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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0016600 |
| Transcript ID | LotjaGi4g1v0016600.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptide transporter; TAIR: AT2G02040.1 peptide transporter 2; Swiss-Prot: sp|P46032|PTR2_ARATH Protein NRT1/ PTR FAMILY 8.3; TrEMBL-Plants: tr|A0A1J7HNZ3|A0A1J7HNZ3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0016600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:2132928..2138428) extracted from Lotus japonicus Gifu genome v1.2.
GAAGGAAGTGTCTGTTGTTGGTTGGAAGTACTTTTCTCGATAATAATAGTTGTTCTGTCCGCACTACAAGATATTTGAAT ATTTCTTATTCGTTAACTTTCTCCATCCTCCACAAATTGCAACACTTTTTCTAAGTTCTAACTCTCACTCTCACTCTCAC TCATAGTCATTCATATACACATCAAATCAGAATTGAAGGAAGCAGAGAAAGAAGGAGCAGCTAGCTAGAGGCAACAAGAA GATCAATGGGTTCTTCTGATAACGAGCTTCTGCTTCAGGAACAGCGTCTTCTTCATCAGGTGCGTGCTCCTTCCTCAACC TCTATTAAATTTCTCCATAAACGTGTTATCTTCTTTTCTTAGCTAAAAAAAATCAATCACCTTCTGATGTTGATGACTTA CTCAAGTTTTAATTTAGTTTTCGCTCCTAGTTCAGCTAAAAAGTAATGTTACTTGATTTGGATCAGAATAATATATCACT TACTACTCAAGTTTTTCCCATTGTTGTTGAGGCTGTGAATTAACAGAGGGGAGTGGGGGACAAGGTAAACCAGTCATCAT GATGATAAGGAATAAATGGAAATTATATTAATAAATGAGGGATGAAAACTGAGATATTTTTATTTGGGTGAGCATAAGGT TCACAATAATGACTAATTGCATTAAGCAGTAAACGGCGGACTATAAAAGAAGATATTTTATAAATAAAAAATTTAATAGC ACTAAAAATACATTTAACCCTAAACATTTGTGTTGTTGATAAGTCTCACATTTATTAGATATTTGACCAAGATAGTACTT CAGAAAACAATTTACAAGCTAGTTTTTTGGTAAAGTTAGTACCGGCTCAAATTCTAAGATGGTATCAAAGTATATCATAG TTTATTGGAGACCACCCATATATGAGTCATAGACAGATGTTCATTCATGCAAATCTCAGGCTCTAGCATTGACTAGAGAT ATGACCAAGATATAGTAGAACAATCCTCACCTTTTGGTGTATAGCTAGGTCTCTCAAATTCTAAGATGTGTGAATCAAAT GAGATGACTAGCTAAAATAATCTTTTCATTAGAGTTTTGAATTACTTGCTTTATGCAAATTATGAGCAAAGGTGGGTTAA TGCGGTCGCAATTGTGGTTGCTATGCTGTTACAAGGACTCGAAAACCCCTTAACGTTGCAGCTGCAATTACGATTGCCGA GGGCACTGCTTGTCTTATGGAATCTCCACTCTCCCTTCCCTTTTTCATTATTATTCTTTCCAATAACTTTGCATGAATTC TTTTCTCAAACAATTGGATTCCATTTGGTAAATGGGGGTAAAGAGAATATTGCACCCACAAGTAGTAGTGGAATTGATTT CCTTCTACTATTACCGGCTTGTAATTTGTAAATGTCAAACGAATCTAATTCAAATCGTTTTCATGCCCATCTATCAGAAT TTTCCAACTAGCTTCAAATATTCCACAACACATTGTGGTTTATCATGTTTGACAATTATATAACCTTCTTATTTTAAAGA TATAACTGTGTATTATAATGCATTTCAATTAGTTCAAAACTTACATAATTACTTCATAGACTTATTTGACCACAATAGAA ATGATTGGTAAGTGGTCATCTTAATAAATATTAAAGTCTATTGGCCTTTCATTTTGTTCTTGTTTCTAAAAGTCTATAAA AGGAGAACATGTACTGGTTTTGTACATCAGATTGAATTGAGGAGAAACATAATAGCTCTTCCACTCTCTCAGCAGGGTGT GTATGTGAGATAAGTTTTCAATGTCAACTAGACACGACCATGTAAGATATTAACTCAAATAATCTTGTAGACAGTGTGAC AAAATTTGTACAATTCAGCTCCAGTGGTTACTTTCCACCGCTTCTCTTTATTTTCCTCCTCTACAGATTTATTTTCAATT TTTCATTCACTTCAGTTATCTTGGTTTCTTTGCTACTTTTAGCATGTTTGTATCAGCTTATTTTCTCTCAGAATCAATCA TGGCTCTCCCCATGATTGATTTAGCCTTTAGAATCAGCTGTAGAAGGATTTCCACCCATGTTATTCACCAACTTCAATTT TTTATTATGTTACTTTAATTTTTGTTTTTTGCAGCCTGATGATAATCCTCACCCAGGAGATGGGTCAGTTAACATCAAGG GAGAGCTTGCTGTCAAGAGGGAATCTGGGACGTGGAAAGCATGCCCCTTTATTCTAGGTGATCTCCTCCTGCTATCTATG TTGCTGTCTGGGGATGCATCCAACAGTGTATTTTGAGTTTTGACATATTTTTATCTGATACAGGCAGTTTCTTTTGTGAG CGTTTGGCGTATTACGGCATTGCCACTAATCTTGTTATTTATCTCACCACAAAACTAAATGAAGGGACTGTCTCAGCTGC AAAAAATGTTAACACATTTCACGGAACATGCTATCTTACACCTCTCATCGGATCCTTCTTAGCTGATGCTTATTGGGGAA GATATTGGACCATTACCGTGTTCTACGCAGTCTATCTCATTGTAAGCTCAATTCTAACTATGATCTCTGATTTTCTTTCA TTCATGTTGAAATGGAGTTGGTAGGCGGTAGCATATGGTTGCACTTTACTCGCAAAGTTTTAGCTGCTACTCATGATCCT GAAATTTTTCTTCTTCTACATTTGTTGTGCCTTTGATATCTAAAACTCTGCCTACTAAAGTTTTCTTTGCTAGCCTCTAG ACATGAGTTGATAATGGTTTATTCACCTGAAATGGATCAAGTTGAGGTCAAATTTCCCATACTTTGTTTGAAAAACCTTG TTTAAGTTCTGGAACTCAGTCTACCACTTGTTATGTGCATCAATTTTTTATTTGTGATATTGTATTTTTAGCTGATAATT AGTTTGAACAGGGAATGTGCATATTGATTCTTTCAGCAACCATTCCTGCATTGAAGCCAGCGGAATGTGTGAATTCTGTC TGCACAGCAACTTTAGCTCAAAGTGTTGTATTCTTCTTAGGACTGTATTCTATTGCACTAGGGACTGGTGGGATCAAGCC ATGTATTTGGCCCATTGGAGCAGATCAGTTCGATGATACAGATAATAAGGAAAGAGCAAGTAAAGGATCCTTCTTTAATT GGAATTATTTCACTAGTAACATTGGTGCACTTATAGGAGTCAGTGCATTGGTTTGGATTGAAGAAAATATTGGATGGGGC CTCGGATACGGCATTGCTACATCGTCTATCGGTATCGGAATGATAGTTTTCTTTCTCGGTACACCCTTATATAGACTTCA AAAGCCAGGGGGCAGTCCTCTTACAAGAATATGCCAAGTGGTTGCTGCGGCTTTACGTAAGTGGAAACTGGAGGTTCCCC AGGACAGTTTTCTCCTCTTTGAGGTAGCGGAGACGAATTCCTCCATTAAAGGAAGTCCTAAACTAGAGCATAGCGATGGA TTGAGGTATCTCAAGCCTTCAAACATCTATTCATAATAAGTTACACTGTCCTTGTGTTTCTAATGCTCAATATATAGATA GTGATAGTATTGTTGCTTAATATGTTTCCCAAAATATATGTCAAGTGACAAACTCCTCTGCCATTTTAAAATGTAGAGGA ACTATTCATGGTATTCCTATTTGAGGTGAATCTAGAAATGAATCAGAAATTTGCTTTAAAGGGAAAATGACAGGGAAAGA GGAAAAGAAATGGTGCTTCATGAAGTTGCAACTTGCAAACCTTCAAGGTTTTGGAATCCTCTGATTCTTTATTTTGCTGA GGACAAAGACCTAGGCAACCAGCACAAAGTCAATTTGAATTTATTGAGTCTCTTAGAATTCGGGTTCTGCCAAACTCTAC CCCAAAAGCTAGGTTGGAGGTGATGGTTGCTCTACTATTTATAAACACTTATATGGCCATATCTCTAGTCAATGTGGGAG TTTGAGCACACTCCCTCACGTCCAGGGGCTAAATATCTGGAGCATGAAATATCCAAGAATGAACATCAGCGGGTGTCCTA TTTGTAGGTGATCCACTTAATGGATCTAGAATAGACTCCGATATCATCTTAGAATTAGGGTTGGGCCTAACTCTATCCCA AAATCCAGATTAGAGGGGAGGGTTATTCTACCCTTTATAAACACTTATTTGGCCATATATCTAGTCTAGCCCATGTGAGA CTTCTCAACAGAGTCAAACAAGTTTTTATTAGAAATTACAGAGTTAAAAGTTCATTCCCCATTCCTACTTAAATCCGTAG CATTTGATGGAAATAAAAATATGCTTATCAATTAAATTTTCTAATTTGGCAAAAGAACAACTTTGAGGGTTTTCATTGGT CTTGTTCCATTAATTTCTACAATCTTATATTTCTTCCGGTATAATAATTATCCTTGCTGGTGTTCTAGATTCAGTATGTT GTAGGAAAAAATGTAAATTCAATTCTCTACAGTAATAGAATTATGTTAAAAAGTATTAGCCTTTACTTTTGTCCAGGTTC CTAGATAAAGCAGCAGTGCTATCAGATGCAGAGAAAGAGGGTGCCTCCCAAGTATCCAATCCATGGAGACTTTGCACGGT AACACAGGTGGAAGAGTTGAAGATTTTGATCCGCTTGTTTCCAATCTGGGCAACAGGAATCATCTTCTGTGCTGTTTATG CTCAAATGTCGTCATTGTTTGTCGCGCAAGGGAAGAGGATGGACAAAAATCTTGGTTCTTTCAAAATTCCTGCAGCCTCT CTTTCAACTTTTGCATTAATTGGTGTCATTATTTGGGTTCCCATTTATGATAGGGGGATTGTTCCAATTGCCAAGAAATT CACTGGCAATGTAAAGGGCTTCTCAGACTTGCAAAGGATGGGAATTGGCCTGTTTCTCTCCATTGTTTGCATGTCAGCTG CTGCTATATTAGAGAGCAAGAGATTACAAATTGCAAAAGAGTTTGGATTGGTTCATAAAAATGTTCCTGTACCACTAAGT ATATTATGGCAGATACCTCAATATTTCTTGCTTGGTGCTGCACAGGTATTCACCTTTGTTGGGCAGCATGAATTTTTCTA TGAGCAAGCACCAACCTCCATGCGTAGTTTCTGCAGCGCATTGGCACTTCTAACAAATTCACTGGGGAATTACCTGAGCA CTTTGATTCTTATTATTGTTGCTTTCCTCACAACAGAAGATGGAAGTTCTGGATGGATAACAGATAATTTGAATGAGGGT CATCTTGACTACTTCTTTTGGCTGCTAGCTGGACTCAGTTTCTTAAACATGTTGGTGTACATTGTCTGTGCTAGACGGTA CAAAACACAAAAGAAGGTTTATCACATGAGTATTTCTTAAAGACACTATAAGTGACTCGAAGCATCATATCCATAGTTAG CACCTTCATCATTGTTAGAAGCTCCACCTTTGTATCAATGTCTGTTGATACTTGATATCATTATAATCATCAATTCTCAC TATTGTCACTATCTTCAATGTTGTTACTATCATTGTGTTGATACTAAAATATAAAAATGAC
CDS sequence (LotjaGi4g1v0016600.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTATTCACCAACTTCAATTTTTTATTATGTTACTTTAATTTTTGTTTTTTGCAGCCTGATGATAATCCTCACCCAGG AGATGGGTCAGTTAACATCAAGGGAGAGCTTGCTGTCAAGAGGGAATCTGGGACGTGGAAAGCATGCCCCTTTATTCTAG GCAGTTTCTTTTGTGAGCGTTTGGCGTATTACGGCATTGCCACTAATCTTGTTATTTATCTCACCACAAAACTAAATGAA GGGACTGTCTCAGCTGCAAAAAATGTTAACACATTTCACGGAACATGCTATCTTACACCTCTCATCGGATCCTTCTTAGC TGATGCTTATTGGGGAAGATATTGGACCATTACCGTGTTCTACGCAGTCTATCTCATTGGAATGTGCATATTGATTCTTT CAGCAACCATTCCTGCATTGAAGCCAGCGGAATGTGTGAATTCTGTCTGCACAGCAACTTTAGCTCAAAGTGTTGTATTC TTCTTAGGACTGTATTCTATTGCACTAGGGACTGGTGGGATCAAGCCATGTATTTGGCCCATTGGAGCAGATCAGTTCGA TGATACAGATAATAAGGAAAGAGCAAGTAAAGGATCCTTCTTTAATTGGAATTATTTCACTAGTAACATTGGTGCACTTA TAGGAGTCAGTGCATTGGTTTGGATTGAAGAAAATATTGGATGGGGCCTCGGATACGGCATTGCTACATCGTCTATCGGT ATCGGAATGATAGTTTTCTTTCTCGGTACACCCTTATATAGACTTCAAAAGCCAGGGGGCAGTCCTCTTACAAGAATATG CCAAGTGGTTGCTGCGGCTTTACGTAAGTGGAAACTGGAGGTTCCCCAGGACAGTTTTCTCCTCTTTGAGGTAGCGGAGA CGAATTCCTCCATTAAAGGAAGTCCTAAACTAGAGCATAGCGATGGATTGAGGTTCCTAGATAAAGCAGCAGTGCTATCA GATGCAGAGAAAGAGGGTGCCTCCCAAGTATCCAATCCATGGAGACTTTGCACGGTAACACAGGTGGAAGAGTTGAAGAT TTTGATCCGCTTGTTTCCAATCTGGGCAACAGGAATCATCTTCTGTGCTGTTTATGCTCAAATGTCGTCATTGTTTGTCG CGCAAGGGAAGAGGATGGACAAAAATCTTGGTTCTTTCAAAATTCCTGCAGCCTCTCTTTCAACTTTTGCATTAATTGGT GTCATTATTTGGGTTCCCATTTATGATAGGGGGATTGTTCCAATTGCCAAGAAATTCACTGGCAATGTAAAGGGCTTCTC AGACTTGCAAAGGATGGGAATTGGCCTGTTTCTCTCCATTGTTTGCATGTCAGCTGCTGCTATATTAGAGAGCAAGAGAT TACAAATTGCAAAAGAGTTTGGATTGGTTCATAAAAATGTTCCTGTACCACTAAGTATATTATGGCAGATACCTCAATAT TTCTTGCTTGGTGCTGCACAGGTATTCACCTTTGTTGGGCAGCATGAATTTTTCTATGAGCAAGCACCAACCTCCATGCG TAGTTTCTGCAGCGCATTGGCACTTCTAACAAATTCACTGGGGAATTACCTGAGCACTTTGATTCTTATTATTGTTGCTT TCCTCACAACAGAAGATGGAAGTTCTGGATGGATAACAGATAATTTGAATGAGGGTCATCTTGACTACTTCTTTTGGCTG CTAGCTGGACTCAGTTTCTTAAACATGTTGGTGTACATTGTCTGTGCTAGACGGTACAAAACACAAAAGAAGGTTTATCA CATGAGTATTTCTTAA
Protein sequence (LotjaGi4g1v0016600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLFTNFNFLLCYFNFCFLQPDDNPHPGDGSVNIKGELAVKRESGTWKACPFILGSFFCERLAYYGIATNLVIYLTTKLNE GTVSAAKNVNTFHGTCYLTPLIGSFLADAYWGRYWTITVFYAVYLIGMCILILSATIPALKPAECVNSVCTATLAQSVVF FLGLYSIALGTGGIKPCIWPIGADQFDDTDNKERASKGSFFNWNYFTSNIGALIGVSALVWIEENIGWGLGYGIATSSIG IGMIVFFLGTPLYRLQKPGGSPLTRICQVVAAALRKWKLEVPQDSFLLFEVAETNSSIKGSPKLEHSDGLRFLDKAAVLS DAEKEGASQVSNPWRLCTVTQVEELKILIRLFPIWATGIIFCAVYAQMSSLFVAQGKRMDKNLGSFKIPAASLSTFALIG VIIWVPIYDRGIVPIAKKFTGNVKGFSDLQRMGIGLFLSIVCMSAAAILESKRLQIAKEFGLVHKNVPVPLSILWQIPQY FLLGAAQVFTFVGQHEFFYEQAPTSMRSFCSALALLTNSLGNYLSTLILIIVAFLTTEDGSSGWITDNLNEGHLDYFFWL LAGLSFLNMLVYIVCARRYKTQKKVYHMSIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 18 | 18 | - | – | |
| Phobius | 1 | 118 | 118 | - | – | |
| PANTHER | 24 | 584 | 561 | 3.1E-256 | – | |
| PANTHER | 24 | 584 | 561 | 3.1E-256 | ||
| SUPERFAMILY | 41 | 582 | 542 | 3.14E-26 | ||
| CDD | 46 | 580 | 535 | 0.0 | – | |
| Pfam | 114 | 545 | 432 | 2.6E-117 | ||
| TMHMM | 115 | 137 | 23 | - | – | |
| Phobius | 119 | 140 | 22 | - | – | |
| Phobius | 141 | 145 | 5 | - | – | |
| Phobius | 146 | 165 | 20 | - | – | |
| TMHMM | 157 | 179 | 23 | - | – | |
| Phobius | 166 | 202 | 37 | - | – | |
| TMHMM | 200 | 222 | 23 | - | – | |
| Phobius | 203 | 222 | 20 | - | – | |
| Phobius | 223 | 227 | 5 | - | – | |
| TMHMM | 226 | 248 | 23 | - | – | |
| Phobius | 228 | 248 | 21 | - | – | |
| Phobius | 249 | 346 | 98 | - | – | |
| Phobius | 347 | 368 | 22 | - | – | |
| TMHMM | 351 | 373 | 23 | - | – | |
| Phobius | 369 | 387 | 19 | - | – | |
| Phobius | 388 | 408 | 21 | - | – | |
| TMHMM | 388 | 408 | 21 | - | – | |
| Phobius | 409 | 428 | 20 | - | – | |
| TMHMM | 429 | 451 | 23 | - | – | |
| Phobius | 429 | 449 | 21 | - | – | |
| Phobius | 450 | 468 | 19 | - | – | |
| Phobius | 469 | 492 | 24 | - | – | |
| TMHMM | 471 | 493 | 23 | - | – | |
| Phobius | 493 | 512 | 20 | - | – | |
| Phobius | 513 | 536 | 24 | - | – | |
| TMHMM | 514 | 536 | 23 | - | – | |
| Phobius | 537 | 555 | 19 | - | – | |
| TMHMM | 556 | 575 | 20 | - | – | |
| Phobius | 556 | 575 | 20 | - | – | |
| Phobius | 576 | 591 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0016600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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