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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0016600 |
| Transcript ID | LotjaGi4g1v0016600.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptide transporter; TAIR: AT2G02040.1 peptide transporter 2; Swiss-Prot: sp|P46032|PTR2_ARATH Protein NRT1/ PTR FAMILY 8.3; TrEMBL-Plants: tr|A0A1J7HNZ3|A0A1J7HNZ3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0016600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:2139372..2143745) extracted from Lotus japonicus Gifu genome v1.2.
AAATTATTTTTATTGCTTGTAAAAGCCTATAAAAGGCGAACATGTGCACAGATTTTGTATAAAGATTGAAATTGGGAAGA AACATAAGAACTCCTTGTCTCTCTCTCGCTGTTACAGTGTGTACTTTGAGATTTTAGTCTTCAATAATGTCAACGACACT CGAAAATGTAAGCTTTTAGTTCAATTATCAATCTTATAGACAGTGAGACAAAATTTGCACAATTCAGCTCCACTGGTTAC TTTCTTCATTTTCCTCCTCTGCATGTTTATTTACTCACTTCTGTTATCTAGCTAGGTTCCTGTTGTTAGAAATATAATGT GTCAGAGCTTTTGGGATATCAGAGTTTCTATGACTAAAGGGTTTAGAATTCGATCATTGTCGCCCCTCATTCTTCAAACA AAAAGTTGAATTTCAACAATGGTAGTGAGCATGTGCATTATCCACGCTTGAAGCCCAAGTTGGCTCCTGCGTAGGGCGTG TTAGAAATATAATCATTCGTGTGTCATTTAACCAATAGCTTAAGCTTTTGGAGTAATTGGTTCTTGACATGATATTATAG CTTTTATGAGTAAGTGGTCTAGAATTCGATTATTGTCCTCCATTCTAATAAAATGTTGAATTTCACCAAATGATAGGTGA GTCTGTGCATTATCCACACTTCAAGTCCAAGTTAACTCTTGCATCATGTATCCCCAATAGCTTAAGCTTTTAGCATAATT GGTTTTTGACATTAACACCTGTGTTACTTAACCAACTTCAATTTTTGTATTATGTTATTATTTTGATTTTTTTTCAGGGT GATGATAGTCCTCACCCGGGAGATGGATCAGTAAACATCAACGGAGAGCTTGCTGTCAAGAGGAAAACTGGGACATGGAG AGCATGCTTCTTTGTTGTAGGTGATAATCTCCTCTCTATATTTGTGTTGTGTTTTCAAGTATGAGTTTTGAGTTACACAT TGTTTAAGAATTGGTCACTTGAAGACAAGATGTGACTAATTATGTATAAAGACAGATGTATTTTGAGTTTTGACACATTT TTTATGTGATAATTACAGGCACTTTCTTCTGTGAACGTTTGGCATATTTCGGGATTGCCTCTAATCTTCTTATTCATCTC ACCGCAAAACTGAATATAAGCCTTGTCTCTGCTGCAAAAAACGTTAACACATTTCAGGGAACATGCTATCTTACACCTCT CATCGGATCCTTCTTAGCTGATGCTTACTGGGGAAGATATTGGACCATTGCCGTGTTCTACTCAGTCTATCTCATTGTAA GCTCAATTCAAACTAAATAATCTGTGATTTTTCGTTCATTCATGTCCAAAATTTCTATATTCTGTTTGGAAGCCCTTGTT TTGAATTTGAGTTCTGTAATTCAGTCAACCATTTGTTATCTGCATTAAATAGGGTTTTAAATTGGGGTCGCAGTTGCCGC TGCGTTGCAGAATTGTGGATAAAAGTGGGTTGATGCGGCTGCAATTGCAGTTGCGGACCACAATTTGAAATTGTTAATTT ATCTCTGCCATTTTATATAGATATTGGGCGTGTTAGGCTAAATTCCTCTATTATGCGTTTCTGGTATTATAAGCTAATTT GAGAAAATTATTAAAGTATGCTGAATATAGGTAACAGGTAAGCTAAGCTTGTTATTCATAAGCTAATCTGAACGACTTAT GAAAATAAGCTCAAAATAGCTTACAGATAGGCCATAACAATTTACATAAGCTCTTCTAAATACTTGTATAAGCGTTTATG CTATAAGATTAGCTCAATTAAGCACTTCTAAACGGGGCCATTGTGTTTTTAGCTAATAATTGATTTGTACAGGGAATCTG CATATTGATTCTTTCAGCATCTATTCCTGCACTGAAGCCAGTGGAGTGTGTGAATTCTGTGTGCCCACCACCAACTGTAA ATCAAAGTGTTGTGTTCTTCTTAGGACTGTATTTGATAGCACTGGGGACAGGTGGGGTCAAGCCATGTATTTGGCCAATT GGGGCAGATCAGTTTGATGATACAGATCGTAAGGAAAAAGCAAGTAAAGGATCCTTCTTTAACTGGAATTATTTCACTAG TAACATTGGTGCACTTATAGCAGTCACTGCATTGGTATGGATTGAAGAAAATGTTGGATGGGGCCTCGGATATGGCATTG CTGCATCATTTATTGGTATTGCAATCGTTGTTTTCTTTCTCGGTACACCTTTTTATAGGCTTCAAAGGCCAGGGGGAAGT CCTCTTACAAGAATATGTCAGGTGGTTTCTGCTACTTTGCGTAAGTGGAAAGTGGAGGTTCCTCAGGATAGTTGTATGCT CTTTGAAATAAAAGCGAGGAATTCCTCGACTGATGGAAGTTCTAGACTAGAGCATAGCGATGGATTGAGGTATCTCACAG CTTCAAACATCTTTTGATAACAAATTATACTGTCCTTGTGTTCCTCTGCTCAATTCGTAGATAGTATTGTTTGCTTGATA TGTTTCCCAAAATATATGTCTCACATTGACTAGTAATGGTATTTGTTAAAAAGTCTCACATTGACTAAAGATATCATATG ACAAATATGTCCATATATGAAATAGAACAATCCTCACATCTAAGTCAGCTTTTTGGGTAGAGTTAGGCCTAAATCAAATT CTAAGAGCATTCCTATTTGAGGTGAATTTAGAAATAAATCACAACTTTGCTTTAAAGGGGATAGGAAGAAGAAAAGGGAG GTGTTGCTTCATGAAGTTGAAAACCTGTTTTGTGTTTACTTATACTGTGAATGCTTCTAGGCTTTATAAAACTCTGATTC TTTATTTTGCTGAGGACAAAGAACAAGGCAACTAGCACTTTGAGTAAGACAAGTTGTAGGAAAAAAGGTAAATTCAATTC TCTACACTAATGCAACTATGCTAAAAAGTATTAGCCTTTACTTTTGTCCAGGTTCCTAGATAAAGCAGCAGTGCTATCAG ATACAGAGAAAGAGGGTGCCGAAGTATCTAATCCATGGAAGCTTTGCACTGTAACTCAGGTGGAAGAGTTGAAGATTTTG ATCCGCTTGTTTCCAATCTGGGCGACCGGAATAATCTTCTGTGCTGTGTATGCTCAAATGTCTTCAATGTTTGTCGCGCA AGGGAAGAAGATGGACACCCATCTTGGTTCTTTCAAAGTTCCGGCAGCCTCTCTTTCAACTTTCGCCATCATCGGTGTCA TTATTTGGGTTCCCATTTATGATAGAGGGATTGTTCCAATTGCAAGAAAATTCACCGGCAATGTAAAGGGCTTCTCAGAA TTGCAAAGGATGGGAATTGGCTTATTTATCTCCATTATGTGCATGTCAGCTGCTGCTATAGTAGAGACCAAGAGATTACA AAAGGCAAAGGAGTATGGACTGGTTCATAAAAAAGTCCCTGTACCACTAAGTATATCATGGCAAATACCTCAATATTTCT TGCTTGGTGCTGCAGAGGTGTTCACCTTTGTTGGACAACATGAATTTTTCTATGAGGAAGCGCCGCCTTCGATGCGTAGT GTCTGCAGCGCATTGGCACTTCTAACAAATTCATTGGGGAACTACCTGAGCACTTTGATTCTTACTATTGTTGGTCACAT CACAAGAAAATATGGAAATCATGGATGGATAACAAATAATTTGAATGAGGGCCATCTAGATTACTTTTTCTGGATGCTGG CTGGTCTCAGTTTCTTAAACATGTTGGTTTATATTGTCTGTGCTATACGGTACAAGAAACAAAAGGTTTATCACATGAGT GACTCACCATAAGTGACCCACTCCAAGTAAAAATTCTTGATTATTTGATTGGTTTGTTTCCAGCAGTTACAACATTCATC ATTGTTAGAAGCTCCACCTCTGCATCAAGGTCACAGACTCAGGGTTAATGATAGCAACTCAGCCCAAATGATCTTGGTCT AGACTAGAAGCTACTGCTACTGCTGGTTAGGCGCGAGCGAGACTGGAGTGATTGTATCCATTATCATGTCACATTATCTT ATATTTCATATATATCCTGATGTTGATTCGGTTATTTTGCTGTTTTGATGTTCTGCTATCTTTTGTATCAGAAATTGTTG CATTGTGAGTGTATGATTGGTTATATATGATAATTGAAATGTAAGAAAAGGCAGGCAGAAACTCATTTCACAAACTCTGA TTCTCTCTCTCATTTCTTGAGGTTCCCCTGACCTAAAATTGTTGCAGGACTTTGTCTCTATGTGTGAGACTCAATAGAAA TGGATTAATCTATTTTTTCCTGTTGTAGATTATAAGTATACTCTTACAAAAAGAGTTGCATCTTTTAGTCTTCTGCGTCA TAATTCTCGGAATGTTGTTGGAAAAAATTTATCTCACTTTAAAGAAATTAGCGG
CDS sequence (LotjaGi4g1v0016600.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAACGACACTCGAAAATGGTGATGATAGTCCTCACCCGGGAGATGGATCAGTAAACATCAACGGAGAGCTTGCTGT CAAGAGGAAAACTGGGACATGGAGAGCATGCTTCTTTGTTGTAGGCACTTTCTTCTGTGAACGTTTGGCATATTTCGGGA TTGCCTCTAATCTTCTTATTCATCTCACCGCAAAACTGAATATAAGCCTTGTCTCTGCTGCAAAAAACGTTAACACATTT CAGGGAACATGCTATCTTACACCTCTCATCGGATCCTTCTTAGCTGATGCTTACTGGGGAAGATATTGGACCATTGCCGT GTTCTACTCAGTCTATCTCATTGGAATCTGCATATTGATTCTTTCAGCATCTATTCCTGCACTGAAGCCAGTGGAGTGTG TGAATTCTGTGTGCCCACCACCAACTGTAAATCAAAGTGTTGTGTTCTTCTTAGGACTGTATTTGATAGCACTGGGGACA GGTGGGGTCAAGCCATGTATTTGGCCAATTGGGGCAGATCAGTTTGATGATACAGATCGTAAGGAAAAAGCAAGTAAAGG ATCCTTCTTTAACTGGAATTATTTCACTAGTAACATTGGTGCACTTATAGCAGTCACTGCATTGGTATGGATTGAAGAAA ATGTTGGATGGGGCCTCGGATATGGCATTGCTGCATCATTTATTGGTATTGCAATCGTTGTTTTCTTTCTCGGTACACCT TTTTATAGGCTTCAAAGGCCAGGGGGAAGTCCTCTTACAAGAATATGTCAGGTGGTTTCTGCTACTTTGCGTAAGTGGAA AGTGGAGGTTCCTCAGGATAGTTGTATGCTCTTTGAAATAAAAGCGAGGAATTCCTCGACTGATGGAAGTTCTAGACTAG AGCATAGCGATGGATTGAGGTTCCTAGATAAAGCAGCAGTGCTATCAGATACAGAGAAAGAGGGTGCCGAAGTATCTAAT CCATGGAAGCTTTGCACTGTAACTCAGGTGGAAGAGTTGAAGATTTTGATCCGCTTGTTTCCAATCTGGGCGACCGGAAT AATCTTCTGTGCTGTGTATGCTCAAATGTCTTCAATGTTTGTCGCGCAAGGGAAGAAGATGGACACCCATCTTGGTTCTT TCAAAGTTCCGGCAGCCTCTCTTTCAACTTTCGCCATCATCGGTGTCATTATTTGGGTTCCCATTTATGATAGAGGGATT GTTCCAATTGCAAGAAAATTCACCGGCAATGTAAAGGGCTTCTCAGAATTGCAAAGGATGGGAATTGGCTTATTTATCTC CATTATGTGCATGTCAGCTGCTGCTATAGTAGAGACCAAGAGATTACAAAAGGCAAAGGAGTATGGACTGGTTCATAAAA AAGTCCCTGTACCACTAAGTATATCATGGCAAATACCTCAATATTTCTTGCTTGGTGCTGCAGAGGTGTTCACCTTTGTT GGACAACATGAATTTTTCTATGAGGAAGCGCCGCCTTCGATGCGTAGTGTCTGCAGCGCATTGGCACTTCTAACAAATTC ATTGGGGAACTACCTGAGCACTTTGATTCTTACTATTGTTGGTCACATCACAAGAAAATATGGAAATCATGGATGGATAA CAAATAATTTGAATGAGGGCCATCTAGATTACTTTTTCTGGATGCTGGCTGGTCTCAGTTTCTTAAACATGTTGGTTTAT ATTGTCTGTGCTATACGGTACAAGAAACAAAAGGTTTATCACATGAGTGACTCACCATAA
Protein sequence (LotjaGi4g1v0016600.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSTTLENGDDSPHPGDGSVNINGELAVKRKTGTWRACFFVVGTFFCERLAYFGIASNLLIHLTAKLNISLVSAAKNVNTF QGTCYLTPLIGSFLADAYWGRYWTIAVFYSVYLIGICILILSASIPALKPVECVNSVCPPPTVNQSVVFFLGLYLIALGT GGVKPCIWPIGADQFDDTDRKEKASKGSFFNWNYFTSNIGALIAVTALVWIEENVGWGLGYGIAASFIGIAIVVFFLGTP FYRLQRPGGSPLTRICQVVSATLRKWKVEVPQDSCMLFEIKARNSSTDGSSRLEHSDGLRFLDKAAVLSDTEKEGAEVSN PWKLCTVTQVEELKILIRLFPIWATGIIFCAVYAQMSSMFVAQGKKMDTHLGSFKVPAASLSTFAIIGVIIWVPIYDRGI VPIARKFTGNVKGFSELQRMGIGLFISIMCMSAAAIVETKRLQKAKEYGLVHKKVPVPLSISWQIPQYFLLGAAEVFTFV GQHEFFYEEAPPSMRSVCSALALLTNSLGNYLSTLILTIVGHITRKYGNHGWITNNLNEGHLDYFFWMLAGLSFLNMLVY IVCAIRYKKQKVYHMSDSP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 35 | 35 | - | – | |
| PANTHER | 6 | 572 | 567 | 2.0E-257 | ||
| PANTHER | 6 | 572 | 567 | 2.0E-257 | – | |
| Gene3D | 7 | 576 | 570 | 2.3E-207 | – | |
| SUPERFAMILY | 26 | 571 | 546 | 1.83E-30 | ||
| CDD | 34 | 568 | 535 | 0.0 | – | |
| Phobius | 36 | 60 | 25 | - | – | |
| TMHMM | 38 | 60 | 23 | - | – | |
| Phobius | 61 | 79 | 19 | - | – | |
| Phobius | 80 | 99 | 20 | - | – | |
| Phobius | 100 | 105 | 6 | - | – | |
| Pfam | 102 | 533 | 432 | 8.1E-122 | ||
| TMHMM | 105 | 127 | 23 | - | – | |
| Phobius | 106 | 128 | 23 | - | – | |
| Phobius | 129 | 147 | 19 | - | – | |
| TMHMM | 147 | 169 | 23 | - | – | |
| Phobius | 148 | 171 | 24 | - | – | |
| Phobius | 172 | 191 | 20 | - | – | |
| TMHMM | 189 | 211 | 23 | - | – | |
| Phobius | 192 | 211 | 20 | - | – | |
| Phobius | 212 | 216 | 5 | - | – | |
| TMHMM | 215 | 237 | 23 | - | – | |
| Phobius | 217 | 237 | 21 | - | – | |
| Phobius | 238 | 334 | 97 | - | – | |
| Phobius | 335 | 356 | 22 | - | – | |
| TMHMM | 335 | 357 | 23 | - | – | |
| Phobius | 357 | 375 | 19 | - | – | |
| Phobius | 376 | 396 | 21 | - | – | |
| TMHMM | 377 | 396 | 20 | - | – | |
| Phobius | 397 | 416 | 20 | - | – | |
| TMHMM | 417 | 439 | 23 | - | – | |
| Phobius | 417 | 437 | 21 | - | – | |
| Phobius | 438 | 456 | 19 | - | – | |
| Phobius | 457 | 480 | 24 | - | – | |
| TMHMM | 459 | 481 | 23 | - | – | |
| Phobius | 481 | 500 | 20 | - | – | |
| Phobius | 501 | 524 | 24 | - | – | |
| TMHMM | 502 | 524 | 23 | - | – | |
| Phobius | 525 | 543 | 19 | - | – | |
| TMHMM | 544 | 566 | 23 | - | – | |
| Phobius | 544 | 565 | 22 | - | – | |
| Phobius | 566 | 579 | 14 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0016600.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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