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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0041900 |
| Transcript ID | LotjaGi4g1v0041900.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone DnaK; TAIR: AT5G09590.1 mitochondrial HSO70 2; Swiss-Prot: sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial; TrEMBL-Plants: tr|A0A0S3QZX4|A0A0S3QZX4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0041900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:4943962..4949103) extracted from Lotus japonicus Gifu genome v1.2.
TTCATTTTTATTCTTTTCTAAAATTTGAGAAAATATATATTTTGTCTTGAGGAGCAAGAAGAGTGTAACGAATTTTCCAC CGCTCATCTTGATCCAGATGACCCTATTTAATTGGACACCACATAAACCCTAAACTAAACCCTGACTTCTCTCTTCTTCC CTCCGATCAGCCATGGCCGCCGCCACCGCCTTGCTCCGATCCCTCCGCCGTCGCGACCTTGCCCCTTCTACTGTCTCTGC CTTCCGATCGGTACATACATCACTACACTCTCTTTTGTTCCATTTACATCTTCAGTTTCATTCTATTCGAGATTGTATAA TCACTTATGGGAAATAATGATGAAATAACTGATAATGCGTACTACTAGATCTTTGAATCAATATGTGTTGTATGCATTTT ATAGGAGATATAATCACTTTTCAGATTTTGAGCTGTTGATTGATTCTTTGGACCATGTAGTGGCTCAAACTTGTACTGGA TTATCTCATTATCTGTGGAATTAACTTAGTTGTTGATGCTATTGCTTTGTTGGATTGGATTTAATCTAATTTTTCATGAC AATTTCAGAATTTCTTGTCTAATTGAAGTCTATAAGTATATGAATAATTGTTGATTCTTTCATAGAGTTGTGTTTGTTGG ACTTGTGTTGGTCATGTGTGGTTAGACCCATCATTATTCTGATGATAATTTCCATTGGTTGTGCAGTTTTCAGGCAGCAC CAAGACAGCATATGTAGGTCGCAATTGGGCAAGTTTGTCTCGACCTTTTAGGTACCTTATGTTGTTTTGTGTTCATGTGT TACACGTATAATTATAGAAAGATATATTAATTTGGTGCTTTCGGTCTCTCACTGAATTTGCTTTGTAAAATTTGATACTT ACTACAGTTCAAGGCCGGCTGGTAATGATGTCATTGGTATTGATTTGGGTACTACCAATTCATGTGTTTCTGTTATGGAG GGCAAGGCAAGATTTTCTTATTCTTAATTTTTTTTTAATATGTTTCATTACATTGTGTTTGTGACTTTGTGTTGACTGTT GGCTAATATTTATAACAATCTCAGAATGCCAAAGTTATTGAGAATTCTGAAGGAGCAAGGACAACGCCATCAGTTGTTGC CTTCAATCAGAAAGGAGAGCTGCTTGTAGGTACACCAGCCAAGCGTCAGGCTGTGACTAACCCAACAAATACTGTCTTTG TAACCAAGAGAATGATTGGTAGGCGATTTGATGATCCCCAAACTCAGAAGGAGATGAAGATGGTACCGTACAAAATTGTT AAGGCATCCAATGGAGATGCATGGGTTGAAGCCAACGGGAAGCAGTATTCTCCCAGCCAAATTGGTGCTTTTGTTCTCAC CAAGATGAAGGAAACTGCTGAAGCGTACCTTGGAAAATCAGTTTCAAAAGCTGTGGTTACTGTACCAGCTTACTTCAATG ACGCTCAGAGACAGGCTACGAAAGATGCCGGTAGAATTGCCGGTCTTGATGTCCAGAGAATTATCAATGAGCCCACTGCT GCTGCACTTTCGTATGGTATGAACAACAAAGAGGGTCTCATTGCAGTTTTTGATCTTGGAGGTGGAACATTTGATGTGTC CATCTTAGAAATTTCTAATGGAGTTTTTGAGGTATGAACATTAACTTTTTAATCCTTATTTCTTTACATCATTAGGAATC ATGCGGGACATTGTTACTGATAAGATTTTGTTCAGGTTAAAGCAACAAATGGTGACACTTTCTTGGGAGGAGAGGATTTT GATAATACTCTATTGGACTATCTAGTGAGCGAATTCAAAAGAAGTGACAATATTGACCTTTCAAAGGATAAGCTTGCCTT GCAAAGGCTTCGAGAAGCTGCTGAGAAAGCAAAAATAGAACTGTCGTCAACATCTCAAACAGATATAAATCTTCCATTTA TCACTGCTGATGCATCTGGTGCAAAGCATCTGAACATCACATTGACTAGATCAAAGTTTGAAGCTTTAGTGAACAACTTG ATTGAGAGGACAAGGGCACCATGTAAGAACTGCTTGAAGGATGCTAACATATCTCTCAAGGATGTTGATGAGGTTCTTCT TGTTGGAGGGATGACTCGTGTACCTAAAGTACAAGAGGTTGTTCTAGAGATCTTTGGAAAGAGTCCTAGCAAAGGAGTAA ATCCTGATGAGGCCGTTGCTATGGGAGCAGCTATCCAGGGCGGTATCCTACGTGGGGATGTCAAAGAACTTCTACTCCTT GACGTAACTCCACTTTCTCTGGGTATTGAGACGTTGGGTGGTATCTTTACCAGGCTGATCAACAGGAATACAACAATCCC TACTAAAAAGAGTCAGGTAATCCTTAAATGTTGATAATTACTTTTTCTACTTGCCAGACTCTTGAGAGGATTGAATTCAG TCTTTCAAGAGTAATGTAACATTGAAACGACACAATTATATGCTTTGTTGAACAACCCTTCCCCCAAATAAATAAATAAA AAAGGTATCTTACAAAAATTCAAGGTGTTAAAGCGGAGAGCCACTGAAAGTAACTACATCTCTCTCTGGTTTGTAGATAG TTTAGACATTTCAGATGTTGACTCTAAATTTTGATATCAATGTTTCAGGTGTTTTCTACAGCTGCTGACAACCAAACTCA GGTTGGTATCAAGGTGCTACAGGGTGAGCGAGAAATGGCTTCAGACAACAAAATGCTCGGCGAATTTGAGCTTAATGGCA TTCCTCCCTCTCGAAGAGGTGTCCCTCAGATTGAAGTCACATTTGACATAGATGCCAATGGGATCGTTACTGTCTCTGCG AAAGACAAGGCCACCGGAAAAGAACAACAAGTCACCATCCGCTCAGACTCCAGACTCTCTGATGATGAGATTGAGAAGAT GGTCAAAGAAGCAGAGTTGCATGCTCAGAAAGACCAAGAAAGAAAGGCTCTTATTGACATCAGAAACAGTGCGGATACAT CCATCTACAGCATTGAAAATAGCTTAAATGAGTACAGGGATAAGATTCCCAGTGAAGTGGCCAAAGAGATTGAAGATGCA GTTTCAGATTTGAGGAAGGCTATGGCAGGTGAGAATGCCGATGAGATTAAGTCAAAGCTTGATATTGCAAACAAAGCTGT GTCCAAAATCGGAGAGCACATGTCAGGTGGCAAAAGTAGCGGTCCCTCTGATGAAGGTTCTAAGGGTGAGGGCGATCAGG CCCCCGAGGCTGAGTACGAAGAGGTCAAGAAGTGAGAAAGTATGTAGGTTTAGTCTTTTGGTATTTGTTTTTCCCTATCA TAACATAATTGCGAGAAGAATACAGGTTTACTCCTTCATTTGTATCTAATGTTTAAAGCCATTTTTTACTAGTAGGCTAT TTAATTTGTAAGTACTTTTGGAGTACTGAACGCTACTGGTCGAATAACGACATCAAAATTCATGCATAAATTTTGTTCTC TATACTACTTGTGATTGGCTGTTACTAATATTGTGCACCTTGAAGACATGCATATGCTTGTTAAATAGTTAAATTACTTT CTGATATAGGGTGAACACTTAAGTATTCACTAGTTTAATTCATCTCGAAAATTTCCATGAAAGCACAGGTAAATGGCAAA TGTACTGTGCTTGAGCAGAGAGCACAGCAACACACAGCAAGCTATGAAAATCTTCTGTTTTAACATAACTGGCAAGAAAT TACCAGGATCAATGAGTCGGGCTTTAGTTGATTAGAAATCTAATCTGAACTCGGATGTAATTTTTGTAGTAAAGATGCCA TAGTAGCCCAACCAAGTTCCATAACTGTTCATTCGCTTTGCTCATTCAAAATGGCAAGATTTGTTAAGACTCTCTTGTGG CACACTAGTGAAATCTCATTACATAGCAAAACTTGGGGATCCAAGAAAATAAACCTTCTCTATTAATTAAAGTGGACATT GATGTCCACTTGTAGTGGATACATGTGTACAGAGAGGGTAGGTAGTGTTGGAGTTTGAATGAATAGCTGAATCCTGGGGC TGGAAACTTTACATCACTATCAAAGTATCATCATCAACATCACCCATTGAAAATAACAAAGGCAAGAGTTTCTTAGTAAA GACAAAAATCGACCGAAAAGAGAACGCAGCTATGGACAATACTAACATTACTAAACGTTAAAATGTGAACTGCTAAAACA ACCAATGACTTGTCAATCTACATGTTCTAAGAACCAATATTAACAATAAGACTTTATGTTCTTCATCATAAACAAACGGG TATCATTTTAGCTGGAAATTTTGCACATGACATGCATAAGATTGAAGGTGAATGTGGTTGAATGTTAAAGCAAATACGCC CTTAGCGTTTCTTCATCAAAAGAGACACCTGTTAATTATGTACATAATGTATCATGGTTAGGCTTGATGCTTTTGAAAGT ATGGGATTAAACTTTGCTTATTTGATGTGACAGATTTTCTTGATGAATTATTGCTTTGAAGGACAAGGTTGTGCTTACTA ATTTGTTATTGTTGTTGTTACTGATTTTGTTATTTTTATTATGTTTAATATTATTATTAGCTCTTACCTCTGCTTGGTTT TAATTTGGTCTGTACTGCAATCTGTATTTCTTGTGAAAGTGCTTGCAGGAAGCAAAAGATTATATAGATCAGGAAACTTG CACAGAAATGGAACAAGGATAAAGACACTCCATATATCAGAAAACTTATCAGTGTACTCTTCTCACTTGCAGCTAAGAGA AGATACTTTATCAGAGCCTGCTGTGTAGAATATCGAATAGGAATAAGAAAAGTTTTTTCCCTTTGAACTCGTACTGCCAA ATCTTTCCCTCTTGCTCACATGGTAACATGCAAAGTTGCAAACAACTCCGTGCATCGTTGGCACTACCTATACTGGGAGA ATTTTAACATTTTTGTAGGCCATTTGTTACACAATGTTTTGTTGCATGACTTACAGCACCATTTGTCATCTAGTTTACAT AAATGGTTTGGCTAGCTGTTTGGATATTTCAGGACCACTTATTTCTTCAGGGTCGTTTCTTTTGGTACCACCCAAAAACT CTCGCTTTCACCACCCACAGCTTTCGGAAATTAATTTCCAAAAGCCAATCACTTCTGGAAGTTAATTTTTGGAAGCTATT TTGTGGAGCAGTGTGAGTTTTC
CDS sequence (LotjaGi4g1v0041900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGCCGCCACCGCCTTGCTCCGATCCCTCCGCCGTCGCGACCTTGCCCCTTCTACTGTCTCTGCCTTCCGATCGTT TTCAGGCAGCACCAAGACAGCATATGTAGGTCGCAATTGGGCAAGTTTGTCTCGACCTTTTAGTTCAAGGCCGGCTGGTA ATGATGTCATTGGTATTGATTTGGGTACTACCAATTCATGTGTTTCTGTTATGGAGGGCAAGAATGCCAAAGTTATTGAG AATTCTGAAGGAGCAAGGACAACGCCATCAGTTGTTGCCTTCAATCAGAAAGGAGAGCTGCTTGTAGGTACACCAGCCAA GCGTCAGGCTGTGACTAACCCAACAAATACTGTCTTTGTAACCAAGAGAATGATTGGTAGGCGATTTGATGATCCCCAAA CTCAGAAGGAGATGAAGATGGTACCGTACAAAATTGTTAAGGCATCCAATGGAGATGCATGGGTTGAAGCCAACGGGAAG CAGTATTCTCCCAGCCAAATTGGTGCTTTTGTTCTCACCAAGATGAAGGAAACTGCTGAAGCGTACCTTGGAAAATCAGT TTCAAAAGCTGTGGTTACTGTACCAGCTTACTTCAATGACGCTCAGAGACAGGCTACGAAAGATGCCGGTAGAATTGCCG GTCTTGATGTCCAGAGAATTATCAATGAGCCCACTGCTGCTGCACTTTCGTATGGTATGAACAACAAAGAGGGTCTCATT GCAGTTTTTGATCTTGGAGGTGGAACATTTGATGTGTCCATCTTAGAAATTTCTAATGGAGTTTTTGAGGTTAAAGCAAC AAATGGTGACACTTTCTTGGGAGGAGAGGATTTTGATAATACTCTATTGGACTATCTAGTGAGCGAATTCAAAAGAAGTG ACAATATTGACCTTTCAAAGGATAAGCTTGCCTTGCAAAGGCTTCGAGAAGCTGCTGAGAAAGCAAAAATAGAACTGTCG TCAACATCTCAAACAGATATAAATCTTCCATTTATCACTGCTGATGCATCTGGTGCAAAGCATCTGAACATCACATTGAC TAGATCAAAGTTTGAAGCTTTAGTGAACAACTTGATTGAGAGGACAAGGGCACCATGTAAGAACTGCTTGAAGGATGCTA ACATATCTCTCAAGGATGTTGATGAGGTTCTTCTTGTTGGAGGGATGACTCGTGTACCTAAAGTACAAGAGGTTGTTCTA GAGATCTTTGGAAAGAGTCCTAGCAAAGGAGTAAATCCTGATGAGGCCGTTGCTATGGGAGCAGCTATCCAGGGCGGTAT CCTACGTGGGGATGTCAAAGAACTTCTACTCCTTGACGTAACTCCACTTTCTCTGGGTATTGAGACGTTGGGTGGTATCT TTACCAGGCTGATCAACAGGAATACAACAATCCCTACTAAAAAGAGTCAGGTGTTTTCTACAGCTGCTGACAACCAAACT CAGGTTGGTATCAAGGTGCTACAGGGTGAGCGAGAAATGGCTTCAGACAACAAAATGCTCGGCGAATTTGAGCTTAATGG CATTCCTCCCTCTCGAAGAGGTGTCCCTCAGATTGAAGTCACATTTGACATAGATGCCAATGGGATCGTTACTGTCTCTG CGAAAGACAAGGCCACCGGAAAAGAACAACAAGTCACCATCCGCTCAGACTCCAGACTCTCTGATGATGAGATTGAGAAG ATGGTCAAAGAAGCAGAGTTGCATGCTCAGAAAGACCAAGAAAGAAAGGCTCTTATTGACATCAGAAACAGTGCGGATAC ATCCATCTACAGCATTGAAAATAGCTTAAATGAGTACAGGGATAAGATTCCCAGTGAAGTGGCCAAAGAGATTGAAGATG CAGTTTCAGATTTGAGGAAGGCTATGGCAGGTGAGAATGCCGATGAGATTAAGTCAAAGCTTGATATTGCAAACAAAGCT GTGTCCAAAATCGGAGAGCACATGTCAGGTGGCAAAAGTAGCGGTCCCTCTGATGAAGGTTCTAAGGGTGAGGGCGATCA GGCCCCCGAGGCTGAGTACGAAGAGGTCAAGAAGTGA
Protein sequence (LotjaGi4g1v0041900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAATALLRSLRRRDLAPSTVSAFRSFSGSTKTAYVGRNWASLSRPFSSRPAGNDVIGIDLGTTNSCVSVMEGKNAKVIE NSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTVFVTKRMIGRRFDDPQTQKEMKMVPYKIVKASNGDAWVEANGK QYSPSQIGAFVLTKMKETAEAYLGKSVSKAVVTVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNNKEGLI AVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNTLLDYLVSEFKRSDNIDLSKDKLALQRLREAAEKAKIELS STSQTDINLPFITADASGAKHLNITLTRSKFEALVNNLIERTRAPCKNCLKDANISLKDVDEVLLVGGMTRVPKVQEVVL EIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQT QVGIKVLQGEREMASDNKMLGEFELNGIPPSRRGVPQIEVTFDIDANGIVTVSAKDKATGKEQQVTIRSDSRLSDDEIEK MVKEAELHAQKDQERKALIDIRNSADTSIYSIENSLNEYRDKIPSEVAKEIEDAVSDLRKAMAGENADEIKSKLDIANKA VSKIGEHMSGGKSSGPSDEGSKGEGDQAPEAEYEEVKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 34 | 676 | 643 | 0.0 | – | |
| PANTHER | 34 | 676 | 643 | 0.0 | ||
| CDD | 53 | 428 | 376 | 0.0 | – | |
| Hamap | 53 | 676 | 624 | 35.557 | ||
| PRINTS | 55 | 68 | 14 | 3.0E-80 | – | |
| TIGRFAM | 56 | 648 | 593 | 8.2E-284 | ||
| Pfam | 56 | 648 | 593 | 8.5E-271 | ||
| SUPERFAMILY | 56 | 236 | 181 | 4.21E-64 | ||
| Gene3D | 57 | 424 | 368 | 1.1E-159 | – | |
| ProSitePatterns | 59 | 66 | 8 | - | ||
| PRINTS | 83 | 95 | 13 | 3.0E-80 | – | |
| PRINTS | 106 | 114 | 9 | 3.0E-80 | – | |
| PRINTS | 190 | 210 | 21 | 3.0E-80 | – | |
| Gene3D | 232 | 412 | 181 | 1.1E-159 | – | |
| SUPERFAMILY | 237 | 428 | 192 | 3.21E-67 | ||
| ProSitePatterns | 242 | 255 | 14 | - | ||
| PRINTS | 248 | 258 | 11 | 3.0E-80 | – | |
| Gene3D | 275 | 362 | 88 | 1.1E-159 | – | |
| Coils | 298 | 325 | 28 | - | – | |
| PRINTS | 380 | 396 | 17 | 3.0E-80 | – | |
| ProSitePatterns | 383 | 397 | 15 | - | ||
| PRINTS | 411 | 431 | 21 | 3.0E-80 | – | |
| Gene3D | 425 | 551 | 127 | 2.0E-58 | ||
| SUPERFAMILY | 430 | 586 | 157 | 4.71E-60 | ||
| PRINTS | 434 | 453 | 20 | 3.0E-80 | – | |
| PRINTS | 515 | 531 | 17 | 3.0E-80 | – | |
| Gene3D | 553 | 651 | 99 | 1.7E-28 | ||
| Coils | 608 | 628 | 21 | - | – | |
| MobiDBLite | 641 | 678 | 38 | - | – | |
| MobiDBLite | 663 | 678 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi4g1v0041900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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