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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • PF13639
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We have found 475 results. Now displaying 1 of 10 with 50 rows per page. This search has taken 0.083s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. PHD and RING finger domain-containing protein [Medicago truncatula] gi|357511785|ref|XP_003626181.1| chr0 20004399 20008108 -
n.a. PREDICTED: RING-H2 finger protein ATL46-like [Glycine max] gi|356526834|ref|XP_003532021.1| chr0 25793274 25794924 +
n.a. PREDICTED: RING-H2 finger protein ATL46-like [Glycine max] gi|356526834|ref|XP_003532021.1| chr0 25793274 25794924 +
n.a. RING finger protein [Medicago truncatula] gi|357521767|ref|XP_003607649.1| chr0 28819135 28821066 -
n.a. RING finger protein [Medicago truncatula] gi|357521767|ref|XP_003607649.1| chr0 28819135 28821066 -
n.a. PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 1 [Solanum lycopersicum] gi|460364892|ref|XP_004228343.1| chr0 31922225 31922843 +
n.a. PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus] gi|449441410|ref|XP_004138475.1| chr0 32829041 32836121 +
n.a. PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus] gi|449441410|ref|XP_004138475.1| chr0 32829041 32836121 +
n.a. PREDICTED: RING-H2 finger protein ATL73-like [Cicer arietinum] gi|502141813|ref|XP_004504651.1| chr0 32852281 32853311 -
n.a. RING/U-box superfamily protein [Theobroma cacao] gi|508787285|gb|EOY34541.1| chr0 41718547 41719183 -
n.a. PREDICTED: E3 ubiquitin-protein ligase ATL4-like isoform X1 [Cicer arietinum] gi|502134404|ref|XP_004502107.1| chr0 42864169 42866036 -
n.a. RING finger family protein [Medicago truncatula] gi|357470167|ref|XP_003605368.1| chr0 45532593 45536253 -
n.a. PREDICTED: RING-H2 finger protein ATL54-like [Glycine max] gi|356551725|ref|XP_003544224.1| chr0 46121629 46123407 -
n.a. RING-H2 finger protein ATL5F [Medicago truncatula] gi|357517389|ref|XP_003628983.1| chr0 48177433 48177972 +
n.a. PREDICTED: cell wall protein AWA1-like isoform X1 [Cicer arietinum] gi|502132152|ref|XP_004501243.1| chr0 58421215 58425490 -
n.a. PREDICTED: cell wall protein AWA1-like isoform X1 [Cicer arietinum] gi|502132152|ref|XP_004501243.1| chr0 58421215 58425490 -
n.a. PREDICTED: RING-H2 finger protein ATL67-like [Cicer arietinum] gi|502105458|ref|XP_004492810.1| chr0 60866808 60870154 -
n.a. Zinc finger protein-related isoform 1 [Theobroma cacao] gi|508708206|gb|EOY00103.1| chr0 76414002 76423289 +
n.a. Zinc finger protein-related isoform 1 [Theobroma cacao] gi|508708206|gb|EOY00103.1| chr0 76414002 76424433 +
n.a. PREDICTED: RING-H2 finger protein ATL63-like [Cicer arietinum] gi|502129815|ref|XP_004500434.1| chr0 78574931 78577138 -
n.a. PREDICTED: RING-H2 finger protein ATL63-like [Cicer arietinum] gi|502129815|ref|XP_004500434.1| chr0 78574931 78577138 -
n.a. PREDICTED: RING-H2 finger protein ATL80-like [Cicer arietinum] gi|502153789|ref|XP_004509462.1| chr0 81506648 81508860 -
n.a. PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Cicer arietinum] gi|502151848|ref|XP_004508643.1| chr0 82287617 82289684 -
n.a. Zinc finger protein [Medicago truncatula] gi|357437777|ref|XP_003589164.1| chr0 83777629 83783971 -
n.a. n.a. chr0 96769305 96773579 -
n.a. RING-H2 finger protein [Medicago truncatula] gi|357463243|ref|XP_003601903.1| chr0 98783642 98784283 -
n.a. RING finger protein [Medicago truncatula] gi|357521767|ref|XP_003607649.1| chr0 107336419 107336908 -
n.a. PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max] gi|356559837|ref|XP_003548203.1| chr0 109915114 109916223 -
n.a. PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase KEG-like [Cicer arietinum] gi|502124821|ref|XP_004498687.1| chr0 110741548 110742288 -
n.a. PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Glycine max] gi|356552703|ref|XP_003544702.1| chr0 121971693 121972559 +
n.a. Ring finger protein [Medicago truncatula] gi|357484247|ref|XP_003612411.1| chr0 122439842 122441108 -
n.a. PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cicer arietinum] gi|502081845|ref|XP_004486987.1| chr0 127058526 127059838 -
n.a. RING/U-box superfamily protein isoform 2 [Theobroma cacao] gi|508785653|gb|EOY32909.1| chr0 129752917 129757127 +
n.a. Os08g0414200 [Oryza sativa Japonica Group] gi|115476410|ref|NP_001061801.1| chr0 131128730 131134633 +
n.a. PREDICTED: RING finger protein 44-like [Cicer arietinum] gi|502090001|ref|XP_004489089.1| chr0 132567149 132570541 +
n.a. PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max] gi|356500343|ref|XP_003518992.1| chr0 134085035 134089224 -
n.a. RING finger protein [Medicago truncatula] gi|357463511|ref|XP_003602037.1| chr0 134787632 134788602 -
n.a. transcription factor C3H [Lotus japonicus] gi|193237583|dbj|BAG50068.1| chr0 143100414 143102940 +
n.a. PREDICTED: RING-H2 finger protein ATL52-like [Glycine max] gi|356517696|ref|XP_003527522.1| chr0 146067678 146069636 -
n.a. PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Cicer arietinum] gi|502148788|ref|XP_004507269.1| chr0 146401849 146403842 -
n.a. Inter-alpha-trypsin inhibitor heavy chain H3 [Medicago truncatula] gi|357443207|ref|XP_003591881.1| chr0 150062779 150066991 +
n.a. PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine max] gi|356496378|ref|XP_003517045.1| chr0 151230178 151231913 +
n.a. PREDICTED: RING-H2 finger protein ATL52-like [Cicer arietinum] gi|502156484|ref|XP_004510497.1| chr0 158558609 158559040 +
n.a. PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Fragaria vesca subsp]. vesca] gi|470106246|ref|XP_004289484.1| chr0 164176931 164178493 +
n.a. PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max] gi|356521151|ref|XP_003529221.1| chr0 164272484 164279828 -
n.a. PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Glycine max] gi|356545285|ref|XP_003541074.1| chr0 168480907 168486891 -
n.a. zinc finger protein 1 [Glycine max] gi|83853816|gb|ABC47849.1| chr0 170742354 170748662 -
n.a. PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cicer arietinum] gi|502157412|ref|XP_004510868.1| chr0 177302335 177306221 -
n.a. PREDICTED: RING-H2 finger protein ATL18-like [Cicer arietinum] gi|502121374|ref|XP_004497292.1| chr0 178314429 178315141 -
n.a. RING finger protein [Medicago truncatula] gi|357463141|ref|XP_003601852.1| chr0 182996624 182998702 +