein HAT3; Found in the gene: LotjaGi3g1v0065200 | 19 | ||
– | Homeobox associated leucine zipper protein; TAIR: AT5G06710.1 homeobox leucine zipper protein; Swiss-Prot: sp|A2YW03|HOX27_ORYSI Homeobox-leucine zipper protein HOX27; TrEMBL-Plants: tr|A0A0S3SJN3|A0A0S3SJN3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0126500 | 17 | ||
– | Homeobox-leucine zipper family protein; TAIR: AT1G05230.1 homeodomain GLABROUS 2; Swiss-Prot: sp|Q94C37|HDG2_ARATH Homeobox-leucine zipper protein HDG2; TrEMBL-Plants: tr|A0A0S3SH64|A0A0S3SH64_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0190300 | 23 | ||
– | Homeobox-leucine zipper family protein; TAIR: AT1G05230.1 homeodomain GLABROUS 2; Swiss-Prot: sp|Q94C37|HDG2_ARATH Homeobox-leucine zipper protein HDG2; TrEMBL-Plants: tr|A0A0S3SH64|A0A0S3SH64_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0190300 | 23 | ||
– | Homeobox-leucine zipper family protein; TAIR: AT1G05230.1 homeodomain GLABROUS 2; Swiss-Prot: sp|Q94C37|HDG2_ARATH Homeobox-leucine zipper protein HDG2; TrEMBL-Plants: tr|A0A0S3SH64|A0A0S3SH64_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0190300 | 23 | ||
– | Homeobox-leucine zipper family protein; TAIR: AT1G05230.1 homeodomain GLABROUS 2; Swiss-Prot: sp|Q94C37|HDG2_ARATH Homeobox-leucine zipper protein HDG2; TrEMBL-Plants: tr|A0A0S3SH64|A0A0S3SH64_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0190300 | 23 | ||
– | Homeobox-leucine zipper family protein; TAIR: AT1G05230.1 homeodomain GLABROUS 2; Swiss-Prot: sp|Q94C37|HDG2_ARATH Homeobox-leucine zipper protein HDG2; TrEMBL-Plants: tr|A0A0S3SH64|A0A0S3SH64_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0190300 | 23 | ||
– | Homeobox-leucine zipper family protein; TAIR: AT1G05230.1 homeodomain GLABROUS 2; Swiss-Prot: sp|Q94C37|HDG2_ARATH Homeobox-leucine zipper protein HDG2; TrEMBL-Plants: tr|A0A0S3SH64|A0A0S3SH64_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0190300 | 23 | ||
– | Homeobox-leucine zipper family protein; TAIR: AT1G05230.1 homeodomain GLABROUS 2; Swiss-Prot: sp|Q94C37|HDG2_ARATH Homeobox-leucine zipper protein HDG2; TrEMBL-Plants: tr|A0A0S3SH64|A0A0S3SH64_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0190300 | 23 | ||
– | Homeobox-leucine zipper family protein; TAIR: AT1G05230.1 homeodomain GLABROUS 2; Swiss-Prot: sp|Q94C37|HDG2_ARATH Homeobox-leucine zipper protein HDG2; TrEMBL-Plants: tr|A0A0S3SH64|A0A0S3SH64_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0190300 | 23 | ||
– | Homeobox-leucine zipper family protein; TAIR: AT1G05230.1 homeodomain GLABROUS 2; Swiss-Prot: sp|Q94C37|HDG2_ARATH Homeobox-leucine zipper protein HDG2; TrEMBL-Plants: tr|A0A0S3SH64|A0A0S3SH64_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0190300 | 23 | ||
– | Homeobox-leucine zipper family protein; TAIR: AT1G05230.1 homeodomain GLABROUS 2; Swiss-Prot: sp|Q94C37|HDG2_ARATH Homeobox-leucine zipper protein HDG2; TrEMBL-Plants: tr|A0A0S3SH64|A0A0S3SH64_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0190300 | 23 | ||
– | Homeobox leucine zipper protein; TAIR: AT4G00730.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein; Swiss-Prot: sp|Q0WV12|ANL2_ARATH Homeobox-leucine zipper protein ANTHOCYANINLESS 2; TrEMBL-Plants: tr|V7ANR5|V7ANR5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0376900 | 21 | ||
– | Homeobox leucine zipper protein; TAIR: AT4G00730.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein; Swiss-Prot: sp|Q0WV12|ANL2_ARATH Homeobox-leucine zipper protein ANTHOCYANINLESS 2; TrEMBL-Plants: tr|V7ANR5|V7ANR5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0376900 | 21 | ||
– | Homeobox leucine zipper protein; TAIR: AT4G00730.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein; Swiss-Prot: sp|Q0WV12|ANL2_ARATH Homeobox-leucine zipper protein ANTHOCYANINLESS 2; TrEMBL-Plants: tr|V7ANR5|V7ANR5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0376900 | 21 | ||
– | Homeobox leucine zipper protein; TAIR: AT4G00730.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein; Swiss-Prot: sp|Q0WV12|ANL2_ARATH Homeobox-leucine zipper protein ANTHOCYANINLESS 2; TrEMBL-Plants: tr|V7ANR5|V7ANR5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0376900 | 21 | ||
– | Homeobox leucine zipper protein; TAIR: AT4G00730.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein; Swiss-Prot: sp|Q0WV12|ANL2_ARATH Homeobox-leucine zipper protein ANTHOCYANINLESS 2; TrEMBL-Plants: tr|V7ANR5|V7ANR5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0376900 | 21 | ||
– | Homeobox leucine zipper protein; TAIR: AT4G00730.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein; Swiss-Prot: sp|Q0WV12|ANL2_ARATH Homeobox-leucine zipper protein ANTHOCYANINLESS 2; TrEMBL-Plants: tr|V7ANR5|V7ANR5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0376900 | 22 | ||
– | Homeobox protein; TAIR: AT2G46680.1 homeobox 7; Swiss-Prot: sp|P46897|ATHB7_ARATH Homeobox-leucine zipper protein ATHB-7; TrEMBL-Plants: tr|A0A0B2PFE5|A0A0B2PFE5_GLYSO Homeobox-leucine zipper protein ATHB-7; Found in the gene: LotjaGi3g1v0400200 | 18 | ||
– | Homeobox-leucine zipper family protein; TAIR: AT1G05230.1 homeodomain GLABROUS 2; Swiss-Prot: sp|Q94C37|HDG2_ARATH Homeobox-leucine zipper protein HDG2; TrEMBL-Plants: tr|A0A0S3SC10|A0A0S3SC10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0464900 | 23 | ||
– | Homeobox-leucine zipper family protein; TAIR: AT1G05230.1 homeodomain GLABROUS 2; Swiss-Prot: sp|Q94C37|HDG2_ARATH Homeobox-leucine zipper protein HDG2; TrEMBL-Plants: tr|A0A0S3SC10|A0A0S3SC10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0464900 | 23 | ||
– | Homeobox leucine zipper protein; TAIR: AT4G04890.1 protodermal factor 2; Swiss-Prot: sp|Q93V99|PDF2_ARATH Homeobox-leucine zipper protein PROTODERMAL FACTOR 2; TrEMBL-Plants: tr|A0A0S3SC10|A0A0S3SC10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0464900 | 23 | ||
– | Homeobox-leucine zipper family protein; TAIR: AT1G05230.1 homeodomain GLABROUS 2; Swiss-Prot: sp|Q94C37|HDG2_ARATH Homeobox-leucine zipper protein HDG2; TrEMBL-Plants: tr|A0A0S3SC10|A0A0S3SC10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0464900 | 23 | ||
– | Homeobox-1; TAIR: AT1G62360.1 KNOX/ELK homeobox transcription factor; Swiss-Prot: sp|P46608|HSBH1_SOYBN Homeobox protein SBH1; TrEMBL-Plants: tr|A0A151SU49|A0A151SU49_CAJCA Homeobox protein SBH1; Found in the gene: LotjaGi4g1v0010900 | 23 | ||
– | Homeobox associated leucine zipper protein; TAIR: AT2G01430.1 homeobox-leucine zipper protein 17; Swiss-Prot: sp|Q9XH38|HOX3_ORYSI Homeobox-leucine zipper protein HOX3; TrEMBL-Plants: tr|A0A0L9VAC1|A0A0L9VAC1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0078300 | 17 | ||
– | Homeobox associated leucine zipper protein; TAIR: AT2G01430.1 homeobox-leucine zipper protein 17; Swiss-Prot: sp|Q9XH38|HOX3_ORYSI Homeobox-leucine zipper protein HOX3; TrEMBL-Plants: tr|I1ND77|I1ND77_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0078300 | 17 | ||
– | Homeobox associated leucine zipper protein; TAIR: AT4G37790.1 Homeobox-leucine zipper protein family; Swiss-Prot: sp|P46604|HAT22_ARATH Homeobox-leucine zipper protein HAT22; TrEMBL-Plants: tr|I3S0E4|I3S0E4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0091100 | 17 | ||
– | Homeobox associated leucine zipper protein; TAIR: AT4G16780.1 homeobox protein 2; Swiss-Prot: sp|Q05466|HAT4_ARATH Homeobox-leucine zipper protein HAT4; TrEMBL-Plants: tr|A0A151SKY7|A0A151SKY7_CAJCA Homeobox-leucine zipper protein HAT4; Found in the gene: LotjaGi4g1v0200100 | 21 | ||
– | Homeobox protein, putative; TAIR: AT3G01470.1 homeobox 1; Swiss-Prot: sp|Q02283|HAT5_ARATH Homeobox-leucine zipper protein HAT5; TrEMBL-Plants: tr|I1JZS9|I1JZS9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0246200 | 18 | ||
– | Homeobox associated leucine zipper protein; TAIR: AT4G37790.1 Homeobox-leucine zipper protein family; Swiss-Prot: sp|P46604|HAT22_ARATH Homeobox-leucine zipper protein HAT22; TrEMBL-Plants: tr|I1LVK0|I1LVK0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0308500 | 15 | ||
– | Homeobox protein, putative; TAIR: AT4G40060.1 homeobox protein 16; Swiss-Prot: sp|Q940J1|ATB16_ARATH Homeobox-leucine zipper protein ATHB-16; TrEMBL-Plants: tr|A0A0B2PBB7|A0A0B2PBB7_GLYSO Homeobox-leucine zipper protein ATHB-16; Found in the gene: LotjaGi4g1v0394200 | 18 | ||
– | Homeobox protein knotted-1-like 1; TAIR: AT4G08150.1 homeobox knotted-like protein; Swiss-Prot: sp|O04135|KNAP2_MALDO Homeobox protein knotted-1-like 2; TrEMBL-Plants: tr|I1M8Y1|I1M8Y1_SOYBN KNOX-like DNA-binding protein; Found in the gene: LotjaGi5g1v0039100 | 24 | ||
– | Homeobox leucine zipper protein; TAIR: AT4G00730.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein; Swiss-Prot: sp|Q0WV12|ANL2_ARATH Homeobox-leucine zipper protein ANTHOCYANINLESS 2; TrEMBL-Plants: tr|A0A151U6K6|A0A151U6K6_CAJCA Homeobox-leucine zipper protein ANTHOCYANINLESS 2; Found in the gene: LotjaGi5g1v0064400 | 22 | ||
– | Homeobox protein, putative; TAIR: AT5G03790.1 homeobox 51; Swiss-Prot: sp|Q9LZR0|ATB51_ARATH Putative homeobox-leucine zipper protein ATHB-51; TrEMBL-Plants: tr|I1LZD7|I1LZD7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0089500 | 18 | ||
– | Homeobox associated leucine zipper protein; TAIR: AT5G06710.1 homeobox leucine zipper protein; Swiss-Prot: sp|A2YW03|HOX27_ORYSI Homeobox-leucine zipper protein HOX27; TrEMBL-Plants: tr|A0A0R0KY17|A0A0R0KY17_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0117200 | 18 | ||
– | Homeobox associated leucine zipper protein; TAIR: AT5G06710.1 homeobox leucine zipper protein; Swiss-Prot: sp|A2YW03|HOX27_ORYSI Homeobox-leucine zipper protein HOX27; TrEMBL-Plants: tr|I1L2K9|I1L2K9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0117200 | 18 | ||
– | Homeobox protein knotted-1-like 1; TAIR: AT1G70510.1 homeobox knotted-like protein; Swiss-Prot: sp|Q9FP29|KNOS1_ORYSJ Homeobox protein knotted-1-like 1; TrEMBL-Plants: tr|I3SV38|I3SV38_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0230100 | 24 | ||
– | Homeobox leucine zipper protein; TAIR: AT3G61150.1 homeodomain GLABROUS 1; Swiss-Prot: sp|Q9M2E8|HDG1_ARATH Homeobox-leucine zipper protein HDG1; TrEMBL-Plants: tr|V7BBY4|V7BBY4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0303500 | 21 | ||
– | Homeobox protein, putative; TAIR: AT5G65310.1 homeobox protein 5; Swiss-Prot: sp|P46667|ATHB5_ARATH Homeobox-leucine zipper protein ATHB-5; TrEMBL-Plants: tr|V7BM41|V7BM41_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0197400 | 18 | ||
– | Homeobox protein, putative; TAIR: AT4G40060.1 homeobox protein 16; Swiss-Prot: sp|Q940J1|ATB16_ARATH Homeobox-leucine zipper protein ATHB-16; TrEMBL-Plants: tr|V7BM41|V7BM41_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0197400 | 18 | ||
– | Homeobox protein, putative; TAIR: AT5G65310.1 homeobox protein 5; Swiss-Prot: sp|P46667|ATHB5_ARATH Homeobox-leucine zipper protein ATHB-5; TrEMBL-Plants: tr|V7BM41|V7BM41_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0197400 | 18 | ||
– | Homeobox-1; TAIR: AT1G62360.1 KNOX/ELK homeobox transcription factor; Swiss-Prot: sp|P46608|HSBH1_SOYBN Homeobox protein SBH1; TrEMBL-Plants: tr|A0A0S3S3Z4|A0A0S3S3Z4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0289900 | 23 | ||
– | Homeobox transcription factor KN4; TAIR: AT1G62360.1 KNOX/ELK homeobox transcription factor; Swiss-Prot: sp|P46608|HSBH1_SOYBN Homeobox protein SBH1; TrEMBL-Plants: tr|A0A151T6Q4|A0A151T6Q4_CAJCA Homeobox protein SBH1; Found in the gene: LotjaGi6g1v0289900 | 17 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
cd00086 | CDD | 1 | 0.90 |