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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0016600 |
| Transcript ID | LotjaGi4g1v0016600.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptide transporter; TAIR: AT2G02040.1 peptide transporter 2; Swiss-Prot: sp|P46032|PTR2_ARATH Protein NRT1/ PTR FAMILY 8.3; TrEMBL-Plants: tr|A0A0L9T8C7|A0A0L9T8C7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0016600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:2127285..2131575) extracted from Lotus japonicus Gifu genome v1.2.
GCCCCTCCCTGTAACCAAAAAATAATAGTATTTGAACTTGAATCAATATCCTCCACTTTCTTCTTCTCCTCCAAAAACAA ATGGGTTCTTCTGTGAACGAGCTTCTGTTTCTGGAAGAGCCTCTTCTTCAGGTACGTGCTCCCTCCTCCATGATGACATA ACTAAACATACTCATCATACTTATATATTTTAGTTAAGTTTTGGATGAGATAATATCAAAATATAACACTTAGTGTTAGA CAATAGAGTAGTTGAGAAGTCATGTCGTGGTGAGAACCACCGTCTTGAAGCAAATTTCCGGTGTTGTAAATCCTATGAGT CGGTTTTGACCTCAAGGGTTTACACAGCTGAAAATCTAATTAACTCGTGCTCTCGAGGTAGAGCGCCTTGGAGCCTTCAC AATCCTCAATTGCCTATAAGAAATACAGAGGAGGAGGGTCATGGAGCTATAGAGAAGATGACCCTTCCTGAAATCACTTT CAATTGATAACGTTAAAGATAGATAACTTCATTGATGACCAATAGCAAATGAAAGGAAATAAGCAAGATTGAAGGCCAAG AGTTGCTACTGCCAATTGCTGAAAAGTAACGTGAAACAAGCTCTTAAATGCTAAATAATTCACGTGCTTAAGTTAGGAAA AGTCAATGGTAGAAGATTAACTGAATTGCCATTATCTAACCCTTAGAACTGAAGTTTGACATGAAGCTAATGTCAATTAC AATACTTGGTTAATTTTCCAGAACTCTGTTTTTAGTTTTTGCCTTTTCCTCTACTTTGAGGTATTTTCATATTTGTCTTG CACTCTTGCTTAATGTTAGAAAAGCAAAATTACTCTTTGTTTTATCAATGTTTCCAGAAAAAAAGATCAAAATGTTTCTG AGTGCTATTTTGCTGTGTCATGTGATTGTTTATCTTTTTCTGAAGGATGAAGGGGACAGTCAATACACAGGAGATGGCTC AGTTGACATTAGAGGAAGGCCTGTTCTTAAGCAGAATACTGGGAATTGGAAAGCATGCCCCTTTATTCTAGGTATGCTTT TAGTCTTTTACATTGTTCTTATGTTACTTGTGTATTAAATAACCCACTTCTTATAAATATTATATCTATGTATTTAATGC CAGGCAATGAATGTTGTGAACGTTTAGCTTTCTTCGGCATTGCAACGAATCTTGTTACCTATCTTACCACCAAATTACAT CAAGAAAACGTCTCTGCTGCGAGAAATGTCAGCATCTGGCAAGGCACTTGTTATCTTACGCCTCTCATTGCAGCTGTTCT TGCAGATGGTTATTGGGGACGATACTGGACAATTGCTGTTTTCTCTATGATTTATGTCTTAGTAATAAACTAAACTTGAT CTCTTCACCTAGTCATATATTTTCCCACACACAACTCTCTTGACAGTCATTGTAGAAATTAGCTGATATCTTCTGTTATC ATTTTTCTTTGTCCAGAAGGACATCAATCTTAGACATGAACAATAGGGGCATATGATTCTTGCTTGATCCTGTTCTGGAT CAGCTACACAATATGCATATAAGGTGTTTGGATTGGCAGTGCACACACAATTTAAAGCATGTAAATCCCAAAAACTACAT GTAACATCCCAATCTGACAACTTTTCCCACCATATCAACACGAGTTTTTCAGTGCTGTTTGTCCTTACTCATGTGCTCCC TAAGAAATATTTCCAGAAGGTCACCCATCTCATATTGTTCCAAAGCAAACAAGCTTAATCTTGGAGTTTCTATGAACTGA GCACAAGAAAAGAAAATGCATCTTGTTGTTATGGGTAGTACTTATCAAAAGTCCTCCTTAACTGTATAGGCTCATACCTA TACTTATCTCGCGTTCTGGTGCCAACTAGGTTCAGTCATGTTTCCTTCCGCCTAGAAGCTGCTCTTTGTCTGTGCCTTCT CATTGCATCGGTGATCACTCTCTACCCTCGCTGACCTCAGGCATCACACCATATTTTGTATTTTTTCCTGAAAGTGATTA TGTTAGGGTTCTAAATATTGGGTCTGATTGACTTGTGGACCTGAGTTTAGTTTATTTGGTTTATTTTTATCTGTTAATTG GTAGTCTATCTCTATCTTTAACTCTATCTTTATTTCTTTAGTAGGGTTAGTTTATTATAAATAGGAGTGTCTCCTTAGGT AAGAGCATGATTTGTGCATTAGAGTTTGCAAAGGGATTTACCCTTGGAATGGTTTCACCCTTGGAAATAAGATTCTCCTT CATATTTGAATCAATTTGTATTGTTTTCGTTTATCATCTCTTCTCTTTTTTTTTATGCTGTTGGGTTATTTCCTAACCTA ACAGATTGTGTGATTCACAAAAGCAGAACCAAACAAGCTCATAATTACATATATGCCTTGGTTTTGATTGTCCTCGCATT TTTTCTAACAAGTGCCATGTGATATGGCTGTTTCATGCAGGGGTTGTGTGTGTTGACTCTTTCTGCATCTCTTCCAGCTT TGAAGCCAGCTGAATGTTTTGGTTCTGCCTGCCCATCAGCTACTCCAGCACAATATGCTGTGTTATACTTTGCTCTCTAT GTAATTGCACTTGGAACTGGTGGTGTAAAATCATGTGTGTCATGTTTTGGGGCAGATCAGTTTGATGATACTGATCCCAA TGAAAGGATAGGGAAGGCTTCCTTTTTCAACTGGTTTTACTTTTCGATCGACTTAGGTGCTGTGGTATCATGCAGCTTCA TTGTGTGGGTTCAAGATAATGCAGGATGGGGTCTTGGATTTGGCATTCCTGCTTTTTTTATGGGAATAGCTATTGGAAGC TTATGTTTAGGCACACCTCTCTACAGGTTTCAAAAACCCTGGGGAAGCCCTGTTACAAGAGTGTCCCAGGTTGTGTTAGC ATCAATCCGGAAGCGGAATCTGGTTGTCCCCGATGATAGTAGTCTCCTGTATGAGGCGCCGAACAAGAGACTTGAAAACA AAGGGAGTCGCAAACTGATGCATATTGATGATCTGAGGTATTTGTCTTTACATGGAGTTTTATGTAGTAGTGTTATTAGC TTTATTAATTGTCTCAATATATGGCAAAGCATTATCTGTTGTATGTTGACATTCTATCTCATTCTTTTTAATATGCAATT TGTTTAATACCAAATTGGGAATTGGTTGTTTATGGGAAAAATGTGATCTGAGCCCTGCTCTTATGTTGCTTCTGTAGAAT TGTATATGTTAGGTTCTAACTGGCCAGTTACAAATTAGATAGACTTTTCATTTTTGTTTAAATGAAGGTTTCTTGATAGA GCAGCTATAGTGTCTGATTCCGAGAGCAGAAGTGGTGACTATACTAATCCATGGAGGCTTTGCACCGTGACACAGGTAGA GGAATTGAAAATCTTGATCCGCGTGTTACCAATTTGGGCTACTGGAATTGTTTTTGCTGCTGTTTATGCCCAGATGTCAA CATTGTTTGTGGAACAAGGAATGATGATGGACACAAGTATTGGTTCCTTCAACTTACCACCAGCTTCCCTCGCAACTTTT GACGTGATGAGTGTTGTTTTGTGGGTTCCTGTATATGACAGGATCCTTGTTCCTATTGCAAGGAAATTTACAAGCAAGGA AAGTGGCTTTTCAGTGTTTCAGAGAATGGGAATTGGCCATTTTATTTCTGTCCTATGCATGTCATCAGCTGCTGTCGTGG AAATTGCGCGCCTGCAACTTGCCAGAGAGCTTGACCTTGTGGATAAACCTGTTTCTGTCCCTTTTAGTGTGTTCTGGCAA ATACCTCAATATTTCTTATTAGGCGCAGCAGAGGTATTCACACTCATTGGGCAGCTTGAGTTCTTCTATGACCAATCTCC AGATTCTATGCGGACTTTATGTAGCGCGCTGTCACTCATTAATTTTTCATTGGGGAATTACTTGAGCTCTTTCATTCTTA CTATAGTAACTTACTTCACTACACAAGGTGGAAATCCTGGGTGGATTCCAGATAACTTGAACAAAGGTCATCTTGATTAC TTTTTCTGGCTTTTAGCTGGACTTAGCTTCTTAAATATGTTGGTGTACATAGTTTCTGCAAAAAGGTTCAAGCAGAAGAA GGCTTCTTAAGATTTTTCAAGCATTATTCTTCTTCCACTTAACTAGTTCAACACAGGCCCTGCTCCCTCTCATGAAGCCT TTTACTCAGAGCTGAACTGGCTGCATAACACATTCATGTAAATTGTTGGTTGTTAATGTTCACTTGCTGTATATTGTAAA AATCACATTATCTACATTATCTTCAATTGATATCCGATTATTTAGTCTCCA
CDS sequence (LotjaGi4g1v0016600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTCTTCTGTGAACGAGCTTCTGTTTCTGGAAGAGCCTCTTCTTCAGGATGAAGGGGACAGTCAATACACAGGAGA TGGCTCAGTTGACATTAGAGGAAGGCCTGTTCTTAAGCAGAATACTGGGAATTGGAAAGCATGCCCCTTTATTCTAGGCA ATGAATGTTGTGAACGTTTAGCTTTCTTCGGCATTGCAACGAATCTTGTTACCTATCTTACCACCAAATTACATCAAGAA AACGTCTCTGCTGCGAGAAATGTCAGCATCTGGCAAGGCACTTGTTATCTTACGCCTCTCATTGCAGCTGTTCTTGCAGA TGGTTATTGGGGACGATACTGGACAATTGCTGTTTTCTCTATGATTTATGTCTTAGGGTTGTGTGTGTTGACTCTTTCTG CATCTCTTCCAGCTTTGAAGCCAGCTGAATGTTTTGGTTCTGCCTGCCCATCAGCTACTCCAGCACAATATGCTGTGTTA TACTTTGCTCTCTATGTAATTGCACTTGGAACTGGTGGTGTAAAATCATGTGTGTCATGTTTTGGGGCAGATCAGTTTGA TGATACTGATCCCAATGAAAGGATAGGGAAGGCTTCCTTTTTCAACTGGTTTTACTTTTCGATCGACTTAGGTGCTGTGG TATCATGCAGCTTCATTGTGTGGGTTCAAGATAATGCAGGATGGGGTCTTGGATTTGGCATTCCTGCTTTTTTTATGGGA ATAGCTATTGGAAGCTTATGTTTAGGCACACCTCTCTACAGGTTTCAAAAACCCTGGGGAAGCCCTGTTACAAGAGTGTC CCAGGTTGTGTTAGCATCAATCCGGAAGCGGAATCTGGTTGTCCCCGATGATAGTAGTCTCCTGTATGAGGCGCCGAACA AGAGACTTGAAAACAAAGGGAGTCGCAAACTGATGCATATTGATGATCTGAGGTTTCTTGATAGAGCAGCTATAGTGTCT GATTCCGAGAGCAGAAGTGGTGACTATACTAATCCATGGAGGCTTTGCACCGTGACACAGGTAGAGGAATTGAAAATCTT GATCCGCGTGTTACCAATTTGGGCTACTGGAATTGTTTTTGCTGCTGTTTATGCCCAGATGTCAACATTGTTTGTGGAAC AAGGAATGATGATGGACACAAGTATTGGTTCCTTCAACTTACCACCAGCTTCCCTCGCAACTTTTGACGTGATGAGTGTT GTTTTGTGGGTTCCTGTATATGACAGGATCCTTGTTCCTATTGCAAGGAAATTTACAAGCAAGGAAAGTGGCTTTTCAGT GTTTCAGAGAATGGGAATTGGCCATTTTATTTCTGTCCTATGCATGTCATCAGCTGCTGTCGTGGAAATTGCGCGCCTGC AACTTGCCAGAGAGCTTGACCTTGTGGATAAACCTGTTTCTGTCCCTTTTAGTGTGTTCTGGCAAATACCTCAATATTTC TTATTAGGCGCAGCAGAGGTATTCACACTCATTGGGCAGCTTGAGTTCTTCTATGACCAATCTCCAGATTCTATGCGGAC TTTATGTAGCGCGCTGTCACTCATTAATTTTTCATTGGGGAATTACTTGAGCTCTTTCATTCTTACTATAGTAACTTACT TCACTACACAAGGTGGAAATCCTGGGTGGATTCCAGATAACTTGAACAAAGGTCATCTTGATTACTTTTTCTGGCTTTTA GCTGGACTTAGCTTCTTAAATATGTTGGTGTACATAGTTTCTGCAAAAAGGTTCAAGCAGAAGAAGGCTTCTTAA
Protein sequence (LotjaGi4g1v0016600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSSVNELLFLEEPLLQDEGDSQYTGDGSVDIRGRPVLKQNTGNWKACPFILGNECCERLAFFGIATNLVTYLTTKLHQE NVSAARNVSIWQGTCYLTPLIAAVLADGYWGRYWTIAVFSMIYVLGLCVLTLSASLPALKPAECFGSACPSATPAQYAVL YFALYVIALGTGGVKSCVSCFGADQFDDTDPNERIGKASFFNWFYFSIDLGAVVSCSFIVWVQDNAGWGLGFGIPAFFMG IAIGSLCLGTPLYRFQKPWGSPVTRVSQVVLASIRKRNLVVPDDSSLLYEAPNKRLENKGSRKLMHIDDLRFLDRAAIVS DSESRSGDYTNPWRLCTVTQVEELKILIRVLPIWATGIVFAAVYAQMSTLFVEQGMMMDTSIGSFNLPPASLATFDVMSV VLWVPVYDRILVPIARKFTSKESGFSVFQRMGIGHFISVLCMSSAAVVEIARLQLARELDLVDKPVSVPFSVFWQIPQYF LLGAAEVFTLIGQLEFFYDQSPDSMRTLCSALSLINFSLGNYLSSFILTIVTYFTTQGGNPGWIPDNLNKGHLDYFFWLL AGLSFLNMLVYIVSAKRFKQKKAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 87 | 87 | - | – | |
| Gene3D | 16 | 584 | 569 | 1.4E-216 | – | |
| PANTHER | 17 | 583 | 567 | 1.2E-275 | ||
| PANTHER | 17 | 583 | 567 | 1.2E-275 | – | |
| SUPERFAMILY | 41 | 581 | 541 | 2.09E-21 | ||
| CDD | 45 | 579 | 535 | 0.0 | – | |
| TMHMM | 88 | 110 | 23 | - | – | |
| Phobius | 88 | 106 | 19 | - | – | |
| ProSitePatterns | 102 | 126 | 25 | - | ||
| Phobius | 107 | 112 | 6 | - | – | |
| Pfam | 113 | 543 | 431 | 2.7E-123 | ||
| Phobius | 113 | 139 | 27 | - | – | |
| TMHMM | 115 | 137 | 23 | - | – | |
| Phobius | 140 | 158 | 19 | - | – | |
| TMHMM | 157 | 179 | 23 | - | – | |
| Phobius | 159 | 182 | 24 | - | – | |
| Phobius | 183 | 202 | 20 | - | – | |
| TMHMM | 200 | 222 | 23 | - | – | |
| Phobius | 203 | 222 | 20 | - | – | |
| Phobius | 223 | 227 | 5 | - | – | |
| TMHMM | 226 | 248 | 23 | - | – | |
| Phobius | 228 | 248 | 21 | - | – | |
| Phobius | 249 | 349 | 101 | - | – | |
| TMHMM | 346 | 365 | 20 | - | – | |
| Phobius | 350 | 372 | 23 | - | – | |
| Phobius | 373 | 391 | 19 | - | – | |
| TMHMM | 385 | 407 | 23 | - | – | |
| Phobius | 392 | 412 | 21 | - | – | |
| Phobius | 413 | 432 | 20 | - | – | |
| Phobius | 433 | 456 | 24 | - | – | |
| TMHMM | 433 | 455 | 23 | - | – | |
| Phobius | 457 | 475 | 19 | - | – | |
| TMHMM | 470 | 492 | 23 | - | – | |
| Phobius | 476 | 498 | 23 | - | – | |
| Phobius | 499 | 509 | 11 | - | – | |
| Phobius | 510 | 535 | 26 | - | – | |
| TMHMM | 513 | 535 | 23 | - | – | |
| Phobius | 536 | 554 | 19 | - | – | |
| TMHMM | 555 | 574 | 20 | - | – | |
| Phobius | 555 | 574 | 20 | - | – | |
| Phobius | 575 | 584 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Oligopeptide transport | The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0016600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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