Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0041900 |
| Transcript ID | LotjaGi4g1v0041900.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone DnaK; TAIR: AT5G09590.1 mitochondrial HSO70 2; Swiss-Prot: sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial; TrEMBL-Plants: tr|V7BTF5|V7BTF5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0041900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:4944591..4947196) extracted from Lotus japonicus Gifu genome v1.2.
GTGTTTGTTGGACTTGTGTTGGTCATGTGTGGTTAGACCCATCATTATTCTGATGATAATTTCCATTGGTTGTGCAGTTT TCAGGCAGCACCAAGACAGCATATGTAGGTCGCAATTGGGCAAGTTTGTCTCGACCTTTTAGGTACCTTATGTTGTTTTG TGTTCATGTGTTACACGTATAATTATAGAAAGATATATTAATTTGGTGCTTTCGGTCTCTCACTGAATTTGCTTTGTAAA ATTTGATACTTACTACAGTTCAAGGCCGGCTGGTAATGATGTCATTGGTATTGATTTGGGTACTACCAATTCATGTGTTT CTGTTATGGAGGGCAAGGCAAGATTTTCTTATTCTTAATTTTTTTTTAATATGTTTCATTACATTGTGTTTGTGACTTTG TGTTGACTGTTGGCTAATATTTATAACAATCTCAGAATGCCAAAGTTATTGAGAATTCTGAAGGAGCAAGGACAACGCCA TCAGTTGTTGCCTTCAATCAGAAAGGAGAGCTGCTTGTAGGTACACCAGCCAAGCGTCAGGCTGTGACTAACCCAACAAA TACTGTCTTTGTAACCAAGAGAATGATTGGTAGGCGATTTGATGATCCCCAAACTCAGAAGGAGATGAAGATGGTACCGT ACAAAATTGTTAAGGCATCCAATGGAGATGCATGGGTTGAAGCCAACGGGAAGCAGTATTCTCCCAGCCAAATTGGTGCT TTTGTTCTCACCAAGATGAAGGAAACTGCTGAAGCGTACCTTGGAAAATCAGTTTCAAAAGCTGTGGTTACTGTACCAGC TTACTTCAATGACGCTCAGAGACAGGCTACGAAAGATGCCGGTAGAATTGCCGGTCTTGATGTCCAGAGAATTATCAATG AGCCCACTGCTGCTGCACTTTCGTATGGTATGAACAACAAAGAGGGTCTCATTGCAGTTTTTGATCTTGGAGGTGGAACA TTTGATGTGTCCATCTTAGAAATTTCTAATGGAGTTTTTGAGGTATGAACATTAACTTTTTAATCCTTATTTCTTTACAT CATTAGGAATCATGCGGGACATTGTTACTGATAAGATTTTGTTCAGGTTAAAGCAACAAATGGTGACACTTTCTTGGGAG GAGAGGATTTTGATAATACTCTATTGGACTATCTAGTGAGCGAATTCAAAAGAAGTGACAATATTGACCTTTCAAAGGAT AAGCTTGCCTTGCAAAGGCTTCGAGAAGCTGCTGAGAAAGCAAAAATAGAACTGTCGTCAACATCTCAAACAGATATAAA TCTTCCATTTATCACTGCTGATGCATCTGGTGCAAAGCATCTGAACATCACATTGACTAGATCAAAGTTTGAAGCTTTAG TGAACAACTTGATTGAGAGGACAAGGGCACCATGTAAGAACTGCTTGAAGGATGCTAACATATCTCTCAAGGATGTTGAT GAGGTTCTTCTTGTTGGAGGGATGACTCGTGTACCTAAAGTACAAGAGGTTGTTCTAGAGATCTTTGGAAAGAGTCCTAG CAAAGGAGTAAATCCTGATGAGGCCGTTGCTATGGGAGCAGCTATCCAGGGCGGTATCCTACGTGGGGATGTCAAAGAAC TTCTACTCCTTGACGTAACTCCACTTTCTCTGGGTATTGAGACGTTGGGTGGTATCTTTACCAGGCTGATCAACAGGAAT ACAACAATCCCTACTAAAAAGAGTCAGGTAATCCTTAAATGTTGATAATTACTTTTTCTACTTGCCAGACTCTTGAGAGG ATTGAATTCAGTCTTTCAAGAGTAATGTAACATTGAAACGACACAATTATATGCTTTGTTGAACAACCCTTCCCCCAAAT AAATAAATAAAAAAGGTATCTTACAAAAATTCAAGGTGTTAAAGCGGAGAGCCACTGAAAGTAACTACATCTCTCTCTGG TTTGTAGATAGTTTAGACATTTCAGATGTTGACTCTAAATTTTGATATCAATGTTTCAGGTGTTTTCTACAGCTGCTGAC AACCAAACTCAGGTTGGTATCAAGGTGCTACAGGGTGAGCGAGAAATGGCTTCAGACAACAAAATGCTCGGCGAATTTGA GCTTAATGGCATTCCTCCCTCTCGAAGAGGTGTCCCTCAGATTGAAGTCACATTTGACATAGATGCCAATGGGATCGTTA CTGTCTCTGCGAAAGACAAGGCCACCGGAAAAGAACAACAAGTCACCATCCGCTCAGACTCCAGACTCTCTGATGATGAG ATTGAGAAGATGGTCAAAGAAGCAGAGTTGCATGCTCAGAAAGACCAAGAAAGAAAGGCTCTTATTGACATCAGAAACAG TGCGGATACATCCATCTACAGCATTGAAAATAGCTTAAATGAGTACAGGGATAAGATTCCCAGTGAAGTGGCCAAAGAGA TTGAAGATGCAGTTTCAGATTTGAGGAAGGCTATGGCAGGTGAGAATGCCGATGAGATTAAGTCAAAGCTTGATATTGCA AACAAAGCTGTGTCCAAAATCGGAGAGCACATGTCAGGTGGCAAAAGTAGCGGTCCCTCTGATGAAGGTTCTAAGGGTGA GGGCGATCAGGCCCCCGAGGCTGAGTACGAAGAGGTCAAGAAGTGA
CDS sequence (LotjaGi4g1v0041900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTGGTAGGCGATTTGATGATCCCCAAACTCAGAAGGAGATGAAGATGGTACCGTACAAAATTGTTAAGGCATCCAA TGGAGATGCATGGGTTGAAGCCAACGGGAAGCAGTATTCTCCCAGCCAAATTGGTGCTTTTGTTCTCACCAAGATGAAGG AAACTGCTGAAGCGTACCTTGGAAAATCAGTTTCAAAAGCTGTGGTTACTGTACCAGCTTACTTCAATGACGCTCAGAGA CAGGCTACGAAAGATGCCGGTAGAATTGCCGGTCTTGATGTCCAGAGAATTATCAATGAGCCCACTGCTGCTGCACTTTC GTATGGTATGAACAACAAAGAGGGTCTCATTGCAGTTTTTGATCTTGGAGGTGGAACATTTGATGTGTCCATCTTAGAAA TTTCTAATGGAGTTTTTGAGGTTAAAGCAACAAATGGTGACACTTTCTTGGGAGGAGAGGATTTTGATAATACTCTATTG GACTATCTAGTGAGCGAATTCAAAAGAAGTGACAATATTGACCTTTCAAAGGATAAGCTTGCCTTGCAAAGGCTTCGAGA AGCTGCTGAGAAAGCAAAAATAGAACTGTCGTCAACATCTCAAACAGATATAAATCTTCCATTTATCACTGCTGATGCAT CTGGTGCAAAGCATCTGAACATCACATTGACTAGATCAAAGTTTGAAGCTTTAGTGAACAACTTGATTGAGAGGACAAGG GCACCATGTAAGAACTGCTTGAAGGATGCTAACATATCTCTCAAGGATGTTGATGAGGTTCTTCTTGTTGGAGGGATGAC TCGTGTACCTAAAGTACAAGAGGTTGTTCTAGAGATCTTTGGAAAGAGTCCTAGCAAAGGAGTAAATCCTGATGAGGCCG TTGCTATGGGAGCAGCTATCCAGGGCGGTATCCTACGTGGGGATGTCAAAGAACTTCTACTCCTTGACGTAACTCCACTT TCTCTGGGTATTGAGACGTTGGGTGGTATCTTTACCAGGCTGATCAACAGGAATACAACAATCCCTACTAAAAAGAGTCA GGTGTTTTCTACAGCTGCTGACAACCAAACTCAGGTTGGTATCAAGGTGCTACAGGGTGAGCGAGAAATGGCTTCAGACA ACAAAATGCTCGGCGAATTTGAGCTTAATGGCATTCCTCCCTCTCGAAGAGGTGTCCCTCAGATTGAAGTCACATTTGAC ATAGATGCCAATGGGATCGTTACTGTCTCTGCGAAAGACAAGGCCACCGGAAAAGAACAACAAGTCACCATCCGCTCAGA CTCCAGACTCTCTGATGATGAGATTGAGAAGATGGTCAAAGAAGCAGAGTTGCATGCTCAGAAAGACCAAGAAAGAAAGG CTCTTATTGACATCAGAAACAGTGCGGATACATCCATCTACAGCATTGAAAATAGCTTAAATGAGTACAGGGATAAGATT CCCAGTGAAGTGGCCAAAGAGATTGAAGATGCAGTTTCAGATTTGAGGAAGGCTATGGCAGGTGAGAATGCCGATGAGAT TAAGTCAAAGCTTGATATTGCAAACAAAGCTGTGTCCAAAATCGGAGAGCACATGTCAGGTGGCAAAAGTAGCGGTCCCT CTGATGAAGGTTCTAAGGGTGAGGGCGATCAGGCCCCCGAGGCTGAGTACGAAGAGGTCAAGAAGTGA
Protein sequence (LotjaGi4g1v0041900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIGRRFDDPQTQKEMKMVPYKIVKASNGDAWVEANGKQYSPSQIGAFVLTKMKETAEAYLGKSVSKAVVTVPAYFNDAQR QATKDAGRIAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNTLL DYLVSEFKRSDNIDLSKDKLALQRLREAAEKAKIELSSTSQTDINLPFITADASGAKHLNITLTRSKFEALVNNLIERTR APCKNCLKDANISLKDVDEVLLVGGMTRVPKVQEVVLEIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPL SLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKMLGEFELNGIPPSRRGVPQIEVTFD IDANGIVTVSAKDKATGKEQQVTIRSDSRLSDDEIEKMVKEAELHAQKDQERKALIDIRNSADTSIYSIENSLNEYRDKI PSEVAKEIEDAVSDLRKAMAGENADEIKSKLDIANKAVSKIGEHMSGGKSSGPSDEGSKGEGDQAPEAEYEEVKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 525 | 525 | 4.2E-235 | ||
| PANTHER | 1 | 553 | 553 | 0.0 | – | |
| SUPERFAMILY | 1 | 113 | 113 | 1.07E-35 | ||
| Gene3D | 1 | 301 | 301 | 5.8E-128 | – | |
| PANTHER | 1 | 553 | 553 | 0.0 | ||
| PRINTS | 67 | 87 | 21 | 4.6E-62 | – | |
| Gene3D | 109 | 289 | 181 | 5.8E-128 | – | |
| SUPERFAMILY | 114 | 305 | 192 | 2.27E-67 | ||
| ProSitePatterns | 119 | 132 | 14 | - | ||
| PRINTS | 125 | 135 | 11 | 4.6E-62 | – | |
| Gene3D | 152 | 239 | 88 | 5.8E-128 | – | |
| Coils | 175 | 202 | 28 | - | – | |
| PRINTS | 257 | 273 | 17 | 4.6E-62 | – | |
| ProSitePatterns | 260 | 274 | 15 | - | ||
| PRINTS | 288 | 308 | 21 | 4.6E-62 | – | |
| Gene3D | 302 | 428 | 127 | 1.5E-58 | ||
| SUPERFAMILY | 307 | 463 | 157 | 3.27E-60 | ||
| PRINTS | 311 | 330 | 20 | 4.6E-62 | – | |
| PRINTS | 392 | 408 | 17 | 4.6E-62 | – | |
| Gene3D | 430 | 528 | 99 | 1.3E-28 | ||
| Coils | 485 | 505 | 21 | - | – | |
| MobiDBLite | 518 | 555 | 38 | - | – | |
| MobiDBLite | 540 | 555 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0041900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…