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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0452500 |
| Transcript ID | LotjaGi3g1v0452500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RING/U-box superfamily protein; TAIR: AT2G20650.1 RING/U-box superfamily protein; Swiss-Prot: sp|P36096|TUL1_YEAST Transmembrane E3 ubiquitin-protein ligase 1; TrEMBL-Plants: tr|A0A072UNS6|A0A072UNS6_MEDTR RING/U-box protein; Found in the gene: LotjaGi3g1v0452500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:86592462..86601852) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTGTGTTTGGGGTTTGATATGGTTGAGGTTGAGGCTCAGAGGTTGGAGCTTTTGCTGGTTAAGAGGTGGGAATTGAG GATTTTGTTGAAGGTTGGGTTCGTGTGGTGGGTGTTTCTGTTGTTTGTTAGTCCTGTGGTGGGTCTGAGACCATTGAGGG ACAGAACTAACTCGTGGGGTGATGAGGTTTGTTCATGGACTTGTAGTTAATTTCAGTTCTTACTGTTTAATTTGTTGTGT CTGCTGCTTTGTTTTATTGCATTTTCTTGATTGTGGATGAAGGTTGTAAATTTGAACATGATTATCTTAATCTTTGTAAT GTTTTGACCTTAGTATTGATGGTTTCATGCCCCCTGTTTGATTTTTTTATTAAATAAGCTGTGAGGAGTTGCTTAAAGGG GTAAAGGTGTTTGCATAAAGGGGTAAAGGTGTAAAATGAAATTTTTTGGAATAGACAGAACAATGTGGTTTGCATAAAGG GGTAAAGGCGTTTGCACATAGGTTGAGGAGAGATGGATGTTAAGTTAGTTTGCTTAGAATGTCTAGAAGAGGTACCAATT CAAGTCAACCCTTAATTTCCTTGATGAGGCTAGTGGATTAAGAAATTAGTAGTAGTATATTCGTAGTAGAATTGCATGTC AAAGTGCACTTAGTTATATTTAGAGAGGTTTCTTATTCCCATCTTAACCAAGAGCTATTATACATTTGAATTTATGTTTC ATGTTTAACTCGGAAAGTGCTTGAGGGTTGAGAATTTCCACAAGCCCGCATGACGATTGACCAATTATCACTATCTTAAC ATGCTTATATGTTATCTTTCATGTATGATTCTGAAAGTGCTTGGAATTTCAGACAATTAATGATTTTTTCTTCCAATTTT GTAAGTTGCACACTAGGGTGAAGTATTTGACCCACCTTGGCCCTAACTGTTTGACCCAACTTGGTCCAAACTAATTGTGG GTCGGATTTGTTCCTGTTCTACCAAAAAAAGGATTAATGCAATGTCTCATTTTATAAGCAATATTGGTCAGGGATGGGCC CTGACTAATCTAACCCAATTTTATCCTTTTAGTTAGAGTTTTAAGTTCAACACCCCTCCATTTGTTGTTTTAAGTTTGAC CTGTATTCTGTATATAACTATATATTGTTTATTTTGTTTGACGATTCAATTTCCTTTAGCTTATACCTCTAGTGAACTCG GTTCCATCTTACTTAGGCTCAATCTTAATTAGACCTTAGATCATTGGGTTCCTTAGTTCAGGTTTGGGTTTAAAGAATTG AGCAATCAAACTTTAGGGCTGGATGAGGGACAAACATAACCCTTCCTATGAGCATCCCTAGCCTAGCCGTATTTGCAAAA CTTGTTTGCTGAAATTGCTCAAACATATTGAATCCTCAAATGAAGTTATTGTTTTAGGGCCATTTTATTTTGTTATGTGA TTTAGTTGCAAGACCTTTCACATTCCTCCAACGATTTCATTTGACCATTTTCTGTCATTTGACTTGCCTAAACATTGTGA CATCGCTAAACTTACATTTCAATGTTGGTGGCAACATACATTCATTTACTCATTTTGGCATTTTTTTTTCAGTGGATTTT TGCAGGAAAAGATGAAAGTGACGTAGGTCCATTTTCACAATGGAACATAACCGGAACTTATAGAGGTTGGTATTGTTTAA TTACAGAAGTGTAAATTTATGTTGACGACTTCGACATATGGTTTGGTATGTTATGCAAATGTTCAATGCAACTGGTTGCA TAGTTGGGTGTATTTTTTTATTGCTGAGCATCTGTTTCATGTATGGTTTGATGAATTTCTGAACGAGTGATTGTATGATA GGGTAATAAATTTAATGTGAATGATCACAAAGTTACTGCTATATAATATTATCAATTGAGAATTATTTTTTCTATGGCTA CTTGAATTTTTGAATGATTAATGCTTTTCATCAATCAAAATGTCTTGAGGATAAAATATGTTGCTATGCTTCTTACCTTT GCTTAAGTTATTGAGCATTCTTAAATGATTACCACTGGAAGAGAATATAATGGCAAGGGAGCATCATCCGGGTGGTAGAT TAGGGCTATTTGCTCCCATGAATTAACTATGAACTTATGGCATTTGGTCTAAATACTAATAATGTAATGTTAAGAGAAAT TCTGTGCAATTATCAAAACATGCTTCATTTGTAAATGAGCAAGTCTTATCTTCTAATGAACTTTGTCCACTAATTTATTG TTGATCGACTTTGTAAGTTCGACAGAGTTTGATGATGTATGTTGCTCTCCTTGAGTGCAGGGACTTGGAAGTTTTTAGAT ACCACAAACGGCTCTTCCAGATTTTCAGAAATCAGAAAAATAAATGGAAATTCTGTAATTGAATTAGTCAGTACGCCCAC AAAGATAACTGGTGTACATTATGTGCAGGTGAGAAATATTTAACTGTATAGCTAGTTTTAGAAGGAAGTCAGTTTTCATA TATGATGCAGTTTCTTATTTGTTCTATTAAAATTACCTTAGCTTCTGATGCTCCAAGGTTTTAGCTCAATAGAGTGGTTT ATTTTTATATATTTATATTGACATCCTGAATATTTATTGGAAATATAGCTGAATTCAGTAGTTCTTTTGATTTAGTGAAG TTACATTGAAACTTGCAATCTCGATATACAACGCCTGACTTTGATTGAGCCCCCTCGATGCCAAGAAATTAATGCAGACG ACCCAAGTCTTTAGTCTGAAAGTGCTGAAATAAATTATGTTTTAGAGCCTTGATGAACTATTGATCATCACTTGTAATCA CAAAATGTCATCCATATAAACCACAAAATAAATATATTTATTTGACGATGAGCATCTAAGGAAAACAGAACAGTCTAGCT CACAACTTATCATCCCAAAATACTGGAAAACTTTGCTAAGCTGACCAAACCAAGGTTGAGGTGATTGTTTTTGGCCACGC GAAGATTTACGCAATTTACATAATCAGACTCGACCCTCTTCCCAACCCCTATGACAAAAAATCCTAGGGTTGCTTCATAT CGATCTCCTCCTCTAAGTCTCTATGTAAGAAGGCATTTTCAATATATCTAATCAGAATGTTATCTGAATCTCTGATTATG AGAGAATGATTAACTGACTATCATTGAACTAGCAACTGACTCAACAATTCCATTACTAGCAGCACATGTATCTTAACAAC TTCTAACAGATAATGAAAGCTAAGCAAACTAACTATCTCAAGGGGAGGATACAATACATTATTTACTCTAACCCGGAAAA GGCTTGGTTGTTATTTTTTATTTTTGTTGTAGCGTATGTGTATGCATTTGTCAAACTATAATTTAGGGCCTTTTTTAGAT CATAGAACCAAATACATTACTGTTTGTCACACTGAACTATGATGTCAAATCAATGCACATTTTCACTCAAGTACTTACGT AATTTTTTTTCATGCTTTTTCTTAGGGAGTAATTATATTCCATGATGTGTTTGACAATGAATACAATGTTGGTGGTTCTC AAATCAGAGTAGAAGGTGTATATATATGGCCATTTAGACAACTTCGAATGGTAGCGAACAGGTGAACACCAATTTAGTGT GCAGCACAAGTTTTTACGATTCCTTACTGCATTTAGATACCCTAATGCACTGAGACTATGATAATGGCTTTTTTCCTGGA CTTATCCTTTCAAACATTACATTCTGCAGGTTGATATATGGTAAATAATACGTTTCTTTTCTTTCTAATGCTATACTGTT TATTAGCTTGTGGGGCTTGGAGTTTAAGAATGGAATGGATATACTGATTAGCCCATATATATGTGGCTGTTAGAAAAAAA AATTATATAGGGTAGTTATAGCTGTACAGTATAATGTAAGTATAGTATAACATAGAGCTCCACTGTGTAATATACACAGT TGTCACATGCCTTTCATTTCTCTTACCTCTCAAGTCTCAACATGGTATTTGAGCACCAAGTGATCTAGAGTCATATCCTT ATCGCCCCTATTCTAATAAGAAGTTGAATATCAACACAAGGTTAGCGGCTTGGCATTGTCCAAGCTCAAGCCAGTTCTTG TATGATGGGGCATGTCAAATATAAAACCACTCACACGCTTTCACATGAAAAACTTGAGCTTTAGAGATAGTTGCTTCATG AGAATAAACATAATCTATTTCCAATTGAAGTAGTAATGGTAAGCAATATTTCATGTGCTGAAGAATTTCCTTTGGTTTTC TCCTATTGCAGCGGAAAAGAGGGAGGGTTGAATCAGGATGGAGATTATATATTATCCAATCCGTATCATCTGGTATTGCA TATTTCTTAGGTCTCATTGATTGTACACCTTTTTTTACAGATTATATAGCCTACAATAATCTAAAAAGCAACATATCTTA TTTTAGTGATCAATAAAAAATGTTCAAATTATTCTGTATGATTGAAATTTTATGGAGTTCTTGAATTTCAATAAGGATGC TGCTATCCTTTACATGGGCTCGATTTCATTTTTTGTTGTAAGCTTGTTTGTTGTGAAGAAAGGAACTTCTGATGTTTATC AGAATTACAATCCTAGATGAGTCCATATGAGGAATAAAAAGTAAATCAGCCAAGTGAATATTAACAGCTGACTAATTTCT TCCTAAATTATGGGCTCTTCTTTACATAATTAATACCTATTAATGTTAGTCTTTGCTTTGATGGCTTAATCATACTTTCT GTTTAGTTACTGAATCTGTGAGTCACTATCTGCTATAATACACTTCTACCATGGCATGTGGGATGCTCTCTAATAAGGTT TCACTTTATTTTGGAAATCTAAGGTTTCATTTTATGATGTATATTTATGCTGCTTTAAAGTTAAAAATTAAATCTCACTA TTTTAGAAATTTCCAAATGCTAAGATTCCTTTCGTACCTCCTCTTGGCTCTAAACAATGGGGTGTGGACACGAGTTAGAG GACTTTCCATTATCTGAACAAAACCATATGAGACAAATAACTGGAGGGTTAATCATTATGGATATGTGATTATTAATGAT ATAGTGGTATGGTCTATGTTATTTTTGGGAGTACAATGAGCATTCAAAGTGCTAAATGGCTATGTATGTGCCTTTCTGTA TGCAGCTTGGTGTTTTCTCATCCCAAGTATTCCAAGAATCTTCTCGACATAAGATGTGGAGAAGAAAGCATTGTAATTTA TCTCTCTTACTAGCATACTTTAAAGAGTTTTATTCCTTTTCTTTTAGTTGGTTAGTACTGTAATACTACTAACTTCTTTT TTCCCTTCCCCTTTTCCCCTTGCTGCAGCTCCATTTCATGGCATGGACAAACACTGTAATGTAGAAATTGCTGCACGGGT TTCACGCTTGTCATCTTCAAGACATGGTACATGAGTTCTCTTACCATATGAATACTTTCTGTTGAACATTATGTCACACG TTTTTTCTTCCAACTTTCATTCATATATTAGTAAATTTAGTTATTAATTTATAATGAATCTAGTGATTTTGCCAACCCAA AACTCAAATCCAAGGCTTTAATTCCAATAATTTCTACGTGGTCCTCTGATTCTCCTAACAGCCAAAGAAATACTGATGAT TCTCAAGGTGTTCCTGAAGCATTCTTTTCATTTATATAACAAGTCTTAAGGATGTTGCACTTGTTTTTATATACATGCCA GGCTTGTTAATAGCGCGCTATAGCGGCACAATAGCCTATAACGTAGCGGCCTGGGGGGTTCACCGCTACTCCACTATTCA CCGCTATTTGCACTATTTTCCGCTATAGCGCTTGAAATAGCATTTTTTGGGCTTGCCGCTACACTACGCTATCCGCCATT AACAACCCTGATACATGCTATAACGTACAAATGACTAATTCACAGAGCTTCAATTGGCAGGTGTACAACTAGGCCTTTGT CCACAACCTGTTAGCGAAATTTGGTTCCGATTGCAATTTCCTTATGAGTTGGAAAATGGATATTTTTCACATTATGGCTA CGAATCCTTGAATTTACAATATTTATTAAAAAGGGAATGATATGAATCAATTTCTATCTAACAAAGAGGTGTAGGCTGAA AAGAAAACAATGGAAATTTAGTCTCTGTTAGGGGGGTAATTTAATAGGTAGAGGTGGAGGGAAAACTATAGGCTAAACTT TTAAGAAGGATTTAAATATAAATAATTTATGGTGTCATTTGATCCATGTATCTATCTACACGTATTGGCACATGAATAGT TTTATATTATATCCCTAACATGCAAGAGCCCGTTGGGCTTGAAGTGTGGAGAATTTCAACTTTTTTATTAGAATAGTTGG GGCAACAAGGATCGAAATCTAGACCACTTGGTCAGAGAGGCTCCGATACAATGCTATGAACCAACTTTCCCAAAATAAAG GATCAATGAATAGTTTTATATTATATTTCTAACAATATTTATATCCTATGATTTACCAAGTTGTTATATACTTTCTTATA GAAGGGGAGCATGATTCTTTTCAGCTTGAAGGGTTAATGGAAAGTCCTTCTGTGGATGATGATGTAGATTGCTTCTCACC TTTACAGTTAAATGCAACATCGATTAACATTGAAGTCTACTATAGTAAAGCAGTGAACTATACCTTGATGGTTACTTTTG TATCCTTCAGTCATCAGTATTCTTTCAATTTTAAGACTATTATTGTCCATTACTGTATGAGCTCCTTAACATACTTACCA GGTCTCGTTCTTGCAAGTTCTTCTGTTGATTCGGCAAATGGAGCATAGCAATACCCAATCTGTAAGAAATCGCTTCAGAA TATATTTGAAATTTCACATGTTATAGGATATAATCAATTGAAATAATATAAATGATTCTATATTTGGATGAATATGCTCG ACAATATTCATTTCGTACTTCATAGTAGTTCATAAATATATGAATATAGAGAATGAATATGTTCCATATATACCTTTACA GGGGGCTGCCAAGGTTTCAATAATAATGATTGGTCAGCAAGCTATAGTGGATGCTTATCTTTGCCTTATACATCTTACAG CAGGAATACTAGTTGGTAAAGTTCTCAAAAGTCCAAATAAGCTCCTGGAATTTTTGTATAATCACTTGAGATATCTCTAT AAAAATTCTTTCTTTATTGTCCAAATAATCTCTAGAAACCTTGTAGACTGAGATACTAGTTTCAGAGTGAGATAAAATCA ATGGATTCTTCATTAACTGGTCGAGGAATATTTTTCAGTGCCCTTAATTTTGTTTTTTGTGCCCAGCAGGCTATAACAGT AGTTTATCTAAGCCATATAAATACGCGTTGTTGTAAACATACCCGCATGCACTCAAACATAGATGCATTTCCCATACAAA GGAGATAGCAATCTTCATACTTGGATGCTCGGGTTTAGGGTAATCTAATGTTTCACCAGTAGTTCAATCCCTAAAATCAA ACTTCCTCTTATGCTAATTCTAGAGCACACCGGGATTCTATACCGTACAGGACTACAAATTCTTTAAATATGTGCCATGT TAAGAGCAATTATTTTTATTTGTCTCATAATAGTGCAACATTATAAATTATTTTGCAGTAGGTTATAGGTTCAAACTTCC TGCCCTCATTTTAACCAAAAGAGAAAATTATAAATCAATTGTCGTATATTGTTATCCTTGTTCAGTATATGTGACTTCAG TGGTTGATTATCCTCTTTTTAAGATTGTCAGATGAGTAATTTTTGCTACTTCCTGCCATGCAGAATCCTTGTTTAATGCT TTTGCAACTGCTGCATTTTTCAAGTTTGTGGTTTTCTCAATATTTGAGATGAGATATCTCCTTGCCATCTGGAAGGCAAA TAGGCCTATGACTAATGGTGAAGGTTGGGAGACAATGAGGCGTGAGCTTTCAGTTTTGTACAGCCGTTTCTGTAAGTGCT CATTTAGAATGGAAGTTGCTGCAACTGATTTTGTTAATTGTGATCTTGTCACTGTGAATTTACCATGGAGTTTTTGGTCC CATAGGATGCATGTTCACTTCATGTTATTTCTTTAACTGTTGAACTTTAATAGGCAGTCTACTTCTCATGAGCCTGCCAA CTTATACTTTCTTTAACTATGTTGCTTTTTTCAAAATATTTTGGGGGTAAGTAAAGTTAAATGCTGGCCCTAATGGTCTA TCTATGAATTTCACATATTGTTGATTGTATTTTGCTTTTAGGCCAACATGAACATGTGAGCTTCAAGCACACGTGATAGA ATGACAAATATAGTATAAAAATTATCTACTTCAATTTGGGGTAATCCAGCTTTTAACCAACTGGTGGTTGGTTCAAGTGG TGCATGTTTGATTCCCTATAAGTAAGGTCGGGTTCGAGTCTTGTGTATGGGAAAGCCCCTGCGGGGAGAGCTAGCCTCAC TAGGATGTCCCTGCTCAAACATGATTGTCTCCCATGGAGGATAAATCACACCAAAAGAATTTGGGCTAATCCACCTTTAT ACCTTAGATTCTTGTAATGATCATATCCAAATATTTTCTATTCCATTCTTGTGGTCCAGTATGGCAGATAACTTAGTTTT ATGTTTTTTGTTGCTTCAACGGGTGCAAAGATTTCCTTGTATGAAGAAGTGTGGCTCAGATCTAACCAAGCTGATAAACT TCTCTTGCAGATGGGATCTTGTTGGGAGGCATTCTGCTAATGTATGAATTTCATAATTACATGAGACCTGTTCTTCTTCT CGTGTACTCCTTCTGGATACCTCAAATAATCACCAATGTTGTTCGTGACTCCCGCAAACCATTGCATCCTCATTATATCT TAGGCATAACTGTTACTCGCCTCGCGATCCCATTATATATTTTTGGTTGTCCTAACAACTTCTTGCGCATAGAACCGGAT CAGAGCTGGTGTGCTAGTTTGTCTGTATTTGTTGGACTTCAAGCTATAATTCTCCTTCTTCAGCACTATCTCGGGTCCCG TTGGTTCATTCCTCATCAGGTTGGGCCCAACATTGTCTTTCTCTCTACACTTAATAACCACTTATACTGAGTTGTTTTCA TTCACTCTTTAGATTGCTTCTCAGTGAGTCTAATTTTATCTTCATGAGTTGCAGATCCTACCTGAGAAATACAGCTATTA TAGGAGGTTTGCTCCAGATACAAGCCATGCCACAGACTGTGTTATTTGCATGACAGCCATTGATGTTACGCCGCGGTCAA ATGATTGCATGGTATGTGAATATAACCTTTGTCTTATCAAATTAATCTTAACAATCTTGATTAAGGCTAATACGCCAACT GTTATACAGGTAACACCTTGTGATCACTTTTTCCACTCTGGCTGTTTACAAAGATGGATGGATATAAAGATGGAATGCCC AACTTGCCGGCGCGCGCTTCCACCAGCATGA
CDS sequence (LotjaGi3g1v0452500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGTGTTTGGGGTTTGATATGGTTGAGGTTGAGGCTCAGAGGTTGGAGCTTTTGCTGGTTAAGAGGTGGGAATTGAG GATTTTGTTGAAGGTTGGGTTCGTGTGGTGGGTGTTTCTGTTGTTTGTTAGTCCTGTGGTGGGTCTGAGACCATTGAGGG ACAGAACTAACTCGTGGGGTGATGAGTGGATTTTTGCAGGAAAAGATGAAAGTGACGTAGGTCCATTTTCACAATGGAAC ATAACCGGAACTTATAGAGGGACTTGGAAGTTTTTAGATACCACAAACGGCTCTTCCAGATTTTCAGAAATCAGAAAAAT AAATGGAAATTCTGTAATTGAATTAGTCAGTACGCCCACAAAGATAACTGGTGTACATTATGTGCAGGGAGTAATTATAT TCCATGATGTGTTTGACAATGAATACAATGTTGGTGGTTCTCAAATCAGAGTAGAAGGTGTATATATATGGCCATTTAGA CAACTTCGAATGGTAGCGAACAGCGGAAAAGAGGGAGGGTTGAATCAGGATGGAGATTATATATTATCCAATCCGTATCA TCTGCTTGGTGTTTTCTCATCCCAAGTATTCCAAGAATCTTCTCGACATAAGATGTGGAGAAGAAAGCATTCTCCATTTC ATGGCATGGACAAACACTGTAATGTAGAAATTGCTGCACGGGTTTCACGCTTGTCATCTTCAAGACATGAAGGGGAGCAT GATTCTTTTCAGCTTGAAGGGTTAATGGAAAGTCCTTCTGTGGATGATGATGTAGATTGCTTCTCACCTTTACAGTTAAA TGCAACATCGATTAACATTGAAGTCTACTATAGTAAAGCAGTGAACTATACCTTGATGGTTACTTTTGTCTCGTTCTTGC AAGTTCTTCTGTTGATTCGGCAAATGGAGCATAGCAATACCCAATCTGGGGCTGCCAAGGTTTCAATAATAATGATTGGT CAGCAAGCTATAGTGGATGCTTATCTTTGCCTTATACATCTTACAGCAGGAATACTAGTTGAATCCTTGTTTAATGCTTT TGCAACTGCTGCATTTTTCAAGTTTGTGGTTTTCTCAATATTTGAGATGAGATATCTCCTTGCCATCTGGAAGGCAAATA GGCCTATGACTAATGGTGAAGGTTGGGAGACAATGAGGCGTGAGCTTTCAGTTTTGTACAGCCGTTTCTATGGGATCTTG TTGGGAGGCATTCTGCTAATGTATGAATTTCATAATTACATGAGACCTGTTCTTCTTCTCGTGTACTCCTTCTGGATACC TCAAATAATCACCAATGTTGTTCGTGACTCCCGCAAACCATTGCATCCTCATTATATCTTAGGCATAACTGTTACTCGCC TCGCGATCCCATTATATATTTTTGGTTGTCCTAACAACTTCTTGCGCATAGAACCGGATCAGAGCTGGTGTGCTAGTTTG TCTGTATTTGTTGGACTTCAAGCTATAATTCTCCTTCTTCAGCACTATCTCGGGTCCCGTTGGTTCATTCCTCATCAGAT CCTACCTGAGAAATACAGCTATTATAGGAGGTTTGCTCCAGATACAAGCCATGCCACAGACTGTGTTATTTGCATGACAG CCATTGATGTTACGCCGCGGTCAAATGATTGCATGGTAACACCTTGTGATCACTTTTTCCACTCTGGCTGTTTACAAAGA TGGATGGATATAAAGATGGAATGCCCAACTTGCCGGCGCGCGCTTCCACCAGCATGA
Protein sequence (LotjaGi3g1v0452500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVCLGFDMVEVEAQRLELLLVKRWELRILLKVGFVWWVFLLFVSPVVGLRPLRDRTNSWGDEWIFAGKDESDVGPFSQWN ITGTYRGTWKFLDTTNGSSRFSEIRKINGNSVIELVSTPTKITGVHYVQGVIIFHDVFDNEYNVGGSQIRVEGVYIWPFR QLRMVANSGKEGGLNQDGDYILSNPYHLLGVFSSQVFQESSRHKMWRRKHSPFHGMDKHCNVEIAARVSRLSSSRHEGEH DSFQLEGLMESPSVDDDVDCFSPLQLNATSINIEVYYSKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSIIMIG QQAIVDAYLCLIHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKANRPMTNGEGWETMRRELSVLYSRFYGIL LGGILLMYEFHNYMRPVLLLVYSFWIPQIITNVVRDSRKPLHPHYILGITVTRLAIPLYIFGCPNNFLRIEPDQSWCASL SVFVGLQAIILLLQHYLGSRWFIPHQILPEKYSYYRRFAPDTSHATDCVICMTAIDVTPRSNDCMVTPCDHFFHSGCLQR WMDIKMECPTCRRALPPA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | - | – | |
| Phobius | 28 | 48 | 21 | - | – | |
| TMHMM | 32 | 49 | 18 | - | – | |
| Phobius | 49 | 279 | 231 | - | – | |
| PANTHER | 52 | 578 | 527 | 0.0 | – | |
| PANTHER | 52 | 578 | 527 | 0.0 | – | |
| Phobius | 280 | 299 | 20 | - | – | |
| TMHMM | 280 | 299 | 20 | - | – | |
| Phobius | 300 | 310 | 11 | - | – | |
| Phobius | 311 | 340 | 30 | - | – | |
| Phobius | 341 | 345 | 5 | - | – | |
| TMHMM | 346 | 368 | 23 | - | – | |
| Phobius | 346 | 368 | 23 | - | – | |
| Phobius | 369 | 388 | 20 | - | – | |
| TMHMM | 389 | 411 | 23 | - | – | |
| Phobius | 389 | 408 | 20 | - | – | |
| Phobius | 409 | 413 | 5 | - | – | |
| Phobius | 414 | 433 | 20 | - | – | |
| Phobius | 434 | 444 | 11 | - | – | |
| TMHMM | 441 | 463 | 23 | - | – | |
| Phobius | 445 | 462 | 18 | - | – | |
| Phobius | 463 | 473 | 11 | - | – | |
| Phobius | 474 | 493 | 20 | - | – | |
| TMHMM | 476 | 498 | 23 | - | – | |
| Phobius | 494 | 578 | 85 | - | – | |
| Gene3D | 511 | 576 | 66 | 3.2E-14 | ||
| SUPERFAMILY | 527 | 576 | 50 | 1.19E-14 | – | |
| Pfam | 527 | 572 | 46 | 1.7E-9 | ||
| SMART | 527 | 572 | 46 | 0.0024 | ||
| ProSiteProfiles | 528 | 572 | 45 | 12.194 | ||
| SMART | 528 | 571 | 44 | 1.3E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi3g1v0452500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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